HHsearch alignment for GI: 254780285 and conserved domain: PRK12451
>PRK12451 arginyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=1007.57 Aligned_cols=527 Identities=25% Similarity=0.363 Sum_probs=439.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEE
Q ss_conf 98689999999999999986048882122452774178801274110489998888289979999999983457897314
Q gi|254780285|r 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80 (586)
Q Consensus 1 M~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~i~ve~p~~~~~GD~~~n~a~~lAK~~kk~P~~iA~~i~~~l~~~~~i~~ 80 (586)
T Consensus 1 m~~k~~~~~~~~~~~~~~~~~-----~~~~-~~ie~P~~~~~GD~s~~-a~~LAK~lk~~P~~IA~~I~~~l~-~~~i~~ 72 (562)
T PRK12451 1 MDYKTQFAESLSNIFTNELTQ-----KQIL-DLIETPKQDEFGDAAFP-CFSLAKQYKKAPAIIAKEVAEKLS-DPFFTK 72 (562)
T ss_pred CCHHHHHHHHHHHHHHHHCCH-----HHHH-HHCCCCCCCCCHHHHHH-HHHHHHHHCCCHHHHHHHHHHHCC-CCCCCE
T ss_conf 976899999999998602799-----8988-86228989985307889-999998869799999999998467-675066
Q ss_pred EEEECCCEEEEEECHHHHHH-HHHHHHHCCHHCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 88547976878888889999-99999856221388765655410002234432244117777785689999999985066
Q gi|254780285|r 81 VFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 (586)
Q Consensus 81 vevagpGfIN~~l~~~~~~~-~l~~i~~~~~~yG~~~~~~~~kVvVE~sSpNp~KplHVGHlRsaiIGdsi~ril~~~G~ 159 (586)
T Consensus 73 veiagP-fiN~~l~~~~~~~~~l~~i~~~~~~yG~~~~~~~k~v~vEfvSaNPtgpLHVGH~R~aiiGdsLariL~~~G~ 151 (562)
T PRK12451 73 VEAVGP-YVNVFFNRETVSDAVLKTILAEKEEYGQNHFGCEKTVVIDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGY 151 (562)
T ss_pred EEEECC-EEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 998378-7899998899999999999853663287757899879998528999988624224627999999999998698
Q ss_pred CCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHH-----HHHHHHHHHHHHHHHC--CCCHHHHHH
Q ss_conf 641020147753145556789875322210245000660110241000-----0127888887576413--430237999
Q gi|254780285|r 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK-----HVGKELADKYSSELLN--FPEEKWLPI 232 (586)
Q Consensus 160 ~V~r~nyvgD~G~Q~~~li~~~~~~~~~~~~~~~~~~~e~~~~~~y~~-----~~~~e~~~~~~~~~~~--~~e~~~~~~ 232 (586)
T Consensus 152 ~V~reyYinD~G~Qi~~l~~~~~~~~~~~~~~~~---~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~~le~~d~~-~~~ 227 (562)
T PRK12451 152 EVVGINYIGDWGTQFGKLITAYKKWGNEAVVKED---PIRELFKLYVQFHEEVKDDEELEEEGRAWFKKLEEGDEE-AVE 227 (562)
T ss_pred EEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCC---CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHH-HHH
T ss_conf 5999997477308999999999985440112467---578999999999986504800689999999987668999-999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 99997899887545558870875210001588730104579999999997498511342675556542000247815651
Q gi|254780285|r 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 (586)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~l~i~fD~~~~Es~~~~~~~~~i~~~i~~l~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 312 (586)
T Consensus 228 ~~~~~~~~~l~~~~~~l~~l~v~fD~~~~Es~~~----~~~~~~i~~L~~~g~~~e----------------~dGA~~~~ 287 (562)
T PRK12451 228 LWNWFRHESLKEFSRIYELLGVEFTNFQGEAFYN----NLMEDFIGILEEHDLLEE----------------SEGALVVN 287 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHH----HHHHHHHHHHHHCCCEEE----------------CCCCEECC
T ss_conf 9999999999999999999297201452324451----247899999997797894----------------79974358
Q ss_pred HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC-CCCEEEECCHHH
Q ss_conf 01102222222102465213568889999997522-5554333677761368999999999722663-451153110110
Q gi|254780285|r 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK-AQINVLLCELVR 390 (586)
Q Consensus 313 ~~~~g~~~d~vl~rsDGt~~Y~t~DiA~~~~k~e~-~~d~~iyVv~~~Q~~h~~~v~~~~~~lg~~~-~~~~~~~~~~v~ 390 (586)
T Consensus 288 ~~~~g-~~~~vl~ksDGt~tY~t~DiA~~~~k~~~~~~d~~I~V~gadh~~~~~rv~a~l~~lg~~~~~~~~hv~~~~v~ 366 (562)
T PRK12451 288 LEEEG-MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFNQFFTVLKKLGYTWVDGMEHVPFGFIL 366 (562)
T ss_pred CCHHC-CCCEEEECCCCCCEEECCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEE
T ss_conf 71312-78638991899721316647899999873099758999567476799999999997499754550689889987
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHH-------------------------HHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 12211000001223302456777776-------------------------32112345554200012333447776532
Q gi|254780285|r 391 LYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 (586)
Q Consensus 391 l~~dg~~~kmstR~G~~v~l~dll~e-------------------------vg~~aiky~~L~~~~~~~~~Fd~d~~l~~ 445 (586)
T Consensus 367 --~~g~--kMStR~G~~v~l~dll~e~~~~a~~~~~~r~~~~~~~~~ia~~VG~~Airy~~L~~~~~~~~~FD~d~~~~~ 442 (562)
T PRK12451 367 --KDGK--KMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENMLKF 442 (562)
T ss_pred --CCCC--CEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHC
T ss_conf --4886--302057875689999999999999998752777132899999853113013444316787776789999742
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 02443678888888899998753320024683223422355211499899999999842189999999852812799999
Q gi|254780285|r 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 (586)
Q Consensus 446 ~~~nt~~YiqYa~aR~~SIlrKa~~~~~~~~~~~~~~~~~~~~~~~~~~E~~L~~~l~~f~~vi~~a~~~~~P~~l~~Yl 525 (586)
T Consensus 443 -~~~~~PYiQYAhARi~SIlrk~~~~~~---~--~------~~~l~~~~e~~Li~~L~~fp~vv~~aa~~~~Ph~l~~Yl 510 (562)
T PRK12451 443 -EGETGPYVQYTHARACSILRKESVEFE---T--C------TFALKDDHSWSVVKLLNKFPQVIEAAFNKNEPSVISKYV 510 (562)
T ss_pred -CCCCCHHHHHHHHHHHHHHHHCCCCCC---C--C------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf -578873699999999999974457755---4--3------344699799999999998899999999849937999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 999998899987068666665435787899999999999999999998731587985445
Q gi|254780285|r 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 (586)
Q Consensus 526 ~~La~~Fn~fY~~~~~~~~~~v~~~~~~~~~~~RL~L~~a~~~vL~~~L~LLGI~~perM 585 (586)
T Consensus 511 ~~LA~~Fh~fY~~~~------Vl~~-~-~~~~aRL~L~~a~~~vl~ngL~LLGI~ape~M 562 (562)
T PRK12451 511 LDVAQSFNKYYGNVR------ILEE-S-AEKDSRLALVYAVTVVLKEGLRLLGVEAPEEM 562 (562)
T ss_pred HHHHHHHHHHHCCCC------CCCC-C-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 999999999980687------7899-5-65899999999999999997432298855579