HHsearch results for GI: 254780285 and protein with PDBid: 2zue_A
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A
Probab=100.00 E-value=0 Score=986.23 Aligned_cols=550 Identities=26% Similarity=0.407 Sum_probs=437.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCC--CCE
Q ss_conf 986899999999999999860488821224527741788012741104899988882899799999999834578--973
Q gi|254780285|r 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID--PDV 78 (586)
Q Consensus 1 M~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~i~ve~p~~~~~GD~~~n~a~~lAK~~kk~P~~iA~~i~~~l~~~--~~i 78 (586)
|++...+++.|.++++++..+. ...+.|++||+++|||||||+||.+||.+|++|++||++|++.|+.+ +.+
T Consensus 3 ~~~~~~i~~~i~~~~~~~~~~~------~~~i~~~~~~~~~~GD~s~nva~~laK~~~~~P~~iA~~i~~~l~~~~~~~i 76 (629)
T 2zue_A 3 MEIRESVKERIEEIIKEIAPQW------EGEIELKETPDPKLGDFGTPIAFKLAKLLKRPPIEIAEKIVEKLKLNLPEGI 76 (629)
T ss_dssp CTTHHHHHHHHHHHHHHHCTTC------CCCCCCEECSSGGGCSEEECHHHHHHHHHTSCHHHHHHHHHHHHTTSCCTTE
T ss_pred HHHHHHHHHHHHHHHHHHCCCC------CCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCE
T ss_conf 7899999999999999736665------6865775499697746558999999998598999999999996311684405
Q ss_pred EEEEEECCCEEEEEECHHHHHHH-HHHHHHCCHHCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 14885479768788888899999-99998562213887656554100022344322441177777856899999999850
Q gi|254780285|r 79 DSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 (586)
Q Consensus 79 ~~vevagpGfIN~~l~~~~~~~~-l~~i~~~~~~yG~~~~~~~~kVvVE~sSpNp~KplHVGHlRsaiIGdsi~ril~~~ 157 (586)
++++ ++||||||+|+++++.+. +.+++..+.+||+++.++++||+||||||||||||||||+|||+|||+|||||+|+
T Consensus 77 ~~~~-a~~GFINf~l~~~~~~~~l~~~il~~~~~~G~~~~~~~kkV~VEf~SpNptkplHVGHlRsaiiGd~larlle~~ 155 (629)
T 2zue_A 77 KDVK-AVNGYINVFIDYPHFARILINDILAKGDRFGSSEIGKGKKVIVEHTSVNPTKPLHMGHARNAILGDVMARILRFL 155 (629)
T ss_dssp EEEE-EETTEEEEEECHHHHHHHHHHHHHHHGGGTTCCCTTTTCEEEEECCCCCTTSCCBHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEE-ECCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 8999-659779999999999999999999626642977467997799985289899986500047478889999999976
Q ss_pred CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCC--HHHHHHHH-
Q ss_conf 666410201477531455567898753222102450006601102410000127888887576413430--23799999-
Q gi|254780285|r 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVK- 234 (586)
Q Consensus 158 G~~V~r~nyvgD~G~Q~~~li~~~~~~~~~~~~~~~~~~~e~~~~~~y~~~~~~e~~~~~~~~~~~~~e--~~~~~~~~- 234 (586)
||+|+|+|||||||+|||++++++.....+.. ....+.+..++.+.+......+.+.+..+.....++ +...+..+
T Consensus 156 G~~V~r~~yvnD~G~Qi~~l~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~~ 234 (629)
T 2zue_A 156 GYEVEVQNYIDDLGIQFAQVYWGYLRLKEEFE-RIMNELRERGLKDNPIDHALGLLYVEVNRRLEDNPELENEIRDIMKK 234 (629)
T ss_dssp TCEEEEEEEECTTSHHHHHHHHHHHHCHHHHH-HHHHHHHHHTSCSCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH-HCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99687988558875567898998998777764-10101012210232046776667777899864016589999999998
Q ss_pred --------HHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf --------997899887545558870875210001588730104579999999997498511342675556542000247
Q gi|254780285|r 235 --------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 (586)
Q Consensus 235 --------~~~~~~~~~~~~~~l~~l~i~fD~~~~Es~~~~~~~~~i~~~i~~l~~~g~~~e~~~~~~~~~~~~~~~~~~ 306 (586)
....+.+++.+.+++.++||+||.|.+||+++. .+.++.+++.|.+.+.+|.... ....
T Consensus 235 le~~~~~~~~~~~~~~~~~~~~~~~l~i~fd~~~~Es~~~~--~~~~e~~~~~L~~~~~~~~~~~-----------~~~~ 301 (629)
T 2zue_A 235 LESGELYGRKLAEEVVRAQMVTTYKLGVKYDLLVWESDIVR--RKLFEIALELLSKNENFYIPSD-----------GKYR 301 (629)
T ss_dssp HHHSSSCCHHHHHHHHHHHHHHHHHHTCCCSEEEEHHHHHH--TTHHHHHHHHHHTSTTEECCSS-----------STTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHCC--CCCHHHHHHHHHHCCCCCCCCC-----------CCCC
T ss_conf 65100788888999999999865440440455312655302--5615788999986045114533-----------4643
Q ss_pred CCEEEEHHHC-CCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHC-----------------------------CCCCCCC
Q ss_conf 8156510110-22222--22102465213568889999997522-----------------------------5554333
Q gi|254780285|r 307 KQLLFRSTMV-GDDVD--RPLLKSDGSYTYFAADLAYFKCKYER-----------------------------GFDNMIY 354 (586)
Q Consensus 307 ~~~~~~~~~~-g~~~d--~vl~rsDGt~~Y~t~DiA~~~~k~e~-----------------------------~~d~~iy 354 (586)
++++++.+.. +++++ +||+|||||+||+|+|||||++|+++ ++|++||
T Consensus 302 ga~~~~~~~~~~d~~~~~~vl~ksDGt~tY~t~DIA~~~~K~~r~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~d~iI~ 381 (629)
T 2zue_A 302 GAFVMDLRKLFPDMKNPILVLRRSDGTATYTGKDIAYHLWKFGKIDVDLLYKEWDSTTWTTAPDGKSMPNKFGNANIVIN 381 (629)
T ss_dssp TCEEEECTTTCSSSSCCEEEEECTTSCBCHHHHHHHHHHHHTTCSCCCCEEEECSSSCEEEEEEEEECTTSSCCCSEEEE
T ss_pred CCHHHHHHHHCCCCCCCCEEEECCCCCEEEEHHHHHHHHHHHHCCCCCHHHCCCCCCCEEECCCHHHHHHHHCCCCEEEE
T ss_conf 32012211105655654003781499545631678877766501342012002455430453530455543046357988
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCC--CCCEEEECCHHHCCCCCCCCCCCCCCCCHH--HHHHHHH---------------
Q ss_conf 677761368999999999722663--451153110110122110000012233024--5677777---------------
Q gi|254780285|r 355 VMGSDHSGYVKRLEAVAAAVSEKK--AQINVLLCELVRLYRDGMPIKMSKRAGDFI--TLRHVVD--------------- 415 (586)
Q Consensus 355 Vv~~~Q~~h~~~v~~~~~~lg~~~--~~~~~~~~~~v~l~~dg~~~kmstR~G~~v--~l~dll~--------------- 415 (586)
|||++|+.||+|++.+++.||+.. .++.|+.|++|.+. +| |||||+|+++ +++|+++
T Consensus 382 V~g~~q~~~~~~l~~~l~~lg~~~~~~~l~h~~~g~v~~~-~~---kms~r~g~~v~~~l~dll~e~~~r~~~~i~~~~~ 457 (629)
T 2zue_A 382 VIGAEQKHPQLAIKYALQLLGFEDAAANLYHLAYEHVERP-EG---KFSGRKGTWVGFTVDEVIQEAVKRARELIEEKNP 457 (629)
T ss_dssp EEEGGGHHHHHHHHHHHHHTTCHHHHHTEEEEEECCEEBT-TB---CCCTTTTTTTTCBHHHHHHHHHHHHHHHHHHHCT
T ss_pred ECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECC-CC---CCCEEECCEEHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 5476303379999999998279960035378887678627-77---6200011200113777999999999999985065
Q ss_pred ------------HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf ------------63211234555420001233344777653202443678888888899998753320024683223422
Q gi|254780285|r 416 ------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 (586)
Q Consensus 416 ------------evg~~aiky~~L~~~~~~~~~Fd~d~~l~~~~~nt~~YiqYa~aR~~SIlrKa~~~~~~~~~~~~~~~ 483 (586)
+||+||+||+||++++.++|+|||++++++ +|||+|||||||||||||||||++.+..++.+.+...
T Consensus 458 ~~~~~~~~~~a~~vg~~Airy~~L~~~~~~~~~FD~d~~l~~-~gnt~~YiQYa~AR~~SIlrKa~~~~~~~~~~~~~~~ 536 (629)
T 2zue_A 458 ALSDEEKAEVAEKVGIGAIRYNLIKYSPDKKIIFRWEDVLNF-EGESAPYIQYAHARCSSILRKAEEEGIKVDPETLFKN 536 (629)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHSSCTTSCEECCHHHHSCC-SSSSHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCHHEEEEEHCCCCCCCCCCCHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC
T ss_conf 322889999998735002351100026553435579999631-3898310668999999999975640678885564224
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 35521149989999999984218999999985281279999999999889998706866666543578789999999999
Q gi|254780285|r 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 (586)
Q Consensus 484 ~~~~~~~~~~~E~~L~~~l~~f~~vi~~a~~~~~P~~l~~Yl~~La~~Fn~fY~~~~~~~~~~v~~~~~~~~~~~RL~L~ 563 (586)
. ....+++.|++|+++|++||++|.+|+++++||+||.|||+||+.||+||++| +|+.++ ++++.+||+||
T Consensus 537 ~--~~~~l~~~E~~L~~~l~~f~~vv~~a~~~~~Ph~l~~Yl~~La~~f~~fY~~~------~Vl~~~-~~~~~~RL~L~ 607 (629)
T 2zue_A 537 A--DFTKLSERERELVIMLSKFPRIVEQAGKDVKPHLIAWFANELASLFNKFYMDH------PVLKAE-EGVREARLLLV 607 (629)
T ss_dssp C--CCSSCCHHHHHHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHHHHC------CSTTSC-TTHHHHHHHHH
T ss_pred C--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCC-HHHHHHHHHHH
T ss_conf 3--23349989999999998689999999996981899999999999999999629------867899-89999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 9999999998731587985445
Q gi|254780285|r 564 HAVASIINSGLNIIGVESPNEM 585 (586)
Q Consensus 564 ~a~~~vL~~~L~LLGI~~perM 585 (586)
.|+++||++||.||||+|||||
T Consensus 608 ~a~~~vL~~gL~lLGI~~~e~M 629 (629)
T 2zue_A 608 MAVEQVLKNALYLMGIEAPERM 629 (629)
T ss_dssp HHHHHHHHHHHHHTTCCCCSCC
T ss_pred HHHHHHHHHHHHCCCCCCCCCC
T ss_conf 9999999998660398855779