HHsearch alignment for GI: 254780286 and conserved domain: pfam07514

>pfam07514 TraI_2 Putative helicase. Some members of this family have been annotated as helicases.

Probab=95.61  E-value=0.012  Score=39.37  Aligned_cols=73  Identities=27%  Similarity=0.377  Sum_probs=55.9

Q ss_pred             CCCCCHHHCCCCEEECCHHHHHHCCCCEEEECCCCCCCCCC---HHHHHHHHHHHHHHHHHCCCCH-----H--------
Q ss_conf             99998434000011027346232757478716999870662---0888999999999998839998-----8--------
Q gi|254780286|r   34 SLTRSEFQRDRDRMIHTTAFRRLKDKTQVFFHRQRDHYRTR---LMHTIEVSQIARSLARALRIDE-----D--------   97 (410)
Q Consensus        34 ~~~R~~f~rD~dRIi~S~afRRL~~KTQVf~~~~~d~~rtR---LtHslEVa~i~rsi~~~l~~~~-----d--------   97 (410)
T Consensus        29 ~l~~~~f~~~~-----l~pl~~~A~~VqllPASe~hhha~~GGlldh~Lev~~~Alrl~~~~~lp~ga~pEeq~~q~~~W  103 (326)
T pfam07514        29 GLSREDFERLY-----LPPIRRYAELVQLLPASENHHHSGPGGLLDHGLEVAFYALKLRQGYILPPNATPEEQAAQEDAW  103 (326)
T ss_pred             CCCHHHHHHHH-----HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHH
T ss_conf             99989999999-----9999999999961888877887788708998999999999985262279998889999886165


Q ss_pred             --HHHHHHHHHHCCCC
Q ss_conf             --99999988862899
Q gi|254780286|r   98 --LVEAIALAHDFGHP  111 (410)
Q Consensus        98 --lvea~~L~HDiGhp  111 (410)
T Consensus       104 ~~av~~aaL~HDiGK~  119 (326)
T pfam07514       104 RAAAFYAALLHDLGKP  119 (326)
T ss_pred             HHHHHHHHHHHHCCCC
T ss_conf             9999999997241674