RPSBLAST alignment of GI: 254780282 and protein with PDBid: 3oxn

>3oxn_A Putative transcriptional regulator, LYSR family; structural genomics, PSI-2, protein structure initiative; 2.70A {Vibrio parahaemolyticus} Length = 241

 Score = 45.0 bits (106), Expect = 2e-05
 Identities = 25/205 (12%), Positives = 50/205 (24%), Gaps = 11/205 (5%)

Query: 92  SGKLRIATTIDLGQNLLQGNLKEFLLLYPDIQIQLILDNKD--IDISMDYADCAIRLRKP 149
                IATT    Q +L   L       P++    +    D   D            R  
Sbjct: 18  DQTFTIATTDYAMQTILPFALPRIYQEAPNVSFNFLPLQHDRLSDQLTYEGADLAICRPT 77

Query: 150 IQSSSLIQRKLVTIHMHAYAAPHYLKNCREPLSIQELDKHNLITFGDLIPKCMEDFNWLA 209
                L    L  + +    +  +    +E  S+ +   H                  L 
Sbjct: 78  GPVEPLRSEILGRVGVLCLLSKQHPLANQEM-SLDDYLSHPHAMIAISDGVKALIEQALI 136

Query: 210 TVDRPIGEPRISCLQVNSYLSIMQYCVLGSGIALLPDYIVK---DNPNLVRIMEDVITPS 266
                    R   L+     + +        I  +P  +     +  +LV          
Sbjct: 137 D-----KPQRKMVLRAYHLEAALAIVDTLPIIITVPADLAYLVAERYDLVVKPLPFQFTP 191

Query: 267 FTVYFCYPEALKNTGKLKAFRNFIF 291
           F     +    +++   +  R+ + 
Sbjct: 192 FDYSMIWHARCEHSPAQEWLRSVVR 216