HHsearch alignment for GI: 254780283 and conserved domain: TIGR02028
>TIGR02028 ChlP geranylgeranyl reductase; InterPro: IPR011774 This entry represents the reductase which acts reduces the geranylgeranyl group to the phytyl group in the side chain of chlorophyll. It is unclear whether the enzyme has a preference for acting before or after the attachment of the side chain to chlorophyllide a by chlorophyll synthase. This clade is restricted to plants and cyanobacteria to separate it from the homologues which act in the biosynthesis of bacteriochlorophyll..
Probab=98.63 E-value=1.7e-07 Score=62.36 Aligned_cols=83 Identities=24% Similarity=0.513 Sum_probs=51.3
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECC-----CCCCEEEEECCCCC--CC-----------------------C--
Q ss_conf 1999989777999999999869959999678-----87756875010078--77-----------------------4--
Q gi|254780283|r 7 KILIIGSGPAGYTAAIYAARAMLKPVIIAGS-----DLGGQLMITESIEN--YP-----------------------G-- 54 (321)
Q Consensus 7 dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~-----~~GG~l~~~~~i~n--~~-----------------------g-- 54 (321)
T Consensus 2 RVAVvGGGPAG~sAAE~LA~aG~~~~L~ER~~~~aKPCGGAI-PLCMv~EF~lP~d~iDRRV~kMk~~SPSN~~~d~gr~ 80 (401)
T TIGR02028 2 RVAVVGGGPAGASAAETLAKAGIQTFLLERKLDNAKPCGGAI-PLCMVDEFDLPRDIIDRRVTKMKMISPSNIAVDIGRT 80 (401)
T ss_pred EEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC-CCCCCCHHCCCHHHHHCCCCEEEEECCCCHHHHHHCC
T ss_conf 588974897416899999850310463320567887788864-4120101037866751211022421641013320002
Q ss_pred CC----CCCCHHHHHHH-HHHHHHHCCCCCCCEEEEECCCC
Q ss_conf 77----77897899986-64323200232221133201122
Q gi|254780283|r 55 FA----TSIRGDWLMEQ-MRQQAENFGTKIIQDLVVSVDLD 90 (321)
Q Consensus 55 ~~----~~~~~~~l~~~-~~~~~~~~~v~~~~~~V~~i~~~ 90 (321)
T Consensus 81 L~~~~yIgM~RREVLDsflR~RA~~~GA~li~Glv~~l~~P 121 (401)
T TIGR02028 81 LKEHEYIGMVRREVLDSFLRERAADAGATLINGLVLKLELP 121 (401)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCEEEEECCC
T ss_conf 78876125145788889999999864881414445763177