HHsearch alignment for GI: 254780283 and conserved domain: PRK01747

>PRK01747 mnmC 5-methylaminomethyl-2-thiouridine methyltransferase; Reviewed.
Probab=99.13  E-value=3.5e-10  Score=78.03  Aligned_cols=112  Identities=22%  Similarity=0.245  Sum_probs=72.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCC-CC--------CEEEEECCCC------------------------
Q ss_conf             67519999897779999999998699599996788-77--------5687501007------------------------
Q gi|254780283|r    4 HDSKILIIGSGPAGYTAAIYAARAMLKPVIIAGSD-LG--------GQLMITESIE------------------------   50 (321)
Q Consensus         4 ~~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~~-~G--------G~l~~~~~i~------------------------   50 (321)
T Consensus       255 ~~~~VaVIGAGIAGas~A~~LA~rG~~VtVlDr~~~~A~gASGn~aG~l~P~ls~~~~~~sr~~~~a~~~a~~~~~~l~~  334 (660)
T PRK01747        255 RNRDAAIIGGGIAGAALALALARRGWQVTLYEADEAPAQGASGNRQGALYPLLSKDDNALSRFFRAAFLFARRFYDLEAL  334 (660)
T ss_pred             CCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             88718998938999999999997899689994798756556667312674025789976899999999999999998754


Q ss_pred             ------CCCCC-------------------------------------------------CC--CCCHHHHHHHHHHHHH
Q ss_conf             ------87747-------------------------------------------------77--7897899986643232
Q gi|254780283|r   51 ------NYPGF-------------------------------------------------AT--SIRGDWLMEQMRQQAE   73 (321)
Q Consensus        51 ------n~~g~-------------------------------------------------~~--~~~~~~l~~~~~~~~~   73 (321)
T Consensus       335 ~~~~~~~~~Gvl~la~~e~~~~r~~~~~~~~~~~~~~~~l~~~ea~~~~g~~~~~~Gl~~p~~G~v~P~~l~~aLl~~a-  413 (660)
T PRK01747        335 GVAFDHDWCGVLQLAWDEKSAEKIAKMLEAGLPAELARALSAEEAEALAGLPVPCGGIFYPQGGWLCPAELCRALLAAA-  413 (660)
T ss_pred             CCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHEECCHHHHHHHHCCCCCCCCEEECCCCEECHHHHHHHHHHHC-
T ss_conf             6864414675699549868899999999746994330247999997752998777837825897756899999999864-


Q ss_pred             HCCCCCCCE-EEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCC
Q ss_conf             002322211-3320112222222222222222100001477664
Q gi|254780283|r   74 NFGTKIIQD-LVVSVDLDRHPFLVETQSGDLWHADAVVIATGSE  116 (321)
Q Consensus        74 ~~~v~~~~~-~V~~i~~~~~~~~v~~~~g~~~~a~~lIiAtG~~  116 (321)
T Consensus       414 ~~~i~~~~~~~V~~l~~~~~~w~l~~~~~~~~~Ad~VVlA~G~~  457 (660)
T PRK01747        414 GQGLTIHFGHEVARLERVDDQWQLDFAGGVLASAPVVVLANGHD  457 (660)
T ss_pred             CCCEEEEECCEEEEEEECCCEEEEEECCCCEEECCEEEECCCCC
T ss_conf             79859992744789997498089996899286146799905610