HHsearch alignment for GI: 254780283 and conserved domain: PRK08020
>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed.
Probab=99.47 E-value=5.3e-13 Score=94.48 Aligned_cols=117 Identities=16% Similarity=0.237 Sum_probs=80.4
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCC---C------EEE---E----------------------E
Q ss_conf 9876751999989777999999999869959999678877---5------687---5----------------------0
Q gi|254780283|r 1 MASHDSKILIIGSGPAGYTAAIYAARAMLKPVIIAGSDLG---G------QLM---I----------------------T 46 (321)
Q Consensus 1 M~~~~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~~~G---G------~l~---~----------------------~ 46 (321)
T Consensus 1 M~~~~~DV~IvG~G~vGl~lAl~La~~G~~V~viE~~~~~~~~~~~~~d~R~~al~~~s~~~L~~lGvw~~~~~~~~~~~ 80 (391)
T PRK08020 1 MTNQPTEIAIVGGGMVGGALALGLAQHGFSVAVIEHAAPAPFVADSQPDVRISAISAASVALLKGLGVWDAVQAMRCHPY 80 (391)
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCHHHHHHHCCCCE
T ss_conf 99999848999936999999999986699789994899876665579873389878899999998888487786256871
Q ss_pred CCC--CCCCC----C-------C---CCCCHHHHHHHHHHHHHHC-CCCCCCE-EEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 100--78774----7-------7---7789789998664323200-2322211-33201122222222222222221000
Q gi|254780283|r 47 ESI--ENYPG----F-------A---TSIRGDWLMEQMRQQAENF-GTKIIQD-LVVSVDLDRHPFLVETQSGDLWHADA 108 (321)
Q Consensus 47 ~~i--~n~~g----~-------~---~~~~~~~l~~~~~~~~~~~-~v~~~~~-~V~~i~~~~~~~~v~~~~g~~~~a~~ 108 (321)
T Consensus 81 ~~~~~~~~~~~~~~f~~~~~~~~~lg~~v~~~~l~~~L~~~l~~~~~v~~~~~~~v~~i~~~~~~~~v~l~~g~~i~a~l 160 (391)
T PRK08020 81 RRLETWEWETAHVVFDAAELKLPELGYMVENRVLQQALWQALEAHPNVTLRVPASLIALHRHDDGWELELADGETIQAKL 160 (391)
T ss_pred EEEEEECCCCCEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCCEEEEEECCCCEEEECE
T ss_conf 48986127885587254432897540121269999999999983899699958802688974986899948999998379
Q ss_pred ECCCCCCCC
Q ss_conf 014776642
Q gi|254780283|r 109 VVIATGSEV 117 (321)
Q Consensus 109 lIiAtG~~~ 117 (321)
T Consensus 161 vIgADG~~S 169 (391)
T PRK08020 161 VIGADGANS 169 (391)
T ss_pred EEEECCCCC
T ss_conf 999079970