HHsearch alignment for GI: 254780285 and conserved domain: PRK13804
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional.
Probab=98.74 E-value=1.2e-07 Score=72.52 Aligned_cols=134 Identities=18% Similarity=0.303 Sum_probs=82.3
Q ss_pred CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 41000223443224411777778568999999998506664102014775314555678987532221024500066011
Q gi|254780285|r 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 (586)
Q Consensus 121 ~kVvVE~sSpNp~KplHVGHlRsaiIGdsi~ril~~~G~~V~r~nyvgD~G~Q~~~li~~~~~~~~~~~~~~~~~~~e~~ 200 (586)
T Consensus 54 ~~f~~~dGPPyanG~lH~GHaln~tikDii~Rykrm~G~~V~~~~GwD~hGLPiE~~vek---~l~~-~~~~~~------ 123 (966)
T PRK13804 54 PKFVLHDGPPYANGNIHIGHALNKILKDVIVRSKQMLGFDANYVPGWDCHGLPIEWKIEE---KYRA-KGKNKD------ 123 (966)
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH---HHHH-CCCCHH------
T ss_conf 976995799999998612255666899999999874899668999768887899999999---7765-289823------
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHCC---HHHHHHHH
Q ss_conf 024100001278888875764134302379999999789988754555887087521000158873010---45799999
Q gi|254780285|r 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD---PSPIRDII 277 (586)
Q Consensus 201 ~~~~y~~~~~~e~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~l~i~fD~~~~Es~~~~~~---~~~i~~~i 277 (586)
T Consensus 124 ----------------------~~~~~~f~~~cr~~-a~~~i~~~~~q~~rlG~~~DW---~~~y~T~dp~y~~~~~~~F 177 (966)
T PRK13804 124 ----------------------EVPLNEFRKECREY-ALSWIDVQREEFKRLGVIGDW---ENPYTTMDFHAEARIAREF 177 (966)
T ss_pred ----------------------HCCHHHHHHHHHHH-HHHHHHHHHHHHHHHCEEECC---CCCCCCCCHHHHHHHHHHH
T ss_conf ----------------------38999999999999-999999999999982920225---8984228989999999999
Q ss_pred HHHHHCCCCCCCC
Q ss_conf 9999749851134
Q gi|254780285|r 278 DNLARQGYVYEGI 290 (586)
Q Consensus 278 ~~l~~~g~~~e~~ 290 (586)
T Consensus 178 ~~l~ekGliYr~~ 190 (966)
T PRK13804 178 MKFAAKGQLYRGS 190 (966)
T ss_pred HHHHHCCCEEECC
T ss_conf 9999879988438