HHsearch alignment for GI: 254780285 and conserved domain: pfam09334
>pfam09334 tRNA-synt_1g tRNA synthetases class I (M). This family includes methionyl tRNA synthetases.
Probab=99.73 E-value=2.3e-16 Score=133.73 Aligned_cols=264 Identities=20% Similarity=0.284 Sum_probs=143.3
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC
Q ss_conf 00223443224411777778568999999998506664102014775314555678987532221024500066011024
Q gi|254780285|r 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203 (586)
Q Consensus 124 vVE~sSpNp~KplHVGHlRsaiIGdsi~ril~~~G~~V~r~nyvgD~G~Q~~~li~~~~~~~~~~~~~~~~~~~e~~~~~ 203 (586)
T Consensus 2 ~I~~ppP~~nG~lHiGHa~~~~~~Dvl~R~~r~~G~~V~~v~g~D~~g~~i~~ka~-------~----------~----g 60 (388)
T pfam09334 2 LITTALPYVNGPPHIGHLYTTIPADVYARYLRLRGYDVLFVTGTDEHGTKIELAAE-------K----------E----G 60 (388)
T ss_pred EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHH-------H----------C----C
T ss_conf 89378988888600224188999999999999569970713864853799999999-------8----------4----9
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHCCHHHHHHHHHHHHHC
Q ss_conf 10000127888887576413430237999999978998875455588708752100015887301045799999999974
Q gi|254780285|r 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283 (586)
Q Consensus 204 ~y~~~~~~e~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~l~i~fD~~~~Es~~~~~~~~~i~~~i~~l~~~ 283 (586)
T Consensus 61 ~--------------------~----~~---e~-~~~y~~~~~~~~~~lgi~~D~~~~t~~~--~~~~~v~~~f~~L~~~ 110 (388)
T pfam09334 61 V--------------------T----PQ---EL-VDRYHEEFKELFKKFNISFDDFIRTTSE--RHKELVQEFFLKLYEK 110 (388)
T ss_pred C--------------------C----HH---HH-HHHHHHHHHHHHHHHCCCCCCCCCCCCH--HHHHHHHHHHHHHHHC
T ss_conf 9--------------------9----99---99-9999999999999839967878657984--6899999998751406
Q ss_pred CCCCCCCCCCCCCCCCCC--CC--CC------------C---CCE--EEEHHHCCCC------CCCCCCCCCCCHHHHHH
Q ss_conf 985113426755565420--00--24------------7---815--6510110222------22221024652135688
Q gi|254780285|r 284 GYVYEGILPPPKSKTTQK--CD--MD------------R---KQL--LFRSTMVGDD------VDRPLLKSDGSYTYFAA 336 (586)
Q Consensus 284 g~~~e~~~~~~~~~~~~~--~~--~~------------~---~~~--~~~~~~~g~~------~d~vl~rsDGt~~Y~t~ 336 (586)
T Consensus 111 G~iy~~~~~~~y~~~~~~~l~d~~v~g~cp~~~~~~~~~~~~e~~G~~~e~~~~~~~~~~~~~~~~~~~~~~~~f~~-l~ 189 (388)
T pfam09334 111 GDIYEGEYEGWYCVSDERFLPDRYVEGTCPYCGSEDARGDQCEVCGRPLEPTELINPRSAISGSTPELKEEEHYFFR-LS 189 (388)
T ss_pred CCEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCCCHHHHCCCCCCCCCCCCEEECCCCHHHH-HH
T ss_conf 81553241122366666666533307545755750136641002388278677417644467997544324412330-68
Q ss_pred HHH-----H----------------HHHH----------------HH--CCCCCCCCC----------------------
Q ss_conf 899-----9----------------9997----------------52--255543336----------------------
Q gi|254780285|r 337 DLA-----Y----------------FKCK----------------YE--RGFDNMIYV---------------------- 355 (586)
Q Consensus 337 DiA-----~----------------~~~k----------------~e--~~~d~~iyV---------------------- 355 (586)
T Consensus 190 ~~~~~l~~~~~~~~~~~~~~~~~~~~~wl~~~l~Dw~ISR~~~WG~~iP~~~~~~~~vW~da~~~~~~~~~~~~~~~~~~ 269 (388)
T pfam09334 190 KFQDKLLEWIKENPDEPPSNVNEVVLSWLKEGLKDLSITRDLDWGIPVPGDPGKVIYVWFDALIGYISATKYLSGNPEKW 269 (388)
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHH
T ss_conf 89999999995499889889999999998668887644124778750488898068772356555200027777781788
Q ss_pred ---------------CCCCHHHHHHHHH-HHHHHHCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf ---------------7776136899999-999972266345115311011012211000001223302456777776321
Q gi|254780285|r 356 ---------------MGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 (586)
Q Consensus 356 ---------------v~~~Q~~h~~~v~-~~~~~lg~~~~~~~~~~~~~v~l~~dg~~~kmstR~G~~v~l~dll~evg~ 419 (586)
T Consensus 270 ~~~w~~~~~~~~i~~~G~Di~~fh~~~~~a~~~~~~~~~~~-~~~~~g~v~~--~G~--KMSKSlGN~i~~~d~i~~yga 344 (388)
T pfam09334 270 KKFWADDPDTEIVHFIGKDIIRFHAIYWPAMLMAAGLPLPT-QVFAHGWLTV--EGG--KMSKSRGNVVDPDELLDRYGV 344 (388)
T ss_pred HHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCC-EEEEEEEEEE--CCE--ECCCCCCCCCCHHHHHHHCCC
T ss_conf 86443677620001067641420178999999838999886-6787579975--994--447869987888999988782
Q ss_pred HHHHHHHHHHC-CHHHHHHHHHHHHH
Q ss_conf 12345554200-01233344777653
Q gi|254780285|r 420 DSVRFMMLWRK-NSELLDFDFCKVKE 444 (586)
Q Consensus 420 ~aiky~~L~~~-~~~~~~Fd~d~~l~ 444 (586)
T Consensus 345 DalR~~L~~~~~~~~d~~Fs~~~~~~ 370 (388)
T pfam09334 345 DALRYYLAREAPEGKDGDFSWEDFVE 370 (388)
T ss_pred HHHHHHHHHCCCCCCCCCCCHHHHHH
T ss_conf 89999999539998999899999999