>TIGR01372 soxA sarcosine oxidase, alpha subunit family; InterPro: IPR006277 This set of sequences describe the alpha subunit of a family of known and putative heterotetrameric sarcosine oxidases. Five operons of such oxidases are found in Mesorhizobium loti and three in Agrobacterium tumefaciens, a high enough copy number to suggest that not all members share the same function. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate . Bacterial sarcosine oxidases have been isolated from over a dozen different organisms and fall into two major classes (1) monomeric form that contains only covalent flavin and (2) heterotetrameric (alpha, beta, gamma, delta) form that contain a covalent and noncovalent flavin, this entry represents the heterotetrameric form. ; GO: 0008115 sarcosine oxidase activity, 0046653 tetrahydrofolate metabolic process.

Probab=99.93 E-value=1.6e-25 Score=167.57 Aligned_cols=294 Identities=18% Similarity=0.213 Sum_probs=189.7 Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEE-CCCCCCEEEEEC-CCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCCC Q ss_conf 67519999897779999999998699599996-788775687501-00787747777897899986643232002-3222 Q gi|254780283|r 4 HDSKILIIGSGPAGYTAAIYAARAMLKPVIIA-GSDLGGQLMITE-SIENYPGFATSIRGDWLMEQMRQQAENFG-TKII 80 (321) Q Consensus 4 ~~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie-~~~~GG~l~~~~-~i~n~~g~~~~~~~~~l~~~~~~~~~~~~-v~~~ 80 (321) T Consensus 175 ~HCDVLVVGaGPAGLAAA~aAa~~GArViL~DE~~~~GGsL~~~~g~~------IDG~PA~~W~~~t~aeL~a~~~v~~L 248 (1026) T TIGR01372 175 AHCDVLVVGAGPAGLAAALAAARAGARVILVDEQAEAGGSLLSEAGET------IDGKPAADWAAATVAELEALPEVTLL 248 (1026) T ss_pred EECCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC------CCCCCHHHHHHHHHHHHHCCCCEEEC T ss_conf 320478878896799999999647988999706765777556778760------17801899999999997418981674 Q ss_pred CE-EEEECCCCCCCCCC------CC---CCCC------CCCCCEECCCCCCCCEEEEECCCCCCCEEECCCCC--CCCCC Q ss_conf 11-33201122222222------22---2222------22100001477664202465277433202101211--11111 Q gi|254780283|r 81 QD-LVVSVDLDRHPFLV------ET---QSGD------LWHADAVVIATGSEVKWLRLESEKKFQGFGVSACA--TCDGF 142 (321) Q Consensus 81 ~~-~V~~i~~~~~~~~v------~~---~~g~------~~~a~~lIiAtG~~~~~~~ipG~~~~~~~~v~~~~--~~d~~ 142 (321) T Consensus 249 ~RTT~~G~YD~N-~~g~~ER~~DHL~~P~~g~~ReRlWrvRAkrvVLA~GA~ERPlVF~nND~PGvM-lA~A~~~YlnRy 326 (1026) T TIGR01372 249 PRTTAFGYYDHN-TVGALERVTDHLDAPAKGVPRERLWRVRAKRVVLATGALERPLVFANNDRPGVM-LAGAARTYLNRY 326 (1026) T ss_pred CCCCEEEEECCC-EEEEEEEHHCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCHHH-HHHHHHHHHHHH T ss_conf 354055451477-478762011366778874853305777253456605764477868831953233-367999988875 Q ss_pred C-CCCCCEEEEECCCCCCCCEEEEECCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC-CCCCCCC Q ss_conf 1-122100001025565431012101333222-344343322111121122355443322223112114864-3334444 Q gi|254780283|r 143 F-YKNKDVIVVGGGNTAAEEALHLAKIARRVT-IVHRRSSLRSEKILQEKLFLQSNIDFLFDTEVVDVIGSI-PEPPLFP 219 (321) Q Consensus 143 ~-~~~k~v~ViGgG~~g~e~A~~L~~~~~~Vt-li~r~~~l~~~~~~~~~~~~~~~i~~~~~~~v~~i~g~~-~~~~~~~ 219 (321) T Consensus 327 gV~pG~r~v~~TnNDSAy~~A~dL~~AG~~vvAi~D~R~~~--~p~~~~~A-r~~g~~v~~G~~V~~t~G~kdrv~~~~- 402 (1026) T TIGR01372 327 GVAPGKRIVVATNNDSAYRAAADLAEAGLAVVAIVDARADV--SPELVAEA-REAGIEVIKGHAVAATEGGKDRVSGVK- 402 (1026) T ss_pred CCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCC--CHHHHHHH-HHCCCEEEECCCEEECCCCCCCEEEEE- T ss_conf 00548705898217358999999996489506999617887--52479999-875985986450221257721010468- Q ss_pred CCCCEEECC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHC-CC--CEEC--CCCEEEECCCCCCCCCCEEEECCCCCCCHH Q ss_conf 433314203-21000001122221112322356567742-56--1806--997990088855478982897012688445 Q gi|254780283|r 220 SVSGVRLHN-KKEGNFFERNVDGIFIAIGYKPNTKIFRH-QL--KMTN--TNYIWTMPDSTATSIPGIFAAGDVADERYR 293 (321) Q Consensus 220 ~~~~v~~~~-~~~g~~~~i~~D~vi~a~G~~pn~~~~~~-~~--~~~~--~g~i~~~~~~~~Ts~p~Iya~GDv~~~~~~ 293 (321) T Consensus 403 -V~r~~~~~~~~~g~~~~~~aD~LlvSGGw~P~vHL~Sq~~GK~~W~~~~~AFlP-~~PtqkW~~~~~~~AGA~~G~~g- 479 (1026) T TIGR01372 403 -VARVDLGTDRESGAEERLDADALLVSGGWSPVVHLASQAGGKLAWDEARAAFLP-GTPTQKWAVQGCILAGAVNGLFG- 479 (1026) T ss_pred -EEEECCHHCCCCCCCCEEEEEEEEECCCCCCHHHHHHCCCCCCCCCHHHHCCCC-CCCCCCCCCCCEEEEEEEECCHH- T ss_conf -886244001135785247853898727766212220005883430133431586-67554436677278530001010- Q ss_pred HHHHHHHHHHHHHHHHHHHH Q ss_conf 67899997999999999999 Q gi|254780283|r 294 QAITAAAMGCMAALEVEHYL 313 (321) Q Consensus 294 ~~~~A~~~G~~Aa~~i~~yl 313 (321) T Consensus 480 -l~a~l~dG~~~G~~aA~~~ 498 (1026) T TIGR01372 480 -LAAALADGAAAGAAAARAA 498 (1026) T ss_pred -HHHHHHHHHHHHHHHHHHC T ss_conf -7999999999999999861

HHsearch alignment for GI: 254780283 and conserved domain: TIGR01372