PSIBLAST alignment of GI: 254780285 and protein with PDB id: 1iq0

gi|17942832|pdb|1IQ0|A Chain A, Thermus Thermophilus Arginyl-Trna Synthetase Length = 592
 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 110/623 (17%), Positives = 206/623 (33%), Gaps = 76/623 (12%)

Query: 7   FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66
               L+  + +   ++ V      R+ + R      G         L++ L   P  IA+
Sbjct: 2   LRRALEEAIAQALKEMGVPV----RLKVARAPKDKPGDYGVPL-FALAKELRKPPQAIAQ 56

Query: 67  LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126
            +  R+ +   V+     G G++N  L    L   L   +     + R    +   V +E
Sbjct: 57  ELKDRLPLPEFVEEAVPVG-GYLNFRLRTEAL---LREALRPKAPFPR----RPGVVLVE 108

Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186
             S NP   +HVGH R   +GD +A ++A++G EV    YI+D G Q      ++     
Sbjct: 109 HTSVNPNKELHVGHLRNIALGDAIARILAYAGREVLVLNYIDDTGRQAAETLFALRHYGL 168

Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246
                   D   G       +    E       E+L+  E   L       V  ++    
Sbjct: 169 TWDGKEKYDHFAGRAYVRLHQDPEYERLQPAIEEVLHALERGEL----REEVNRILLAQM 224

Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY---VYEGILPPPKSKTTQKCD 303
             + ALN ++D+ + E D  R     ++  +  L +  +     EG              
Sbjct: 225 ATMHALNARYDLLVWESDIVRA--GLLQKALALLEQSPHVFRPREGKYAGALVMDASPVI 282

Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363
              +   F                   +             YE  +   +     +   Y
Sbjct: 283 PGLEDPFFVLLRSNGTATYYAKDIAFQFWKMGILEGLRFRPYENPYYPGLRTSAPEGEAY 342

Query: 364 VKRLEAVAAAVSEKKAQIN----------------------------------------- 382
             + E     V  +++                                            
Sbjct: 343 TPKAEETINVVDVRQSHPQALVRAALALAGYPALAEKAHHLAYETVLLEGRQMSGRKGLA 402

Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442
           V + E++          + ++  D          V   ++RF M+  +  + +DF + + 
Sbjct: 403 VSVDEVLEEATRRARAIVEEKNPDHPDKEEAARMVALGAIRFSMVKTEPKKQIDFRYQEA 462

Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502
               + +   YVQYA+AR  SI R+A +               P  S+    E  L + L
Sbjct: 463 LSF-EGDTGPYVQYAHARAHSILRKAGEWG------------APDLSQATPYERALALDL 509

Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562
            ++   +  A   + P+ LA YL DLA+ ++ +++          V      L  +RL L
Sbjct: 510 LDFEEAVLEAAEERTPHVLAQYLLDLAASWNAYYNARENGQPATPVLTAPEGLRELRLSL 569

Query: 563 VHAVASIINSGLNIIGVESPNEM 585
           V ++   + +GL+++G+ +P  M
Sbjct: 570 VQSLQRTLATGLDLLGIPAPEVM 592