HHsearch alignment of GI: 254780286 and MMDB domain: 1vqr_A_

>1vqr_A (A:) Hypothetical protein CJ0248; 6967725, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.25A {Campylobacter jejuni subsp}

Probab=95.41  E-value=0.0074  Score=40.33  Aligned_cols=38  Identities=13%  Similarity=-0.033  Sum_probs=33.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHCCCCC
Q ss_conf             08889999999999988399-988999999888628998
Q gi|254780286|r   75 LMHTIEVSQIARSLARALRI-DEDLVEAIALAHDFGHPP  112 (410)
Q Consensus        75 LtHslEVa~i~rsi~~~l~~-~~dlvea~~L~HDiGhpP  112 (410)
                      ..||+.||.+++.+|+.++. +++++..+||.||||=..
T Consensus       126 ~~hs~~~A~la~~la~~l~~~~~~~~~~agllhdiGkl~  164 (297)
T 1vqr_A          126 LKTCNEEATFIANWLNDEDKKLSHLLVPCAXLLRLGIVI  164 (297)
T ss_dssp             HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHH
T ss_conf             999789999999998762542689999867775302999