HHsearch alignment for GI: 254780283 and conserved domain: PRK01747
>PRK01747 mnmC 5-methylaminomethyl-2-thiouridine methyltransferase; Reviewed.
Probab=99.13 E-value=3.5e-10 Score=78.03 Aligned_cols=112 Identities=22% Similarity=0.245 Sum_probs=72.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCC-CC--------CEEEEECCCC------------------------
Q ss_conf 67519999897779999999998699599996788-77--------5687501007------------------------
Q gi|254780283|r 4 HDSKILIIGSGPAGYTAAIYAARAMLKPVIIAGSD-LG--------GQLMITESIE------------------------ 50 (321)
Q Consensus 4 ~~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~~-~G--------G~l~~~~~i~------------------------ 50 (321)
T Consensus 255 ~~~~VaVIGAGIAGas~A~~LA~rG~~VtVlDr~~~~A~gASGn~aG~l~P~ls~~~~~~sr~~~~a~~~a~~~~~~l~~ 334 (660)
T PRK01747 255 RNRDAAIIGGGIAGAALALALARRGWQVTLYEADEAPAQGASGNRQGALYPLLSKDDNALSRFFRAAFLFARRFYDLEAL 334 (660)
T ss_pred CCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 88718998938999999999997899689994798756556667312674025789976899999999999999998754
Q ss_pred ------CCCCC-------------------------------------------------CC--CCCHHHHHHHHHHHHH
Q ss_conf ------87747-------------------------------------------------77--7897899986643232
Q gi|254780283|r 51 ------NYPGF-------------------------------------------------AT--SIRGDWLMEQMRQQAE 73 (321)
Q Consensus 51 ------n~~g~-------------------------------------------------~~--~~~~~~l~~~~~~~~~ 73 (321)
T Consensus 335 ~~~~~~~~~Gvl~la~~e~~~~r~~~~~~~~~~~~~~~~l~~~ea~~~~g~~~~~~Gl~~p~~G~v~P~~l~~aLl~~a- 413 (660)
T PRK01747 335 GVAFDHDWCGVLQLAWDEKSAEKIAKMLEAGLPAELARALSAEEAEALAGLPVPCGGIFYPQGGWLCPAELCRALLAAA- 413 (660)
T ss_pred CCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHEECCHHHHHHHHCCCCCCCCEEECCCCEECHHHHHHHHHHHC-
T ss_conf 6864414675699549868899999999746994330247999997752998777837825897756899999999864-
Q ss_pred HCCCCCCCE-EEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCC
Q ss_conf 002322211-3320112222222222222222100001477664
Q gi|254780283|r 74 NFGTKIIQD-LVVSVDLDRHPFLVETQSGDLWHADAVVIATGSE 116 (321)
Q Consensus 74 ~~~v~~~~~-~V~~i~~~~~~~~v~~~~g~~~~a~~lIiAtG~~ 116 (321)
T Consensus 414 ~~~i~~~~~~~V~~l~~~~~~w~l~~~~~~~~~Ad~VVlA~G~~ 457 (660)
T PRK01747 414 GQGLTIHFGHEVARLERVDDQWQLDFAGGVLASAPVVVLANGHD 457 (660)
T ss_pred CCCEEEEECCEEEEEEECCCEEEEEECCCCEEECCEEEECCCCC
T ss_conf 79859992744789997498089996899286146799905610