HHsearch results for GI: 254780285 and protein with PDBid: 1wkb_A

>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii}
Probab=99.53  E-value=4.7e-10  Score=87.98  Aligned_cols=129  Identities=15%  Similarity=0.198  Sum_probs=85.4

Q ss_pred             EEECCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf             53110110122110000012233024567777763211234555420-00123334477765320244367888888889
Q gi|254780285|r  383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKVKEQSKENPVFYVQYAYARC  461 (586)
Q Consensus       383 ~~~~~~v~l~~dg~~~kmstR~G~~v~l~dll~evg~~aiky~~L~~-~~~~~~~Fd~d~~l~~~~~nt~~YiqYa~aR~  461 (586)
                      ++..+++.  .+|+  |||+.+||+|...+++++-|.+++|+.+++. ....++.|+.+.+...  .+       ...|+
T Consensus       638 v~~~g~~~--~~G~--KMSKS~GNvidp~~ii~~yGaD~lRl~l~~~~~~~~d~~~~~~~i~~~--~~-------~l~~~  704 (810)
T 1wkb_A          638 IAVNGFGT--LEGQ--KMSKSKGNVLNFIDAIEENGADVVRLYIMSLAEHDSDFDWRRKEVGKL--RK-------QIERF  704 (810)
T ss_dssp             EEEECCEE--ETTB--CCCTTTTCCCBHHHHHHHHCHHHHHHHHHHHCCTTCCEEECHHHHHHH--HH-------HHHHH
T ss_pred             EEEEEECC--CCCE--ECCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHH--HH-------HHHHH
T ss_conf             13444305--6761--489988887997999987190999999981498668877789999999--99-------99999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHH
Q ss_conf             999875332002468322342235521149989999999984218999999985281279999999-9998899987
Q gi|254780285|r  462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASVFHGHWS  537 (586)
Q Consensus       462 ~SIlrKa~~~~~~~~~~~~~~~~~~~~~~~~~~E~~L~~~l~~f~~vi~~a~~~~~P~~l~~Yl~~-La~~Fn~fY~  537 (586)
                      .+++.+..+...            .......+.++.++..+.++-..+.++.+++..+..+..++. +...++ +|-
T Consensus       705 ~~~~~~~~~~~~------------~~~~~~~~~D~~il~~l~~~i~~v~~~~~~~~~~~a~~~~~~~~~~~~~-~y~  768 (810)
T 1wkb_A          705 YELISQFAEYEV------------KGNVELKDIDRWMLHRLNKAIKETTNALEEFRTRTAVQWAFYSIMNDLR-WYL  768 (810)
T ss_dssp             HHHHHHHHTCCC------------CSCCCCCHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTHHHHHHHH-HHH
T ss_pred             HHHHHHHHHCCC------------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-HHH
T ss_conf             999998753566------------8887878899999999999999999999875988999999999999879-999