HHsearch alignment for GI: 254780283 and conserved domain: PRK08773
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated.
Probab=99.39 E-value=3.2e-12 Score=89.95 Aligned_cols=117 Identities=19% Similarity=0.296 Sum_probs=78.4
Q ss_pred CCCCC-CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC--------CCEEEE-------------------------E
Q ss_conf 98767-5199998977799999999986995999967887--------756875-------------------------0
Q gi|254780283|r 1 MASHD-SKILIIGSGPAGYTAAIYAARAMLKPVIIAGSDL--------GGQLMI-------------------------T 46 (321)
Q Consensus 1 M~~~~-~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~~~--------GG~l~~-------------------------~ 46 (321)
T Consensus 1 m~~~~~~DV~IvGaGp~Gl~lA~~L~~~G~~v~liE~~~~~~~~~~~~~~R~~al~~~s~~~L~~lGl~~~i~~~~~~p~ 80 (392)
T PRK08773 1 MSRRSRRDAVIVGGGVVGAACALALADAGLSVALVEGREPPRWQADQPDLRVYAFAADNAALLDRLGVWPAVRAARVQPY 80 (392)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCHHHHHHCCCCCE
T ss_conf 99999998899990699999999998669978999178987555688873699998899999998798166775167731
Q ss_pred CCC--CCC-----CCCCC----------CCCHHHHHHHHHHHHHHCCCCCCCE-EEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 100--787-----74777----------7897899986643232002322211-33201122222222222222221000
Q gi|254780283|r 47 ESI--ENY-----PGFAT----------SIRGDWLMEQMRQQAENFGTKIIQD-LVVSVDLDRHPFLVETQSGDLWHADA 108 (321)
Q Consensus 47 ~~i--~n~-----~g~~~----------~~~~~~l~~~~~~~~~~~~v~~~~~-~V~~i~~~~~~~~v~~~~g~~~~a~~ 108 (321)
T Consensus 81 ~~~~v~d~~~~~~~~~~~~~~~~~~lg~iv~~~~l~~~L~~~~~~~~v~~~~~~~v~~~~~~~~~v~v~~~dg~~i~a~l 160 (392)
T PRK08773 81 RRMRVWDAGGGGELGFDADTLGREQLGWIVENDLLVDRLWAAVHAAGIQLHCPARVVELEQDADGVRLRLDDGSRLEAAL 160 (392)
T ss_pred EEEEEEECCCCCEEEECHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEECCCEEEEEEECCCEEEEEECCCCEEEEEE
T ss_conf 35899845898347536566285456532254999999999986089989748689999966985899977997999889
Q ss_pred ECCCCCCCC
Q ss_conf 014776642
Q gi|254780283|r 109 VVIATGSEV 117 (321)
Q Consensus 109 lIiAtG~~~ 117 (321)
T Consensus 161 vVgaDG~~S 169 (392)
T PRK08773 161 AIAADGAAS 169 (392)
T ss_pred EEECCCCCC
T ss_conf 998378874