HHsearch alignment for GI: 254780285 and conserved domain: PRK12410
>PRK12410 glutamyl-tRNA synthetase; Provisional.
Probab=99.31 E-value=2e-11 Score=99.15 Aligned_cols=129 Identities=21% Similarity=0.305 Sum_probs=72.0
Q ss_pred CCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCHH-HHHHHHHHHHHHHCC
Q ss_conf 2000247815651011022222221024652135688899999975225554333--6777613-689999999997226
Q gi|254780285|r 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY--VMGSDHS-GYVKRLEAVAAAVSE 376 (586)
Q Consensus 300 ~~~~~~~~~~~~~~~~~g~~~d~vl~rsDGt~~Y~t~DiA~~~~k~e~~~d~~iy--Vv~~~Q~-~h~~~v~~~~~~lg~ 376 (586)
T Consensus 148 ~~~D~v~G~i~~~~~~~~---D~Vi~R~DG~ptY~l---a~VV----DD~~m~IThViRGeDhl~nT~kQi-~l~~aLg~ 216 (433)
T PRK12410 148 SFTDAIKGELSFEPDEID---SFVILRQDKTPTYNF---ACAV----DDMLYDISFIIRGEDHVSNTPKQI-LIREALGY 216 (433)
T ss_pred EEEECCCCEECCCCCCCC---CEEEEECCCCEEEEE---EEEE----CCCCCCCCEEECCHHHHHHHHHHH-HHHHHCCC
T ss_conf 886344753415811058---748993489835642---2796----488787400264285999999999-99998699
Q ss_pred CCC-CCEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHHHHH-------------HHH----------HHHHHHHHHHCCH
Q ss_conf 634-5115311011012211000001223302456777776-------------321----------1234555420001
Q gi|254780285|r 377 KKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------VGS----------DSVRFMMLWRKNS 432 (586)
Q Consensus 377 ~~~-~~~~~~~~~v~l~~dg~~~kmstR~G~~v~l~dll~e-------------vg~----------~aiky~~L~~~~~ 432 (586)
T Consensus 217 ~~P~~~~H~pl--i-~~~~g~--kLSKR~g~~-~i~~yre~GylPeAl~NyLalLG~~~~~Eifs~~eli~~Fdl~~i~k 290 (433)
T PRK12410 217 NKPITYAHLPI--I-LNEEGK--KMSKRDNAS-SVKWLLEQGFLPEAIANYLILLGNKTPKEIFTLDEAIEWFDIENISK 290 (433)
T ss_pred CCCCEEECCCC--E-ECCCCC--CCCCCCCCC-CHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEHHCCCC
T ss_conf 99852532010--0-189998--556668983-88889767987599999999828999733146898844551600578
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 2333447776532
Q gi|254780285|r 433 ELLDFDFCKVKEQ 445 (586)
Q Consensus 433 ~~~~Fd~d~~l~~ 445 (586)
T Consensus 291 s~A~FD~~KL~wl 303 (433)
T PRK12410 291 SPAKFDLKKLRQL 303 (433)
T ss_pred CCCCCCHHHHHHH
T ss_conf 8884899999999