>TIGR01318 gltD_gamma_fam glutamate synthase, small subunit; InterPro: IPR006006 One pathway for the assimilation of ammonia and glutamate biosynthesis involves glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate. 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including Escherichia coli. ; GO: 0016639 oxidoreductase activity acting on the CH-NH2 group of donors NAD or NADP as acceptor, 0006537 glutamate biosynthetic process.

Probab=100.00 E-value=0 Score=298.51 Aligned_cols=295 Identities=23% Similarity=0.296 Sum_probs=221.4 Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECC-CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC Q ss_conf 876751999989777999999999869959999678-8775687501007877477778978999866432320023222 Q gi|254780283|r 2 ASHDSKILIIGSGPAGYTAAIYAARAMLKPVIIAGS-DLGGQLMITESIENYPGFATSIRGDWLMEQMRQQAENFGTKII 80 (321) Q Consensus 2 ~~~~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~-~~GG~l~~~~~i~n~~g~~~~~~~~~l~~~~~~~~~~~~v~~~ 80 (321) T Consensus 140 ~~~g~rVAviGAGPAGLaCAD~L~RaGV~v~VfDRhP~iGGLLt-----FGIPsFKLd---K~V~~~Rr~if~~MGi~F~ 211 (480) T TIGR01318 140 KPTGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLT-----FGIPSFKLD---KAVLSRRREIFTAMGIEFK 211 (480) T ss_pred CCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCC-----CCCCCHHHH---HHHHHHHHHHHHHCCCEEE T ss_conf 00782789977886025799987517855999747703076013-----688851102---7899999999975892786 Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCE-EEEECCCCCCC-----------EEECCCCC--------CCC Q ss_conf 11332011222222222222222210000147766420-24652774332-----------02101211--------111 Q gi|254780283|r 81 QDLVVSVDLDRHPFLVETQSGDLWHADAVVIATGSEVK-WLRLESEKKFQ-----------GFGVSACA--------TCD 140 (321) Q Consensus 81 ~~~V~~i~~~~~~~~v~~~~g~~~~a~~lIiAtG~~~~-~~~ipG~~~~~-----------~~~v~~~~--------~~d 140 (321) T Consensus 212 Ln~EvGrD~-------~l~~L-Le~YDAVFlGvGTY~~~~ggLP~eDa~GV~~ALPFLianTr~lmGl~eyGrPiaGw~~ 283 (480) T TIGR01318 212 LNTEVGRDI-------SLDDL-LEDYDAVFLGVGTYRSMRGGLPGEDAPGVLKALPFLIANTRQLMGLPEYGRPIAGWEP 283 (480) T ss_pred CCCEEECCC-------CHHHH-HHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCC T ss_conf 581650325-------55444-3114848961143343128778877421666424776615212378887774467776 Q ss_pred --CC-CCCCCCEEEEECCCCCCCCEEEEECC-CCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCEEECCCCCCC Q ss_conf --11-11221000010255654310121013-332223443433221--1112112235544332222311211486433 Q gi|254780283|r 141 --GF-FYKNKDVIVVGGGNTAAEEALHLAKI-ARRVTIVHRRSSLRS--EKILQEKLFLQSNIDFLFDTEVVDVIGSIPE 214 (321) Q Consensus 141 --~~-~~~~k~v~ViGgG~~g~e~A~~L~~~-~~~Vtli~r~~~l~~--~~~~~~~~~~~~~i~~~~~~~v~~i~g~~~~ 214 (321) T Consensus 284 ~~P~~~~~Gk~VVVLGGGDTaMDCvRTaiR~GA~~VTC~YRRDE~nMPGSrrEV~NA-REEGV~F~FnvQP~~i~~~~~~ 362 (480) T TIGR01318 284 EEPLIDVEGKRVVVLGGGDTAMDCVRTAIRLGAKKVTCAYRRDEANMPGSRREVANA-REEGVEFLFNVQPLEIELDEDG 362 (480) T ss_pred CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHCCC-HHCCCEEEEEECCEEEEECCCC T ss_conf 677423477668985888752578899998177613126653677878775552661-1117113210031588877888 Q ss_pred ----------CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCH-HHHHC-CCCEECCCCEEEE---C---CCCCC Q ss_conf ----------34444433314203210000011222211123223565-67742-5618069979900---8---88554 Q gi|254780283|r 215 ----------PPLFPSVSGVRLHNKKEGNFFERNVDGIFIAIGYKPNT-KIFRH-QLKMTNTNYIWTM---P---DSTAT 276 (321) Q Consensus 215 ----------~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~-~~~~~-~~~~~~~g~i~~~---~---~~~~T 276 (321) T Consensus 363 ~~~Gv~~~~t~~GEPDA~GRRrp~pv~GSE~vl~ADvvI~AFGF~P~~~pWL~~~gi~~ds~GrI~~~lsd~~~~~~~QT 442 (480) T TIGR01318 363 KVIGVKLVRTKLGEPDAKGRRRPEPVAGSEFVLPADVVIMAFGFSPHAMPWLAEHGITLDSWGRIITALSDEGSDLQYQT 442 (480) T ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCHHHHCCEEECCCCCEEECCCCCCCCCCCCC T ss_conf 52335652356678677768777104786515146558971067898864445177556346327751345567765335 Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 78982897012688445678999979999999999997 Q gi|254780283|r 277 SIPGIFAAGDVADERYRQAITAAAMGCMAALEVEHYLS 314 (321) Q Consensus 277 s~p~Iya~GDv~~~~~~~~~~A~~~G~~Aa~~i~~yl~ 314 (321) T Consensus 443 ~~PKiFAGGD~v-RGaDLVVTA~aeGR~AA~gi~~wL~ 479 (480) T TIGR01318 443 SNPKIFAGGDAV-RGADLVVTAVAEGRKAAQGILDWLG 479 (480) T ss_pred CCCCEECCCCCE-ECCCHHHHHHHHHHHHHHHHHHHHC T ss_conf 688475167701-4672200066766899999999854

HHsearch alignment for GI: 254780283 and conserved domain: TIGR01318