HHsearch alignment for GI: 254780283 and conserved domain: TIGR00275
>TIGR00275 TIGR00275 conserved hypothetical protein TIGR00275; InterPro: IPR004792 This is a family of conserved hypothetical proteins that may include proteins with a dinucleotide-binding motif (Rossman fold), including oxidoreductases and dehydrogenases..
Probab=94.87 E-value=0.057 Score=30.11 Aligned_cols=106 Identities=20% Similarity=0.409 Sum_probs=64.3
Q ss_pred EEECCCHHHHHHHHHHHHCC--CCEEEEECCC-CC--------CEEEE-------ECCCCCCC--C--------------
Q ss_conf 99989777999999999869--9599996788-77--------56875-------01007877--4--------------
Q gi|254780283|r 9 LIIGSGPAGYTAAIYAARAM--LKPVIIAGSD-LG--------GQLMI-------TESIENYP--G-------------- 54 (321)
Q Consensus 9 vIIG~GpAGl~aA~~l~r~g--~~v~iie~~~-~G--------G~l~~-------~~~i~n~~--g-------------- 54 (321)
T Consensus 1 ~~~g~g~~g~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~ggg~c~~~~~~~~p~~~~~~~p~gg~~~~~~~~~~~~~~ 80 (411)
T TIGR00275 1 IVVGGGAAGLFCAANCARLGPEGRVLLLDNGKKPGRKVLLSGGGRCNFTNLCVDPGAYLSQNPRGGHFLKGALARFTPWD 80 (411)
T ss_pred CEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHEEECCCCCEEEEEEECCCHHHHHCCCCCCHHHHHHHHHCCCHH
T ss_conf 91236301356666654226554068862574100000112785100000100504665237765225665665313213
Q ss_pred --------------------CCCCCCHHHHHHHHHHHHHHCCCCCCCE-EEEECCCCCCC----CCCCCCCCCCCCCCEE
Q ss_conf --------------------7777897899986643232002322211-33201122222----2222222222210000
Q gi|254780283|r 55 --------------------FATSIRGDWLMEQMRQQAENFGTKIIQD-LVVSVDLDRHP----FLVETQSGDLWHADAV 109 (321)
Q Consensus 55 --------------------~~~~~~~~~l~~~~~~~~~~~~v~~~~~-~V~~i~~~~~~----~~v~~~~g~~~~a~~l 109 (321)
T Consensus 81 ~~~~~~~~g~~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 159 (411)
T TIGR00275 81 FIALVGAEGVALHEKALGQLFPCDDGAGQIVDCLLSECDKGGVELRLRSEVLGLEKLENGEKVRFTLQL-NGTVWGCEGL 159 (411)
T ss_pred HHHHHHHCCCEEHHHHCCCEECCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCEEEEEEEC-CCCEEECCCC
T ss_conf 555553114200011025310356644689999887553226213210023344430256404443300-3100000231
Q ss_pred CCCCCC
Q ss_conf 147766
Q gi|254780283|r 110 VIATGS 115 (321)
Q Consensus 110 IiAtG~ 115 (321)
T Consensus 160 ~~~~g~ 165 (411)
T TIGR00275 160 IIATGG 165 (411)
T ss_pred EEECCC
T ss_conf 231365