HHsearch alignment for GI: 254780283 and conserved domain: PRK06481
>PRK06481 fumarate reductase flavoprotein subunit; Validated.
Probab=99.58 E-value=2.9e-14 Score=101.88 Aligned_cols=113 Identities=26% Similarity=0.408 Sum_probs=71.5
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCC-CCCE-------EEEEC---------------------------
Q ss_conf 767519999897779999999998699599996788-7756-------87501---------------------------
Q gi|254780283|r 3 SHDSKILIIGSGPAGYTAAIYAARAMLKPVIIAGSD-LGGQ-------LMITE--------------------------- 47 (321)
Q Consensus 3 ~~~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~~-~GG~-------l~~~~--------------------------- 47 (321)
T Consensus 58 ~~~yDVvVVG~G~AGl~AAi~Aae~Ga~VvllEK~~~~GG~s~~s~g~~~~~~t~~q~~~G~~ds~~~~~~d~~~~~~~~ 137 (506)
T PRK06481 58 KDKYDIVIVGAGGAGMTAAIEAKDAGMNPVILEKMPVAGGNTMKASSGMNASETKFQKAQGIADSNDKFYEETLKGGGGT 137 (506)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCEECCCCHHHHHHCCCCCHHHHHHHHHHHCCCC
T ss_conf 69846799898899999999999889978999689999951888558845269999997389999999999999734888
Q ss_pred ------------------CCC-------CC--CC-CC-------CC--CCHHHHHHHHHHHHHHCCCCCCCE-EEEECCC
Q ss_conf ------------------007-------87--74-77-------77--897899986643232002322211-3320112
Q gi|254780283|r 48 ------------------SIE-------NY--PG-FA-------TS--IRGDWLMEQMRQQAENFGTKIIQD-LVVSVDL 89 (321)
Q Consensus 48 ------------------~i~-------n~--~g-~~-------~~--~~~~~l~~~~~~~~~~~~v~~~~~-~V~~i~~ 89 (321)
T Consensus 138 ~d~~l~~~~~~~s~~~idWl~~~G~~~~~~~~~g~~~~~~~~~~~~g~~~g~~lv~~l~~~~~~~gv~i~~~t~~~~L~~ 217 (506)
T PRK06481 138 NDKALLRYFVDNSASAIDWLDSMGIKLDNLTITGGMSEKRTHRPHDGSAVGGYLVDGLLKNVQERKIPLFVNADVTKITE 217 (506)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEECCEEEEEEE
T ss_conf 88999999998389999999975984666766788776703434887647999999999999877987998778323230
Q ss_pred CCCCC---CCCCCCCC--CCCCCEECCCCCC
Q ss_conf 22222---22222222--2210000147766
Q gi|254780283|r 90 DRHPF---LVETQSGD--LWHADAVVIATGS 115 (321)
Q Consensus 90 ~~~~~---~v~~~~g~--~~~a~~lIiAtG~ 115 (321)
T Consensus 218 ~dG~V~GV~~~~~~g~~~~i~akaVILATGG 248 (506)
T PRK06481 218 KDGKVTGVKVKINGKETKTISSKAVVVTTGG 248 (506)
T ss_pred CCCCEEEEEEEECCCEEEEEECCEEEECCCC
T ss_conf 5893789999968984999973569997788