HHsearch alignment for GI: 254780283 and conserved domain: PRK12770
>PRK12770 putative glutamate synthase subunit beta; Provisional.
Probab=100.00 E-value=0 Score=337.59 Aligned_cols=303 Identities=25% Similarity=0.277 Sum_probs=207.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCE
Q ss_conf 76751999989777999999999869959999678877568750100787747777897899986643232002322211
Q gi|254780283|r 3 SHDSKILIIGSGPAGYTAAIYAARAMLKPVIIAGSDLGGQLMITESIENYPGFATSIRGDWLMEQMRQQAENFGTKIIQD 82 (321)
Q Consensus 3 ~~~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~~~GG~l~~~~~i~n~~g~~~~~~~~~l~~~~~~~~~~~~v~~~~~ 82 (321)
T Consensus 15 ~~gkkV~IIGaGPaGlsAA~~aa~~G~~v~viEk~~~~GG~~~~----gip~~~--~p~~~~~-~~~~~l~~~g~~~~~~ 87 (350)
T PRK12770 15 PTGKKVAIIGAGPAGLAAAGYLACLGHEVHVYDKLPEPGGLMVF----GIPEFR--IPIERVR-EGVRELEELGVVFHTR 87 (350)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEE----EECCCC--CCHHHHH-HHHHHHHHHCCEEECC
T ss_conf 89798999995588999999999789985999536969828998----347976--6688999-9999999709769732
Q ss_pred E-EEE----CCCCCCCCCCCC--CCCCCCCCCEECCCCCC-CCEEEEECCCCCCC------------EEECCCCCCCCCC
Q ss_conf 3-320----112222222222--22222210000147766-42024652774332------------0210121111111
Q gi|254780283|r 83 L-VVS----VDLDRHPFLVET--QSGDLWHADAVVIATGS-EVKWLRLESEKKFQ------------GFGVSACATCDGF 142 (321)
Q Consensus 83 ~-V~~----i~~~~~~~~v~~--~~g~~~~a~~lIiAtG~-~~~~~~ipG~~~~~------------~~~v~~~~~~d~~ 142 (321)
T Consensus 88 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~daviiAtG~~~~r~l~ipG~~~~gv~~~~~~l~~~~~~~~~~~~~~~~~ 167 (350)
T PRK12770 88 TKVYCDEPPHEEEGDEFVEDFVSLEELVEEYDAVLIATGTWKSRKLGIPGENLPGVYSALEYLFRIRAARLGYLPWEKVP 167 (350)
T ss_pred EEEEEECCEEEEECCEEEEEEEEHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 09985020113303203577601898774189999965899773589887456780864787877653435335534466
Q ss_pred CCCCCCEEEEECCCCCCCCEEEEECCCC-CCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC-
Q ss_conf 1122100001025565431012101333-222344343322--111121122355443322223112114864333444-
Q gi|254780283|r 143 FYKNKDVIVVGGGNTAAEEALHLAKIAR-RVTIVHRRSSLR--SEKILQEKLFLQSNIDFLFDTEVVDVIGSIPEPPLF- 218 (321)
Q Consensus 143 ~~~~k~v~ViGgG~~g~e~A~~L~~~~~-~Vtli~r~~~l~--~~~~~~~~~~~~~~i~~~~~~~v~~i~g~~~~~~~~- 218 (321)
T Consensus 168 ~~~gk~vvVvGgG~~a~e~A~~~~~~Ga~~v~l~~r~~~~~~~~~~~~~~~l-~~~gv~~~~~~~~~~i~~~~~v~~v~~ 246 (350)
T PRK12770 168 PVEGKKVVVVGAGLTAVDAALEAKLLGAEKVYMAYRRTINEAPAGKYEIERL-IERGVEFLELVTPVRIIGEGKVEAVEL 246 (350)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCHHCCCCCHHHHHHH-HHCCCEEEECCCEEEEECCCCEEEEEE
T ss_conf 5589889998986456799999997599689999666500286189999999-976988997452299982796789999
Q ss_pred -------CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC-CCCEECCCCEEEECCCCCCCCCCEEEECCCCCC
Q ss_conf -------443331420321000001122221112322356567742-561806997990088855478982897012688
Q gi|254780283|r 219 -------PSVSGVRLHNKKEGNFFERNVDGIFIAIGYKPNTKIFRH-QLKMTNTNYIWTMPDSTATSIPGIFAAGDVADE 290 (321)
Q Consensus 219 -------~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~~~~-~~~~~~~g~i~~~~~~~~Ts~p~Iya~GDv~~~ 290 (321)
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~g~~~~i~~D~vlvavG~~P~~~~~~~~gv~ld~~G~I~-vd~~~~TsvpgIyAaGDv~~g 325 (350)
T PRK12770 247 AKMRLGEPDESGRPRPEPIPGSEFVLEADTVITAIGEIPTPPFKKELGIELNRDGEIK-VDEKHMTSREGVFAAGDVVTG 325 (350)
T ss_pred EEEEECCCCCCCCEEEEEECCCCEEECCCEEEEEECCCCCCCHHHHCCEEECCCCEEE-ECCCCEECCCCEEEEECCCCC
T ss_conf 9988605666774553121374103105789999777788413541591288998198-698974489999980168788
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4456789999799999999999974
Q gi|254780283|r 291 RYRQAITAAAMGCMAALEVEHYLSI 315 (321)
Q Consensus 291 ~~~~~~~A~~~G~~Aa~~i~~yl~~ 315 (321)
T Consensus 326 ~-~~a~~A~~eG~~AA~~i~~yL~g 349 (350)
T PRK12770 326 P-SKIGKALKSGLRAAQSIHEWLLG 349 (350)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 8-89999999999999999998776