HHsearch results for GI: 254780285 and protein with PDBid: 2v0c_A
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A*
Probab=98.59 E-value=1.3e-07 Score=70.87 Aligned_cols=126 Identities=16% Similarity=0.140 Sum_probs=82.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 0000122330245677777632112345554200-012333447776532024436788888888999987533200246
Q gi|254780285|r 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK-NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 (586)
Q Consensus 397 ~~kmstR~G~~v~l~dll~evg~~aiky~~L~~~-~~~~~~Fd~d~~l~~~~~nt~~YiqYa~aR~~SIlrKa~~~~~~~ 475 (586)
..|||+.+||++..++++++-|.+++|+++++.. +..+..|+.+.+.. ..-+++..+-.+...+....+...
T Consensus 635 g~kMSKS~gN~v~p~~~i~~yGaD~~R~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-- 707 (878)
T 2v0c_A 635 PAVMSKSKGNGVMVGPFVKEQGADIARITILFAAPPENEMVWTEEGVQG-----AWRFLNRIYRRVAEDREALLETSG-- 707 (878)
T ss_dssp EEECSGGGTCCCBHHHHHHHSCHHHHHHHHHHHSCTTSCEEECHHHHHH-----HHHHHHHHHHHHHHHHHHHHTCCC--
T ss_pred HHHCCEECCCCCCCCEEHHHCCHHHHHHHHHCCCCCHHCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHCCCCC--
T ss_conf 3104240257888400022013157776543158840000015888999-----999999999999998763204556--
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 832234223552114998999999998421899999998528127999999999988999870
Q gi|254780285|r 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 (586)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~E~~L~~~l~~f~~vi~~a~~~~~P~~l~~Yl~~La~~Fn~fY~~ 538 (586)
.......+..++.++..|..+-.-+.++.+++.-+..+.-++++...+..++..
T Consensus 708 ---------~~~~~~~~~~D~wils~l~~~i~~v~~~~~~~~f~~a~~~l~~f~n~~~~~~k~ 761 (878)
T 2v0c_A 708 ---------VFQAEALEGKDRELYGKLHETLKKVTEDLEALRFNTAIAALMEFLNALYEYRKD 761 (878)
T ss_dssp ---------CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf ---------788001898899999999999999999998789889999999999999998755