HHsearch alignment for GI: 254780285 and conserved domain: PRK00133
>PRK00133 metG methionyl-tRNA synthetase; Reviewed.
Probab=99.80 E-value=1.7e-16 Score=134.66 Aligned_cols=344 Identities=19% Similarity=0.237 Sum_probs=200.3
Q ss_pred CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 41000223443224411777778568999999998506664102014775314555678987532221024500066011
Q gi|254780285|r 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 (586)
Q Consensus 121 ~kVvVE~sSpNp~KplHVGHlRsaiIGdsi~ril~~~G~~V~r~nyvgD~G~Q~~~li~~~~~~~~~~~~~~~~~~~e~~ 200 (586)
T Consensus 2 k~~~iTt~ipY~Ng~~HiGH~~~~i~aDv~aRy~Rl~G~~v~f~~GtDeHG~~i~~~A~~------~------------- 62 (666)
T PRK00133 2 RKILVTCALPYANGPIHLGHLLEYIQADIWVRYQRMRGHEVLFVCADDAHGTPIMLKAEK------E------------- 62 (666)
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHH------C-------------
T ss_conf 877981798788898431246769999999999983699549847427884899999998------5-------------
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHCCHHHHHHHHHHH
Q ss_conf 02410000127888887576413430237999999978998875455588708752100015887301045799999999
Q gi|254780285|r 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280 (586)
Q Consensus 201 ~~~~y~~~~~~e~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~l~i~fD~~~~Es~~~~~~~~~i~~~i~~l 280 (586)
T Consensus 63 ----------------------g~t----p~---e~-~d~~~~~~~~~~~~l~Is~D~f~rTt~~~--h~~~vq~~f~~l 110 (666)
T PRK00133 63 ----------------------GIT----PE---EL-IARYHAEHKRDFAGFGISFDNYGSTHSEE--NRELAQEIYLKL 110 (666)
T ss_pred ----------------------CCC----HH---HH-HHHHHHHHHHHHHHCCCCCCCCCCCCCHH--HHHHHHHHHHHH
T ss_conf ----------------------999----99---99-99999999999998399578785789889--999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCC------------------------------------------------CCCCCCEEEE
Q ss_conf 9749851134267555654200------------------------------------------------0247815651
Q gi|254780285|r 281 ARQGYVYEGILPPPKSKTTQKC------------------------------------------------DMDRKQLLFR 312 (586)
Q Consensus 281 ~~~g~~~e~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~ 312 (586)
T Consensus 111 ~~~G~iy~~~~~~~Yc~~~e~fl~Dr~V~GtCP~C~~~~~~GD~Ce~cG~~~~p~eL~~p~~~~~g~~~e~~~~e~~ff~ 190 (666)
T PRK00133 111 KENGYIYERTIEQLYDPEKGMFLPDRFVKGTCPKCGAEDQYGDNCEVCGATYSPTELINPKSAISGATPVLKESEHFFFK 190 (666)
T ss_pred HHCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEECCCCHHHH
T ss_conf 97899897403555668756552542342025777871204874224565167344238643457985166035333313
Q ss_pred HHHCCCCCCCCCCCCCCCHHHH-----------HHHHHHH---HH-HHH--CCCCCCCCCC-------------------
Q ss_conf 0110222222210246521356-----------8889999---99-752--2555433367-------------------
Q gi|254780285|r 313 STMVGDDVDRPLLKSDGSYTYF-----------AADLAYF---KC-KYE--RGFDNMIYVM------------------- 356 (586)
Q Consensus 313 ~~~~g~~~d~vl~rsDGt~~Y~-----------t~DiA~~---~~-k~e--~~~d~~iyVv------------------- 356 (586)
T Consensus 191 Ls~~~~~L~~-~~~~~~~~~~~~n~~~~~l~~gL~D~~ISR~~~W~GipvP~~~~kv~YVW~DA~igYis~t~~~~~~~~ 269 (666)
T PRK00133 191 LPDFEEFLKE-WTRSGALQPNVANKMKEWLEEGLQDWDISRDAPYFGFEIPGAPGKVFYVWLDAPIGYISSTKNLCDKRG 269 (666)
T ss_pred HHHHHHHHHH-HHCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEECCCCCCEEEEEEECCCHHHHHHHHHHCCCCC
T ss_conf 8777789987-510488987899999999857887753040278444588898764899961564537776443314356
Q ss_pred -------------------CCCHHHHHHHHH--HHHHHHCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf -------------------776136899999--99997226634511531101101221100000122330245677777
Q gi|254780285|r 357 -------------------GSDHSGYVKRLE--AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 (586)
Q Consensus 357 -------------------~~~Q~~h~~~v~--~~~~~lg~~~~~~~~~~~~~v~l~~dg~~~kmstR~G~~v~l~dll~ 415 (586)
T Consensus 270 ~~~~~~W~~d~~~~~vhfiGKD-ii~FH~i~wPa~L~~~g~~lP~-~v~~hg~l~~--~G~--KmSKS~Gnvv~p~~~l~ 343 (666)
T PRK00133 270 LDWDEYWKKDSDTELYHFIGKD-IIYFHTLFWPAMLEGAGYRLPT-NVFAHGFLTV--EGA--KMSKSRGTFIWARTYLD 343 (666)
T ss_pred CCHHHCCCCCCCCCEEEECCCC-HHHHHHHHHHHHHHHCCCCCCC-CCCCCCCEEE--CCE--EEECCCCEEEEHHHHHH
T ss_conf 5587638899876336753443-1146476799999846778886-1211464877--880--60012671761799998
Q ss_pred HHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHCCCCHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 63211234555420001--23334477765320244367-8888888899998753320024683223422355211499
Q gi|254780285|r 416 EVGSDSVRFMMLWRKNS--ELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492 (586)
Q Consensus 416 evg~~aiky~~L~~~~~--~~~~Fd~d~~l~~~~~nt~~-YiqYa~aR~~SIlrKa~~~~~~~~~~~~~~~~~~~~~~~~ 492 (586)
T Consensus 344 ~yg~D~lRY~l~~~~p~~~~D~dfs~~~~~~r~NsdLan~lGNl-~~R~~~~~~k~~~g-------~vp~---------~ 406 (666)
T PRK00133 344 HLDPDYLRYYLAAKLPSRIDDIDFNWEDFQQRVNSDLVGKLVNF-ASRAAGFINKRFDG-------KLPD---------E 406 (666)
T ss_pred HCCCCCEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCC-------CCCC---------C
T ss_conf 66964530203310789876778699999999868888766689-99999999986599-------7899---------7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 89999999984218999999985281279999999999889998706
Q gi|254780285|r 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 (586)
Q Consensus 493 ~~E~~L~~~l~~f~~vi~~a~~~~~P~~l~~Yl~~La~~Fn~fY~~~ 539 (586)
T Consensus 407 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~Al~~i~~l~~~~NkYi~~~ 453 (666)
T PRK00133 407 LADPELLEEFRAAAESIAEAYEAREFRKALREIMALADRANKYVDDK 453 (666)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 45899999999999999999981069999999999999998887744