HHsearch results for GI: 254780285 and protein with PDBid: 3c8z_A
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis}
Probab=99.80 E-value=1.6e-16 Score=133.27 Aligned_cols=316 Identities=17% Similarity=0.138 Sum_probs=187.0
Q ss_pred CCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH
Q ss_conf 54100022344322441177777856899999999850666410201477531455567898753222102450006601
Q gi|254780285|r 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199 (586)
Q Consensus 120 ~~kVvVE~sSpNp~KplHVGHlRsaiIGdsi~ril~~~G~~V~r~nyvgD~G~Q~~~li~~~~~~~~~~~~~~~~~~~e~ 199 (586)
+++|-+=-+.|-|..++||||+|++|++|+|+|+|++.||+|.....+.|.|.++-..+.. +.
T Consensus 37 ~~~v~~Y~CGpTvy~~~HIGhaRt~v~~D~l~R~L~~~G~~V~~v~nitDiddKIi~~A~~------~g----------- 99 (414)
T 3c8z_A 37 GPTATMYVCGITPYDATHLGHAATYLTFDLVHRLWLDAGHTVQYVQNVTDVDDPLFERAER------DG----------- 99 (414)
T ss_dssp CSEEEEEECCCCTTSCCBHHHHHHHHHHHHHHHHHHHTTCEEEEEEEECCSCHHHHHHHHH------HT-----------
T ss_pred CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH------CC-----------
T ss_conf 8951598589977888640003269999999999998599669986568533899999875------49-----------
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE-CHHHHHHCCHHHHHHHHH
Q ss_conf 1024100001278888875764134302379999999789988754555887087521000-158873010457999999
Q gi|254780285|r 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI-SEDDFHRGDPSPIRDIID 278 (586)
Q Consensus 200 ~~~~~y~~~~~~e~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~l~i~fD~~~-~Es~~~~~~~~~i~~~i~ 278 (586)
.. .+++. +...+.+.+.++.|||..+... .-+++ ...+...++
T Consensus 100 ----~~----~~e~a------------------------~~~~~~f~~~~~~L~i~~~~~~~rate~----i~~ii~~i~ 143 (414)
T 3c8z_A 100 ----ID----WRTLG------------------------DRETQLFREDMAALRVLPPHDYVAATDA----IAEVVEMVE 143 (414)
T ss_dssp ----CC----HHHHH------------------------HHHHHHHHHHHHHTTCCCCSEEEEGGGC----HHHHHHHHH
T ss_pred ----CC----HHHHH------------------------HHHHHHHHHHHHHHCCCCCCEEECCCCC----HHHHHHHHH
T ss_conf ----99----99999------------------------9999999999987468999566314002----999999999
Q ss_pred HHHHCCCCCCCCCCCCCC----------CCC-----------------------CCCCCCCCCEEEEHHHCCCCCCCCCC
Q ss_conf 999749851134267555----------654-----------------------20002478156510110222222210
Q gi|254780285|r 279 NLARQGYVYEGILPPPKS----------KTT-----------------------QKCDMDRKQLLFRSTMVGDDVDRPLL 325 (586)
Q Consensus 279 ~l~~~g~~~e~~~~~~~~----------~~~-----------------------~~~~~~~~~~~~~~~~~g~~~d~vl~ 325 (586)
+|.++|++|+.......+ .+. ..-+..+-.+| +.+..|+..- .--
T Consensus 144 ~l~~kg~aY~~~~~~~~~vyf~~~~~~~yg~l~~~~~~~~~~~~~~~~~~~~~~~K~~~~DF~Lw-k~~~~~~~~w-~Sp 221 (414)
T 3c8z_A 144 KLLASGAAYIVEDAEYPDVYFRADATAQFGYESGYDRDTMLTLFAERGGDPDRPGKSDQLDALLW-RAERPGEPSW-PSP 221 (414)
T ss_dssp HHHHHTSEEECSCSSCCCEEECTTSSTTTTTTTCCCHHHHHHHHHHTTCCTTCTTCSSTTCEEEE-EECCTTSCCB-CCT
T ss_pred HHHHHHHCCCCCCCCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHCCCCCHHCCCCHHHHHHH-CCCCCCCCCC-CCC
T ss_conf 98642320012687554279983033314742111156665554320243200002587776411-0266578763-488
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH--HHHHHHHHHHHHCC-CCCCCEEEECCHHHCCCCCCCCCCCC
Q ss_conf 2465213568889999997522555433367776136--89999999997226-63451153110110122110000012
Q gi|254780285|r 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG--YVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSK 402 (586)
Q Consensus 326 rsDGt~~Y~t~DiA~~~~k~e~~~d~~iyVv~~~Q~~--h~~~v~~~~~~lg~-~~~~~~~~~~~~v~l~~dg~~~kmst 402 (586)
.++|-+.+..-+-|.+...+...+| |..-|.|+.. |-..........|. +.++ .-++.+++.. +|+ |||+
T Consensus 222 wG~GrPgWHiECsam~~~~lg~~~D--IH~GG~Dl~fPHHeneiAq~~a~~g~~~~~~-~w~h~g~l~~--~g~--KMSK 294 (414)
T 3c8z_A 222 FGRGRPGWHVECSAIALTRIGTGLD--IQGGGSDLIFPHHEYSAAHAESVTGERRFAR-HYVHTGMIGW--DGH--KMSK 294 (414)
T ss_dssp TCSEEECHHHHHHHHHHHHTCSCEE--EEEEEGGGTTTHHHHHHHHHHHHHCCSCSEE-EEEEECCBC------------
T ss_pred CCCCCCCCCCCCCHHHHHCCCCCEE--EECCCCCCCCCCHHHHHHHHHHHHCCCCCCH-HHEECCEEEE--CCC--CCCC
T ss_conf 7762884674424888740698335--7405565566316769999999749974012-1223337985--064--6777
Q ss_pred CCCCHHHHHHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 23302456777776-32112345554200012333447776532024436788888888999987533200246832234
Q gi|254780285|r 403 RAGDFITLRHVVDE-VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 (586)
Q Consensus 403 R~G~~v~l~dll~e-vg~~aiky~~L~~~~~~~~~Fd~d~~l~~~~~nt~~YiqYa~aR~~SIlrKa~~~~~~~~~~~~~ 481 (586)
+.||+++++|++++ ++..++||++|+..-.+++.|+++.+.. .+ + +..|+.+.++.....
T Consensus 295 SlGN~~~~~d~l~~~~~~~~~R~~ll~~hYr~~l~fs~e~l~~-a~-~-------~l~rl~~~~~~~~~~---------- 355 (414)
T 3c8z_A 295 SRGNLVLVSQLRAQGVDPSAIRLGLFSGHYREDRFWSNEVLDE-AN-A-------RLARWRSATALPEAP---------- 355 (414)
T ss_dssp -----CBHHHHHHTTCCHHHHHHHHHTSCTTSCBCCCHHHHHH-HH-H-------HHHHHHHHHTSSCBS----------
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHH-HH-H-------HHHHHHHHHHCCCCC----------
T ss_conf 6887031999986279889989999861157511389999999-99-9-------999999986154567----------
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 2235521149989999999984218999999-98528127999999999988999
Q gi|254780285|r 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENA-TIAQEPYKLAFYLYDLASVFHGH 535 (586)
Q Consensus 482 ~~~~~~~~~~~~~E~~L~~~l~~f~~vi~~a-~~~~~P~~l~~Yl~~La~~Fn~f 535 (586)
...+ +.+-+.+| ..++.-......++++++..|+.
T Consensus 356 ----------~~~~---------~~~~f~~al~DDlntp~Al~~l~~li~~~n~~ 391 (414)
T 3c8z_A 356 ----------DATD---------VIARVRQYLADDLDTPKALAALDGWCTDALSY 391 (414)
T ss_dssp ----------CCHH---------HHHHHHHHHHBTCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------CHHH---------HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf ----------5368---------99999999876788589999999999999864