HHsearch alignment for GI: 254780283 and conserved domain: COG2072
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].
Probab=99.95 E-value=2.5e-28 Score=183.95 Aligned_cols=180 Identities=24% Similarity=0.304 Sum_probs=136.5
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCC-EEEEECC-CCCCE----EE------EECCCCCCCCCCCC-----CCHHH
Q ss_conf 987675199998977799999999986995-9999678-87756----87------50100787747777-----89789
Q gi|254780283|r 1 MASHDSKILIIGSGPAGYTAAIYAARAMLK-PVIIAGS-DLGGQ----LM------ITESIENYPGFATS-----IRGDW 63 (321)
Q Consensus 1 M~~~~~dVvIIG~GpAGl~aA~~l~r~g~~-v~iie~~-~~GG~----l~------~~~~i~n~~g~~~~-----~~~~~ 63 (321)
T Consensus 4 ~~~~~~~v~IIGaG~sGlaaa~~L~~~g~~~~~i~Ek~~~~Gg~W~~~ry~~l~~~~p~~~~~~~~~p~~~~~~~~~~~~ 83 (443)
T COG2072 4 GVATHTDVAIIGAGQSGLAAAYALKQAGVPDFVIFEKRDDVGGTWRYNRYPGLRLDSPKWLLGFPFLPFRWDEAFAPFAE 83 (443)
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 76675548998987889999999997599867999705766786555668716767974011588888776556777643
Q ss_pred HHHHHHHHHHHCC----CCCCCE-EEEECCCCCCCCCCCCCCCCCC--CCCEECCCCCC--CCEEEEECCCCCCCEEECC
Q ss_conf 9986643232002----322211-3320112222222222222222--10000147766--4202465277433202101
Q gi|254780283|r 64 LMEQMRQQAENFG----TKIIQD-LVVSVDLDRHPFLVETQSGDLW--HADAVVIATGS--EVKWLRLESEKKFQGFGVS 134 (321)
Q Consensus 64 l~~~~~~~~~~~~----v~~~~~-~V~~i~~~~~~~~v~~~~g~~~--~a~~lIiAtG~--~~~~~~ipG~~~~~~~~v~ 134 (321)
T Consensus 84 ~~~y~~~~~~~y~~~~~i~~~~~v~~~~~~~~~~~w~V~~~~~~~~~~~a~~vV~ATG~~~~P~iP~~~G~~~f~g~~~H 163 (443)
T COG2072 84 IKDYIKDYLEKYGLRFQIRFNTRVEVADWDEDTKRWTVTTSDGGTGELTADFVVVATGHLSEPYIPDFAGLDEFKGRILH 163 (443)
T ss_pred HHHHHHHHHHHHCCEEEEECCCCEEEEEEECCCCEEEEEECCCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCCCCEEC
T ss_conf 89999999998356045021452568863058870699964887522512679983057898978887886666863444
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 2111111111221000010255654310121013332223443433
Q gi|254780283|r 135 ACATCDGFFYKNKDVIVVGGGNTAAEEALHLAKIARRVTIVHRRSS 180 (321)
Q Consensus 135 ~~~~~d~~~~~~k~v~ViGgG~~g~e~A~~L~~~~~~Vtli~r~~~ 180 (321)
T Consensus 164 S~~~~~~~~~~GKrV~VIG~GaSA~di~~~l~~~ga~vt~~qRs~~ 209 (443)
T COG2072 164 SADWPNPEDLRGKRVLVIGAGASAVDIAPELAEVGASVTLSQRSPP 209 (443)
T ss_pred CCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 1016961342788799989870399999999730671789851797