HHsearch alignment for GI: 254780283 and conserved domain: COG0446
>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only].
Probab=99.02 E-value=2.9e-09 Score=72.68 Aligned_cols=98 Identities=30% Similarity=0.477 Sum_probs=76.3
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCC-CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCE-
Q ss_conf 7519999897779999999998699599996788-77568750100787747777897899986643232002322211-
Q gi|254780283|r 5 DSKILIIGSGPAGYTAAIYAARAMLKPVIIAGSD-LGGQLMITESIENYPGFATSIRGDWLMEQMRQQAENFGTKIIQD- 82 (321)
Q Consensus 5 ~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~~-~GG~l~~~~~i~n~~g~~~~~~~~~l~~~~~~~~~~~~v~~~~~- 82 (321)
T Consensus 136 ~~~v~vvG~G~~gle~A~~~~~~G~~v~l~e~~~~~~~~~~~----------------~~~~~~~~~~l~~~gv~~~~~~ 199 (415)
T COG0446 136 PKDVVVVGAGPIGLEAAEAAAKRGKKVTLIEAADRLGGQLLD----------------PEVAEELAELLEKYGVELLLGT 199 (415)
T ss_pred CCEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC----------------HHHHHHHHHHHHHCCCEEECCC
T ss_conf 773999893499999999998779938999756642331121----------------8899999999997294898265
Q ss_pred EEEECCCCCCCCC---CCCCCCCCCCCCEECCCCCCCCE
Q ss_conf 3320112222222---22222222210000147766420
Q gi|254780283|r 83 LVVSVDLDRHPFL---VETQSGDLWHADAVVIATGSEVK 118 (321)
Q Consensus 83 ~V~~i~~~~~~~~---v~~~~g~~~~a~~lIiAtG~~~~ 118 (321)
T Consensus 200 ~v~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~p~ 238 (415)
T COG0446 200 KVVGVEGKGNTLVVERVVGIDGEEIKADLVIIGPGERPN 238 (415)
T ss_pred EEEEEEECCCCEEEEEEEEEEEEEECCCEEEECCCCCCC
T ss_conf 269999258621554456653035223369878975776