HHsearch alignment of GI: 254780286 and MMDB domain: 3hc1_A_1-25_111-305

>3hc1_A (A:1-25,A:111-305) Uncharacterized HDOD domain protein; HDOD domain protein with unknown function, structural genomics; 1.90A {Geobacter sulfurreducens}
Probab=97.35  E-value=0.00012  Score=53.67  Aligned_cols=121  Identities=17%  Similarity=0.074  Sum_probs=69.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHCCCC----CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             66208889999999999988399-98899999988862899----88654789999997312554577657788754321
Q gi|254780286|r   72 RTRLMHTIEVSQIARSLARALRI-DEDLVEAIALAHDFGHP----PFGHVGEDVLQELLSSYGGFDHNIQSFRIVTELEC  146 (410)
Q Consensus        72 rtRLtHslEVa~i~rsi~~~l~~-~~dlvea~~L~HDiGhp----PFGH~GE~al~~~~~~~~gFegNaQ~~Rilt~LE~  146 (410)
                      -++.-||+.||.+++.||+.+++ +++++..++|.||||-.    .|++..+..........+.+          +..|.
T Consensus        32 ~~~~~HS~~vA~~A~~iA~~l~~~d~e~a~~agLLHDIGk~~l~~~~~~~~~~~~~~~~~~~~~l----------~~~E~  101 (220)
T 3hc1_A           32 STLWAHSLGVARIAKLIAERTGFLNPVNVYVAGLLHDVGEVFINFFRGKEFSQVVTLVDEEKITF----------GQAEE  101 (220)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHTTTHHHHHHHHHSHHHHHHHHHHHHHHCCCH----------HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH----------HHHHH
T ss_conf             88899999999999999998036899999999999846999997766698999999986579998----------99999


Q ss_pred             CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH--HHHHCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             1467010002478887763475778864445521001457766--76402231336673217986565544321
Q gi|254780286|r  147 SYADFDGINLTWETLEGLIGHNGPILPQDLDKPRIIPRIFSDY--YHIHGLSLANFASLEGQVAAIADDIAYDA  218 (410)
Q Consensus       147 ~~~~~~GLNLT~atL~~iiKyp~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~slEa~iveaADDIAY~~  218 (410)
                           .=+..+.+.+++.+.-.|...+.           ....  ..-..+.....++..+.++-+||.++=..
T Consensus       102 -----~~~~~~h~~~g~~l~~~~~~p~~-----------i~~~I~~Hhe~~~~~~~~~~la~~v~iAd~~~~~~  159 (220)
T 3hc1_A          102 -----RLFGTSHCEVGFALAKRWSLNEF-----------ICDTILYHHDIEAVPYKQAAIVAXVAFADEYCTLR  159 (220)
T ss_dssp             -----HHHSSCHHHHHHHHHHHTTCCHH-----------HHHHHHHTTCGGGCSSSCCHHHHHHHHHHHHHHHT
T ss_pred             -----HHHCCCHHHHHHHHHHHCCCCHH-----------HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf             -----99688999999999998699999-----------99999986592427755035979999999999970