HHsearch alignment for GI: 254780285 and conserved domain: COG0008
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis].
Probab=99.10 E-value=1.6e-09 Score=85.71 Aligned_cols=114 Identities=24% Similarity=0.218 Sum_probs=61.8
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCC
Q ss_conf 22222102465213568889999997522555433367776136899999999972266345115311011012211000
Q gi|254780285|r 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 (586)
Q Consensus 319 ~~d~vl~rsDGt~~Y~t~DiA~~~~k~e~~~d~~iyVv~~~Q~~h~~~v~~~~~~lg~~~~~~~~~~~~~v~l~~dg~~~ 398 (586)
T Consensus 181 ~~d-v~~r~dg~ptY~---favvvDD~~mgITHv--iRG~d~~~nt~~q~~l~~~lg~~~P~~~H~~--li~~-~~g~-- 249 (472)
T COG0008 181 PDF-VILRYDGYPTYN---FAVVVDDHLMGITHV--LRGEDHLDNTPRQIWLYEALGWPPPVYAHLP--LLLN-EDGK-- 249 (472)
T ss_pred CCC-EEECCCCCCCCC---EEEEECHHHCCCCEE--EECHHHCCCCHHHHHHHHHCCCCCCCEEEEE--EEEC-CCCC--
T ss_conf 756-042477774543---002610321688637--7344420478999999997399998279751--0466-8878--
Q ss_pred CCCCCCCCHHHHHHHHHH----------H-----HH--H---------HHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 001223302456777776----------3-----21--1---------234555420001233344777653
Q gi|254780285|r 399 KMSKRAGDFITLRHVVDE----------V-----GS--D---------SVRFMMLWRKNSELLDFDFCKVKE 444 (586)
Q Consensus 399 kmstR~G~~v~l~dll~e----------v-----g~--~---------aiky~~L~~~~~~~~~Fd~d~~l~ 444 (586)
T Consensus 250 kLSKr~~-~~~~~~~~~~G~~~~al~~~~allg~~~~~~~~e~f~~e~~i~~fd~~~~~ks~a~fd~~kL~~ 320 (472)
T COG0008 250 KLSKRKG-AVSIGEYRVEGWLPPALPNLLALLGRGYPPEAIEIFSLEEGIKWFDLTIVSKSPAAFDRKKLDW 320 (472)
T ss_pred EECCCCC-CCCCCHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 3047667-6653025551889388999999846889820699989999875511210211610136877676