HHsearch alignment for GI: 254780285 and conserved domain: PRK13804
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional.
Probab=99.12 E-value=8.6e-09 Score=80.61 Aligned_cols=170 Identities=18% Similarity=0.232 Sum_probs=114.8
Q ss_pred CCCCCCCCHH-HHHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 3336777613-689999999997226634511531101101221100000122330245677777632112345554200
Q gi|254780285|r 352 MIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 (586)
Q Consensus 352 ~iyVv~~~Q~-~h~~~v~~~~~~lg~~~~~~~~~~~~~v~l~~dg~~~kmstR~G~~v~l~dll~evg~~aiky~~L~~~ 430 (586)
T Consensus 591 D~y~eG~Dq~rgWF~s~l~~s~~~~~~~Pfk~v~~hG~V-lDe~G~--KMSKS~GNvvdP~~ii~~yGADalRl~~as~~ 667 (966)
T PRK13804 591 DLYLEGSDQHRGWFHSSLLESCGTRGRAPYKAVLTHGFT-LDEKGE--KMSKSLGNVVDPQDVIKQSGADILRLWVASVD 667 (966)
T ss_pred CEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCEE-ECCCCC--CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC
T ss_conf 168625418886999999874220688774510341168-988988--88787889899899998729218889998477
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 01233344777653202443678888888899998753320024683223422355211499899999999842189999
Q gi|254780285|r 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 (586)
Q Consensus 431 ~~~~~~Fd~d~~l~~~~~nt~~YiqYa~aR~~SIlrKa~~~~~~~~~~~~~~~~~~~~~~~~~~E~~L~~~l~~f~~vi~ 510 (586)
T Consensus 668 ~~~d~~~~~~~l~~~-~~-~--~-----~ki~Nt~rf~l~nl~~f~~~----~~~~~-~~l~~~D~wil~~l~~~~~~v~ 733 (966)
T PRK13804 668 YQDDQRIGKEILKTN-AE-T--Y-----RKLRNTLRWMLGTLAHFDPG----EAVAY-ADLPELERLMLHRLNELDATVR 733 (966)
T ss_pred CCCCCCCCHHHHHHH-HH-H--H-----HHHHHHHHHHHHHHCCCCCC----CCCCH-HHCCHHHHHHHHHHHHHHHHHH
T ss_conf 544634568999999-99-9--9-----99999999999864279832----34892-2352878999999999999999
Q ss_pred HHHHHCCCHHHHHHHHHHHH-HHHHHHHH
Q ss_conf 99985281279999999999-88999870
Q gi|254780285|r 511 NATIAQEPYKLAFYLYDLAS-VFHGHWSH 538 (586)
Q Consensus 511 ~a~~~~~P~~l~~Yl~~La~-~Fn~fY~~ 538 (586)
T Consensus 734 ~~~~~Y~f~~a~~~l~~F~~~dLs~~Yle 762 (966)
T PRK13804 734 KAYEAFDFKTIYKALVNFMTVDLSAFYFD 762 (966)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98511359999999999999878799998