HHsearch alignment for GI: 254780283 and conserved domain: TIGR01350
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase; InterPro: IPR006258 These sequences represent dihydrolipoamide dehydrogenase, a flavoprotein that acts in a number of ways. It is the E3 component of dehydrogenase complexes for pyruvate, 2-oxoglutarate, 2-oxoisovalerate, and acetoin. It can also serve as the L protein of the glycine cleavage system. This family includes a few members known to have distinct functions (ferric leghemoglobin reductase and NADH:ferredoxin oxidoreductase) but that may be predicted by homology to act as dihydrolipoamide dehydrogenase as well. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulphide. ; GO: 0004148 dihydrolipoyl dehydrogenase activity, 0050660 FAD binding, 0006118 electron transport.
Probab=98.97 E-value=4.5e-09 Score=71.59 Aligned_cols=104 Identities=24% Similarity=0.338 Sum_probs=81.7
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCCCCE-
Q ss_conf 751999989777999999999869959999678877568750100787747777897899986643232002-322211-
Q gi|254780283|r 5 DSKILIIGSGPAGYTAAIYAARAMLKPVIIAGSDLGGQLMITESIENYPGFATSIRGDWLMEQMRQQAENFG-TKIIQD- 82 (321)
Q Consensus 5 ~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~~~GG~l~~~~~i~n~~g~~~~~~~~~l~~~~~~~~~~~~-v~~~~~- 82 (321)
T Consensus 178 P~slvIiGGGVIG~EfA~~f~~lG~~VTv~E~~d---rIL--------p~~D-----~evSk~~~~~L~~~GNv~i~~~~ 241 (481)
T TIGR01350 178 PESLVIIGGGVIGVEFASIFASLGVKVTVIEMLD---RIL--------PGED-----AEVSKVVKKKLKKKGNVKILTNA 241 (481)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC---CCC--------CCCC-----HHHHHHHHHHHHHCCCEEEECCC
T ss_conf 8566998786677889999985398089994575---003--------5431-----68999999999744984985485
Q ss_pred EEE--ECCCCCCCCC--CCCCCC---CCCCCCEECCCCCCCCEEEEEC--CCCC
Q ss_conf 332--0112222222--222222---2221000014776642024652--7743
Q gi|254780283|r 83 LVV--SVDLDRHPFL--VETQSG---DLWHADAVVIATGSEVKWLRLE--SEKK 127 (321)
Q Consensus 83 ~V~--~i~~~~~~~~--v~~~~g---~~~~a~~lIiAtG~~~~~~~ip--G~~~ 127 (321)
T Consensus 242 ~V~~~~~~~~~~~v~~~~~~~g~ge~~~~~~e~vLvavGR---~pn~~~~GLe~ 292 (481)
T TIGR01350 242 KVTGAAVEKNDDQVVVEVELEGKGEVETLTAEKVLVAVGR---KPNTEGLGLEK 292 (481)
T ss_pred EEECCEEEECCCEEEEEEEECCCCCEEEEEEEEEEEEECC---CCCCCCCCEEE
T ss_conf 4423357752878999999879980588987399998424---34767646021