HHsearch alignment for GI: 254780283 and conserved domain: TIGR01316
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric; InterPro: IPR006004 One pathway for the assimilation of ammonia and glutamate biosynthesis involves homotetrameric glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate . 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. .
Probab=100.00 E-value=0 Score=337.75 Aligned_cols=294 Identities=27% Similarity=0.351 Sum_probs=228.3
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEC-CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 87675199998977799999999986995999967-88775687501007877477778978999866432320023222
Q gi|254780283|r 2 ASHDSKILIIGSGPAGYTAAIYAARAMLKPVIIAG-SDLGGQLMITESIENYPGFATSIRGDWLMEQMRQQAENFGTKII 80 (321)
Q Consensus 2 ~~~~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~-~~~GG~l~~~~~i~n~~g~~~~~~~~~l~~~~~~~~~~~~v~~~ 80 (321)
T Consensus 139 p~t~~kVAViGaGPAGL~cA~elAk~Gh~VtvfEALhKPGGV~~-----YGIPefRLp---Kei~~~E~k~LkklGv~fr 210 (462)
T TIGR01316 139 PSTKKKVAVIGAGPAGLACASELAKKGHEVTVFEALHKPGGVLA-----YGIPEFRLP---KEIVETEVKKLKKLGVKFR 210 (462)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEEE-----ECCCCCCCC---HHHHHHHHHHHHHCCEEEE
T ss_conf 88887799984682146889999747986999971489985675-----368885487---5788988887632663799
Q ss_pred CEEEEECCCCCCCCCCCCCCC-CCCCCCEECCCCCC-CCEEEEECCCCCCCEEECC------------CCCCCCCCCCCC
Q ss_conf 113320112222222222222-22210000147766-4202465277433202101------------211111111122
Q gi|254780283|r 81 QDLVVSVDLDRHPFLVETQSG-DLWHADAVVIATGS-EVKWLRLESEKKFQGFGVS------------ACATCDGFFYKN 146 (321)
Q Consensus 81 ~~~V~~i~~~~~~~~v~~~~g-~~~~a~~lIiAtG~-~~~~~~ipG~~~~~~~~v~------------~~~~~d~~~~~~ 146 (321)
T Consensus 211 ~~~lvGkt-------~TL~eL~~~YGfDAVFIgtGAG~pkl~NipG~~L~gvysA~dfLtR~nLmKAyefp~~dtPv~~g 283 (462)
T TIGR01316 211 TDYLVGKT-------VTLEELLEKYGFDAVFIGTGAGLPKLLNIPGEELKGVYSANDFLTRVNLMKAYEFPKKDTPVEVG 283 (462)
T ss_pred ECCEECCC-------HHHHHHHHHCCCCEEEEEECCCCCEECCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEC
T ss_conf 44375051-------12888887519707999506898700167843434002234688777776542366788756544
Q ss_pred CCEEEEECCCCCCCCEEEEECCCCC-CCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC----
Q ss_conf 1000010255654310121013332-22344343322--1111211223554433222231121148643334444----
Q gi|254780283|r 147 KDVIVVGGGNTAAEEALHLAKIARR-VTIVHRRSSLR--SEKILQEKLFLQSNIDFLFDTEVVDVIGSIPEPPLFP---- 219 (321)
Q Consensus 147 k~v~ViGgG~~g~e~A~~L~~~~~~-Vtli~r~~~l~--~~~~~~~~~~~~~~i~~~~~~~v~~i~g~~~~~~~~~---- 219 (321)
T Consensus 284 K~vvviGgGntAvD~artAlRLGaEqvh~~YRrtRedmtAr~EEi~h-a~eEGVkfhfl~Qpve~iGdE~G~V~avkf~~ 362 (462)
T TIGR01316 284 KKVVVIGGGNTAVDAARTALRLGAEQVHVVYRRTREDMTAREEEIKH-AEEEGVKFHFLLQPVEVIGDEEGEVKAVKFEK 362 (462)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHH-HHHCCCEEEEEECCEEEEECCCCEEEEEEEEE
T ss_conf 76899878536787776664528423699885477751366999998-85389289987421689865765189999885
Q ss_pred ------CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC--CCCEECCCCEEEECCCCCCCCCCEEEECCCCCCC
Q ss_conf ------43331420321000001122221112322356567742--5618069979900888554789828970126884
Q gi|254780283|r 220 ------SVSGVRLHNKKEGNFFERNVDGIFIAIGYKPNTKIFRH--QLKMTNTNYIWTMPDSTATSIPGIFAAGDVADER 291 (321)
Q Consensus 220 ------~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~~~~--~~~~~~~g~i~~~~~~~~Ts~p~Iya~GDv~~~~ 291 (321)
T Consensus 363 ~~~~E~~dsg~~r~~p~~~~e~~leaD~VI~AiG~~~Npi~~e~~r~lkt~~~GTIv-VdE~~~TsipGVfAGGD~i~G~ 441 (462)
T TIGR01316 363 TELLEERDSGEKRKVPVTDEEVKLEADAVIVAIGQEANPIIAEDSRSLKTSKRGTIV-VDEDLETSIPGVFAGGDVIRGE 441 (462)
T ss_pred CCCCCHHHCCCCEEEECCCCCEEEEECEEEEEECCCCCCEEEECCCEEEECCCCCEE-ECCCCCCCCCCEEECCCEEECC
T ss_conf 376881145781243049951788626599974589883033067333345886578-7476304767574267277458
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4567899997999999999999
Q gi|254780283|r 292 YRQAITAAAMGCMAALEVEHYL 313 (321)
Q Consensus 292 ~~~~~~A~~~G~~Aa~~i~~yl 313 (321)
T Consensus 442 -atVi~Amg~GkrAAk~I~eYl 462 (462)
T TIGR01316 442 -ATVILAMGDGKRAAKAIDEYL 462 (462)
T ss_pred -CEEEEECCCCHHHHHHHHHCC
T ss_conf -669985003568999874229