HHsearch alignment for GI: 254780283 and conserved domain: COG0493

>COG0493 GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only].
Probab=97.87  E-value=5.4e-06  Score=53.59  Aligned_cols=174  Identities=19%  Similarity=0.154  Sum_probs=90.1

Q ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCC-CCCCCCCC-CHHHHHHHHHHHHHHCCCCC
Q ss_conf             7675199998977-799999999986995999967887756875010078-77477778-97899986643232002322
Q gi|254780283|r    3 SHDSKILIIGSGP-AGYTAAIYAARAMLKPVIIAGSDLGGQLMITESIEN-YPGFATSI-RGDWLMEQMRQQAENFGTKI   79 (321)
Q Consensus         3 ~~~~dVvIIG~Gp-AGl~aA~~l~r~g~~v~iie~~~~GG~l~~~~~i~n-~~g~~~~~-~~~~l~~~~~~~~~~~~v~~   79 (321)
T Consensus         3 ~~~~~e~~~~~~~~~a~~~a~rCl~C~~----~C~~~--------cp~~~~IP~~~~lv~~g~-~~~a~~~i~~tn~~p~   69 (457)
T COG0493           3 PKDFREAVVGSGPEAAIYEAARCLDCGD----PCITG--------CPVHNDIPEPIGLVREGV-DHEAIKLIHKTNNLPA   69 (457)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHHCCCC----HHHHC--------CCCCCCCCCHHHHHHCCC-CHHHHHHHHHHCCCCC
T ss_conf             5454456648897999999999872995----35407--------878765777888876488-2899999986088743


Q ss_pred             CCEEEEECC--CCCCCCCCCCCCCCCCCCCEECCCCCCC-CEEEEECCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf             211332011--2222222222222222100001477664-2024652774332021012111111111221000010255
Q gi|254780283|r   80 IQDLVVSVD--LDRHPFLVETQSGDLWHADAVVIATGSE-VKWLRLESEKKFQGFGVSACATCDGFFYKNKDVIVVGGGN  156 (321)
Q Consensus        80 ~~~~V~~i~--~~~~~~~v~~~~g~~~~a~~lIiAtG~~-~~~~~ipG~~~~~~~~v~~~~~~d~~~~~~k~v~ViGgG~  156 (321)
T Consensus        70 ~~gRvcp~~~~ceg~--cv~~~~~~~v~i~~le~~i~d~~~~~g~i~~~~~--------------~~~tg~~VaviGaGP  133 (457)
T COG0493          70 ITGRVCPLGNLCEGA--CVLGIEELPVNIGALERAIGDKADREGWIPGELP--------------GSRTGKKVAVIGAGP  133 (457)
T ss_pred             CCCCCCCCCCCEEEE--CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC--------------CCCCCCEEEEECCCC
T ss_conf             106306899844641--3446677761132467555027898489788788--------------887676799988895


Q ss_pred             CCCCCEEEEECCCCCCCCCCCCCCCC-----------CCCCCCCC---CCCCCCCCCCCCCCE
Q ss_conf             65431012101333222344343322-----------11112112---235544332222311
Q gi|254780283|r  157 TAAEEALHLAKIARRVTIVHRRSSLR-----------SEKILQEK---LFLQSNIDFLFDTEV  205 (321)
Q Consensus       157 ~g~e~A~~L~~~~~~Vtli~r~~~l~-----------~~~~~~~~---~~~~~~i~~~~~~~v  205 (321)
T Consensus       134 AGl~~a~~L~~~G~~Vtv~e~~~~~GGll~yGIP~~kl~k~i~d~~i~~l~~~Gv~~~~~~~v  196 (457)
T COG0493         134 AGLAAADDLSRAGHDVTVFERVALDGGLLLYGIPDFKLPKDILDRRLELLERSGVEFKLNVRV  196 (457)
T ss_pred             HHHHCHHHHHHCCCEEEECCCCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHCCCEEEECCEE
T ss_conf             155588999868987998266677744798148446464206899999998749099986677