HHsearch alignment for GI: 254780283 and conserved domain: PRK05945
>PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=99.64 E-value=1.2e-14 Score=104.20 Aligned_cols=114 Identities=23% Similarity=0.393 Sum_probs=70.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CCEEEEECCCCC-CEEEEE-------------C--------------------
Q ss_conf 6751999989777999999999869--959999678877-568750-------------1--------------------
Q gi|254780283|r 4 HDSKILIIGSGPAGYTAAIYAARAM--LKPVIIAGSDLG-GQLMIT-------------E-------------------- 47 (321)
Q Consensus 4 ~~~dVvIIG~GpAGl~aA~~l~r~g--~~v~iie~~~~G-G~l~~~-------------~-------------------- 47 (321)
T Consensus 2 ~e~DVLVIGsG~AGl~AA~~a~~~~~~~~V~lv~K~~~~~~~s~~a~gGi~a~~~~~~~~Ds~e~~~~Dt~k~g~~l~d~ 81 (575)
T PRK05945 2 LEHDVVIVGGGLAGCRAALEIARLDPSLDVAVVAKTHPIRSHSVAAQGGIAASLKNVDPQDSWEAHAFDTVKGSDYLADQ 81 (575)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCH
T ss_conf 40898999965999999999998789982999978899997268887889988437999989999999999864688889
Q ss_pred ---------------CCC--C---------------CCCC-------CCCCCHHHHHHHHHHHHHHCCCCCCCE-EEEEC
Q ss_conf ---------------007--8---------------7747-------777897899986643232002322211-33201
Q gi|254780283|r 48 ---------------SIE--N---------------YPGF-------ATSIRGDWLMEQMRQQAENFGTKIIQD-LVVSV 87 (321)
Q Consensus 48 ---------------~i~--n---------------~~g~-------~~~~~~~~l~~~~~~~~~~~~v~~~~~-~V~~i 87 (321)
T Consensus 82 ~lv~~l~~~~~~~v~~Le~~Gv~f~r~~dG~~~~~~~gGhs~~R~~~~~~~tG~~i~~~L~~~~~~~gv~i~~~~~v~~L 161 (575)
T PRK05945 82 DAVAILTQEAPDVIIDLEHLGVLFSRLPDGRIAQRAFGGHSHNRTCYAADKTGHAILHELVNNLRRYGVTIYDEWYVMRL 161 (575)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEE
T ss_conf 99999999999999999986997760889888011036710255545688839999999999985469789941788889
Q ss_pred CCCCCCC----CCCCCCC--CCCCCCEECCCCCCCC
Q ss_conf 1222222----2222222--2221000014776642
Q gi|254780283|r 88 DLDRHPF----LVETQSG--DLWHADAVVIATGSEV 117 (321)
Q Consensus 88 ~~~~~~~----~v~~~~g--~~~~a~~lIiAtG~~~ 117 (321)
T Consensus 162 l~~dg~v~Ga~~~~~~~G~~~~i~AkaVVlATGG~~ 197 (575)
T PRK05945 162 ILEENEAKGVVMYHIADGRLEVVRAKAVMFATGGYG 197 (575)
T ss_pred EEECCEEEEEEEEECCCCCEEEEECCEEEECCCCCC
T ss_conf 870997899999971688389998998998999987