HHsearch alignment for GI: 254780283 and conserved domain: COG0493
>COG0493 GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only].
Probab=97.87 E-value=5.4e-06 Score=53.59 Aligned_cols=174 Identities=19% Similarity=0.154 Sum_probs=90.1
Q ss_pred CCCCEEEEECCCH-HHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCC-CCCCCCCC-CHHHHHHHHHHHHHHCCCCC
Q ss_conf 7675199998977-799999999986995999967887756875010078-77477778-97899986643232002322
Q gi|254780283|r 3 SHDSKILIIGSGP-AGYTAAIYAARAMLKPVIIAGSDLGGQLMITESIEN-YPGFATSI-RGDWLMEQMRQQAENFGTKI 79 (321)
Q Consensus 3 ~~~~dVvIIG~Gp-AGl~aA~~l~r~g~~v~iie~~~~GG~l~~~~~i~n-~~g~~~~~-~~~~l~~~~~~~~~~~~v~~ 79 (321)
T Consensus 3 ~~~~~e~~~~~~~~~a~~~a~rCl~C~~----~C~~~--------cp~~~~IP~~~~lv~~g~-~~~a~~~i~~tn~~p~ 69 (457)
T COG0493 3 PKDFREAVVGSGPEAAIYEAARCLDCGD----PCITG--------CPVHNDIPEPIGLVREGV-DHEAIKLIHKTNNLPA 69 (457)
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHCCCC----HHHHC--------CCCCCCCCCHHHHHHCCC-CHHHHHHHHHHCCCCC
T ss_conf 5454456648897999999999872995----35407--------878765777888876488-2899999986088743
Q ss_pred CCEEEEECC--CCCCCCCCCCCCCCCCCCCEECCCCCCC-CEEEEECCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 211332011--2222222222222222100001477664-2024652774332021012111111111221000010255
Q gi|254780283|r 80 IQDLVVSVD--LDRHPFLVETQSGDLWHADAVVIATGSE-VKWLRLESEKKFQGFGVSACATCDGFFYKNKDVIVVGGGN 156 (321)
Q Consensus 80 ~~~~V~~i~--~~~~~~~v~~~~g~~~~a~~lIiAtG~~-~~~~~ipG~~~~~~~~v~~~~~~d~~~~~~k~v~ViGgG~ 156 (321)
T Consensus 70 ~~gRvcp~~~~ceg~--cv~~~~~~~v~i~~le~~i~d~~~~~g~i~~~~~--------------~~~tg~~VaviGaGP 133 (457)
T COG0493 70 ITGRVCPLGNLCEGA--CVLGIEELPVNIGALERAIGDKADREGWIPGELP--------------GSRTGKKVAVIGAGP 133 (457)
T ss_pred CCCCCCCCCCCEEEE--CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC--------------CCCCCCEEEEECCCC
T ss_conf 106306899844641--3446677761132467555027898489788788--------------887676799988895
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCC-----------CCCCCCCC---CCCCCCCCCCCCCCE
Q ss_conf 65431012101333222344343322-----------11112112---235544332222311
Q gi|254780283|r 157 TAAEEALHLAKIARRVTIVHRRSSLR-----------SEKILQEK---LFLQSNIDFLFDTEV 205 (321)
Q Consensus 157 ~g~e~A~~L~~~~~~Vtli~r~~~l~-----------~~~~~~~~---~~~~~~i~~~~~~~v 205 (321)
T Consensus 134 AGl~~a~~L~~~G~~Vtv~e~~~~~GGll~yGIP~~kl~k~i~d~~i~~l~~~Gv~~~~~~~v 196 (457)
T COG0493 134 AGLAAADDLSRAGHDVTVFERVALDGGLLLYGIPDFKLPKDILDRRLELLERSGVEFKLNVRV 196 (457)
T ss_pred HHHHCHHHHHHCCCEEEECCCCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHCCCEEEECCEE
T ss_conf 155588999868987998266677744798148446464206899999998749099986677