Query gi|254780286|ref|YP_003064699.1| deoxyguanosinetriphosphate triphosphohydrolase-like protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 410
No_of_seqs 191 out of 1457
Neff 8.0
Searched_HMMs 23785
Date Tue May 24 15:14:40 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780286.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dqb_A Deoxyguanosinetriphosph 100.0 0 0 909.5 25.9 366 8-396 10-375 (376)
2 3bg2_A DGTP triphosphohydrolas 100.0 0 0 836.2 22.7 370 20-399 12-442 (444)
3 2pgs_A Putative deoxyguanosine 100.0 0 0 831.5 17.3 378 12-401 4-444 (451)
4 2hek_A Hypothetical protein; p 100.0 3.1E-35 1.3E-39 278.6 1.7 108 39-146 14-124 (371)
5 3irh_A HD domain protein; phos 99.8 8.8E-19 3.7E-23 156.9 13.4 101 34-146 42-166 (480)
6 2q14_A Phosphohydrolase; BT420 99.7 2.4E-16 1E-20 139.0 11.7 93 45-147 25-131 (410)
7 2o08_A BH1327 protein; putativ 98.9 2.9E-09 1.2E-13 86.6 6.1 122 59-215 4-131 (188)
8 2ogi_A Hypothetical protein SA 98.3 5.5E-05 2.3E-09 54.9 15.1 105 72-215 25-139 (196)
9 3ccg_A HD superfamily hydrolas 98.2 2.5E-05 1E-09 57.5 11.5 106 73-216 19-134 (190)
10 2pq7_A Predicted HD superfamil 97.7 9.5E-05 4E-09 53.2 6.8 99 74-214 34-134 (220)
11 3djb_A Hydrolase, HD family; a 97.6 6.6E-05 2.8E-09 54.4 5.5 51 68-118 20-70 (223)
12 3dto_A BH2835 protein; all alp 97.6 0.00014 5.8E-09 52.0 7.2 46 73-118 25-70 (223)
13 3gw7_A Uncharacterized protein 97.6 7.6E-05 3.2E-09 53.9 4.9 45 73-117 25-69 (239)
14 3b57_A LIN1889 protein; Q92AN1 97.3 0.00047 2E-08 48.1 6.4 46 73-118 25-70 (209)
15 2qgs_A Protein Se1688; alpha-h 97.3 0.00067 2.8E-08 46.9 6.7 50 69-118 21-71 (225)
16 2pjq_A Uncharacterized protein 97.0 0.0014 5.9E-08 44.6 6.5 46 68-113 25-70 (231)
17 3m1t_A Putative phosphohydrola 96.7 0.00079 3.3E-08 46.4 2.8 131 68-221 100-231 (275)
18 3hc1_A Uncharacterized HDOD do 96.4 0.0015 6.1E-08 44.4 2.9 135 63-217 107-243 (305)
19 3mem_A Putative signal transdu 94.6 0.061 2.6E-06 32.5 5.7 68 40-116 25-94 (457)
20 3dyn_A High affinity CGMP-spec 94.2 0.028 1.2E-06 34.9 3.2 73 70-143 73-158 (329)
21 3ljx_A MMOQ response regulator 94.0 0.036 1.5E-06 34.2 3.3 84 75-171 110-194 (288)
22 3kq5_A Hypothetical cytosolic 93.7 0.0048 2E-07 40.6 -1.5 71 36-111 43-118 (393)
23 1tbf_A CGMP-specific 3',5'-cyc 92.8 0.087 3.6E-06 31.3 3.7 73 70-143 99-184 (347)
24 1f0j_A PDE4B, phosphodiesteras 92.0 0.07 2.9E-06 32.0 2.5 44 70-114 81-131 (377)
25 3bjc_A CGMP-specific 3',5'-cyc 91.8 0.15 6.2E-06 29.6 3.9 20 384-403 824-843 (878)
26 3itu_A CGMP-dependent 3',5'-cy 91.8 0.1 4.2E-06 30.9 3.0 44 70-114 80-130 (345)
27 3ibj_A CGMP-dependent 3',5'-cy 91.6 0.13 5.5E-06 30.0 3.5 24 382-405 648-671 (691)
28 3hr1_A CAMP and CAMP-inhibited 91.5 0.17 7.2E-06 29.1 4.0 47 69-118 108-159 (380)
29 2r8q_A Class I phosphodiestera 91.3 0.13 5.3E-06 30.1 3.1 72 69-143 97-186 (359)
30 3ecm_A High affinity CAMP-spec 91.2 0.047 2E-06 33.3 0.8 71 70-143 73-158 (338)
31 1y2k_A DPDE3, PDE43, CAMP-spec 91.1 0.1 4.4E-06 30.7 2.5 45 70-115 94-145 (349)
32 1zkl_A HCP1, TM22, high-affini 90.8 0.051 2.2E-06 33.0 0.8 70 70-142 81-165 (353)
33 1taz_A Calcium/calmodulin-depe 90.4 0.19 8.2E-06 28.7 3.4 151 70-229 80-245 (365)
34 3g4g_A DPDE3, PDE43, CAMP-spec 90.2 0.15 6.5E-06 29.5 2.8 42 71-113 161-209 (421)
35 2cqz_A 177AA long hypothetical 90.1 0.36 1.5E-05 26.7 4.6 37 73-109 32-73 (177)
36 1xx7_A Oxetanocin-like protein 89.7 0.4 1.7E-05 26.4 4.6 37 73-109 37-78 (184)
37 2our_A CAMP and CAMP-inhibited 89.4 0.19 8.2E-06 28.7 2.8 51 68-119 76-131 (331)
38 3mzo_A LIN2634 protein; HD-dom 89.2 0.53 2.2E-05 25.5 4.9 42 68-109 25-71 (216)
39 3i7a_A Putative metal-dependen 88.2 1.3 5.4E-05 22.7 12.3 114 74-218 118-239 (281)
40 2paq_A 5'-deoxynucleotidase YF 88.0 0.51 2.2E-05 25.6 4.1 38 72-109 30-73 (201)
41 3kh1_A Predicted metal-depende 86.7 0.53 2.2E-05 25.5 3.6 37 73-109 40-78 (200)
42 3hi0_A Putative exopolyphospha 84.9 0.6 2.5E-05 25.1 3.2 22 211-232 289-310 (508)
43 1u6z_A Exopolyphosphatase; alp 82.6 1.4 5.9E-05 22.4 4.3 20 211-230 287-306 (513)
44 1ynb_A Hypothetical protein AF 81.3 2.1 8.8E-05 21.1 4.8 38 72-109 37-77 (173)
45 1so2_A CGMP-inhibited 3',5'-cy 80.8 0.39 1.7E-05 26.5 0.9 21 69-90 81-101 (420)
46 1vj7_A Bifunctional RELA/SPOT; 79.7 1.6 6.6E-05 22.0 3.7 57 43-109 24-80 (393)
47 3m5f_A Metal dependent phospho 77.1 3 0.00013 19.9 4.5 90 73-171 16-127 (244)
48 1vqr_A Hypothetical protein CJ 70.8 1.9 8.1E-05 21.4 2.3 42 71-112 122-164 (297)
49 3nr1_A HD domain-containing pr 68.3 3.6 0.00015 19.4 3.2 56 45-108 5-62 (178)
50 3nqw_A CG11900; stringent resp 67.0 2.9 0.00012 20.0 2.5 56 46-108 8-64 (179)
51 2ar0_A M.ecoki, type I restric 47.6 3.8 0.00016 19.2 0.4 13 128-140 214-226 (541)
52 2zxq_A Endo-alpha-N-acetylgala 44.0 3.4 0.00014 19.5 -0.3 22 105-126 362-388 (1376)
53 2gz4_A Hypothetical protein AT 43.9 13 0.00054 15.3 3.1 76 39-131 26-102 (207)
54 2rhk_A NS1, NS1A, non-structur 42.6 3.1 0.00013 19.8 -0.7 33 114-146 85-117 (140)
55 3l4q_A NS1, NS1A, non-structur 40.7 4.2 0.00018 18.8 -0.2 32 114-145 102-133 (164)
56 3lkd_A Type I restriction-modi 40.2 5.7 0.00024 17.9 0.4 13 129-141 252-264 (542)
57 3d6r_B NS1, NS1A, non-structur 38.7 4.7 0.0002 18.5 -0.2 32 114-145 96-127 (158)
58 1ufb_A TT1696 protein; structu 37.0 12 0.00049 15.6 1.5 24 99-124 42-65 (127)
59 3ecq_A Protein SPR0328, endo-a 36.8 5.2 0.00022 18.2 -0.3 16 105-120 620-635 (1531)
60 2ih2_A Modification methylase 34.4 8.1 0.00034 16.8 0.4 21 50-70 55-75 (421)
61 2kvi_A Nuclear polyadenylated 31.0 17 0.00071 14.4 1.6 23 108-130 15-37 (96)
62 1lgh_B LH II, B800/850, light 27.7 23 0.00095 13.5 1.9 16 380-395 5-20 (45)
63 2huo_A Inositol oxygenase; pro 24.9 25 0.001 13.2 1.5 21 93-113 114-134 (289)
64 3eu6_A NS1, nonstructural prot 24.2 9.6 0.0004 16.2 -0.7 11 153-163 51-61 (215)
65 3a62_A Ribosomal protein S6 ki 22.3 28 0.0012 12.8 3.9 11 223-233 203-213 (327)
66 1o3u_A Conserved hypothetical 21.7 29 0.0012 12.7 2.9 21 103-124 50-70 (135)
67 1wf1_A RNA-binding protein RAL 21.1 29 0.0012 12.6 2.6 23 108-130 32-54 (110)
68 1dw9_A Cyanate lyase; cyanate 21.1 23 0.00095 13.5 0.7 35 72-106 11-50 (156)
No 1
>2dqb_A Deoxyguanosinetriphosphate triphosphohydrolase, putative; dntpase, DNTP, single-stranded DNA, DNA, dGTPase, HD superfamily; 2.20A {Thermus thermophilus HB8}
Probab=100.00 E-value=0 Score=909.52 Aligned_cols=366 Identities=40% Similarity=0.610 Sum_probs=333.6
Q ss_pred CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHCCCCEEECCHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 67864658543870333773477888999984340000110273462327574787169998706620888999999999
Q gi|254780286|r 8 GFGHQKKVAYAADPTQSLGRMYPEKRSLTRSEFQRDRDRMIHTTAFRRLKDKTQVFFHRQRDHYRTRLMHTIEVSQIARS 87 (410)
Q Consensus 8 ~~~~~~~~~~a~~~~~~~gR~~~e~~~~~R~~f~rD~dRIi~S~afRRL~~KTQVf~~~~~d~~rtRLtHslEVa~i~rs 87 (410)
.++.+.++|||+++.+++||.+||+++++||||+|||||||||+||||||+||||||+.+||||||||||||||||||||
T Consensus 10 ~~~~~~l~~~a~~~~~~~~R~~~e~~~~~R~~f~rD~dRIi~S~afRRL~~KTQVf~~~~~d~~rtRLTHslEVa~i~rs 89 (376)
T 2dqb_A 10 ELEASRLAPYAQKARDTRGRAHPEPESLYRTPYQKDRDRILHTTAFRRLEYKTQVLPGWAGDYYRTRLTHTLEVAQVSRS 89 (376)
T ss_dssp HHHHHHSCTTSCCGGGCCCCSSCCCCCSSCCHHHHHHHHHHHSHHHHHGGGSCSSSCSCC--CCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHCHHHHHCCHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 88875248854696020388878999999981431404887278776145688263079998537767899999999999
Q ss_pred HHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 99883999889999998886289988654789999997312554577657788754321146701000247888776347
Q gi|254780286|r 88 LARALRIDEDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGGFDHNIQSFRIVTELECSYADFDGINLTWETLEGLIGH 167 (410)
Q Consensus 88 i~~~l~~~~dlvea~~L~HDiGhpPFGH~GE~al~~~~~~~~gFegNaQ~~Rilt~LE~~~~~~~GLNLT~atL~~iiKy 167 (410)
||+.+|+|++||||||||||||||||||+||+||++||+++||||||||||||||+||.+++.++||||||+||+|++||
T Consensus 90 i~~~l~~~~~lvea~~L~HDiGhpPFGH~GE~al~~~~~~~~gFegNaQslRilt~Le~~~~~~~GlnLT~~tl~~i~K~ 169 (376)
T 2dqb_A 90 IARALGLNEDLTEAIALSHDLGHPPFGHTGEHVLNALMQDHGGFEHNAQALRILTHLEVRYPGFRGLNLTYEVLEGIATH 169 (376)
T ss_dssp HHHHTTCCHHHHHHHHHHTTTTCCSSTTHHHHHHHHHTTTTTCCCHHHHHHHHHHTTCBCBTTBSBCCCCHHHHHHHHHS
T ss_pred HHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
T ss_conf 99997547333788886034689987506999999987605898545367787564104688989864647665455403
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 57788644455210014577667640223133667321798656554432120798998753067763001566888999
Q gi|254780286|r 168 NGPILPQDLDKPRIIPRIFSDYYHIHGLSLANFASLEGQVAAIADDIAYDAHDIDDGVRAGLLTVDMLKEISFLEKHIAS 247 (410)
Q Consensus 168 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slEa~iveaADDIAY~~hDlEDai~~gli~~~~l~~~~~~~~~~~~ 247 (410)
||+..+... ......+++|||||||||||||++||||||+++|+|+++++.+++++.....+
T Consensus 170 ~~~~~~~~~------------------~~~~~~~tlEaqIme~ADDIAY~~hDlEDai~~gli~~~~l~e~~l~~~~~~~ 231 (376)
T 2dqb_A 170 EAAYSPGFK------------------PLYEGQGTLEAQVVDLSDAIAYAAHDLDDGFRAGLLHPEELKEVELLQALALE 231 (376)
T ss_dssp CC-----------------------------CCSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCGGGGGGSHHHHHHHHH
T ss_pred CCCCCCCHH------------------HHHHCCCCHHHHHHCCHHCCHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 210042034------------------55533587789985541238553558888986699889998645899999998
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 88654889989999999999999999978886787787515454676442685211147035799999999999985178
Q gi|254780286|r 248 LHDLYGHLDDKRLVHELVRRQITAMVEDVITVSQKRIAHLKPHAIHDIRSAGYRIIDFSDEMTLVDKEIKSMLVKYVYRH 327 (410)
Q Consensus 248 ~~~~~~~~~~~~~~~~l~r~~I~~~i~d~i~~s~~~i~~~~~~~~~di~~~~~~li~fs~~~~~~~k~LK~~l~~~Vy~~ 327 (410)
......... ......+++.+++.+|.+++..+.+++........++++..+..++.+|+++....+.+|+|++++||+|
T Consensus 232 ~~~~~~~~~-~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~i~~~~~~l~~~s~~~~~~~~~lk~fl~~~vy~~ 310 (376)
T 2dqb_A 232 EGLDLLRLP-ELDRRVLVRQLLGYFITAAIEATHRRVEEAGVQSAEAVRRHPSRLAALGEEAEKALKALKAFLMERFYRH 310 (376)
T ss_dssp TTCCTTTCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 744010231-5677899999874799989999999999821302899972520444311100000347899999999489
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHCCCHHCCCEEEHHEECCCCHHHHHHHHHHHH
Q ss_conf 999999999999999999999878884574106776602580000103020006733699999999981
Q gi|254780286|r 328 PSIMTCCNQIANVIRNLFSAYMSDPRKMRGCNQLEYERDMTDSIKARHVGDYLAGMTDSYAIREHHILF 396 (410)
Q Consensus 328 ~~v~~~e~~g~~iI~~Lf~~f~~~p~~l~~~~~~~~~~~~~~~~r~R~V~DYIAGMTD~YAi~ly~kL~ 396 (410)
+.|+.++.+|++||..||+.|+++|+.||..|+..+ ++..+.|+||||||||||+||+++|++||
T Consensus 311 ~~v~~~e~~g~~iI~~Lf~~f~~~p~llp~~~~~~~----~~~~~~R~V~DYIAGMTD~yA~~ly~~L~ 375 (376)
T 2dqb_A 311 PEVLRERRKAEAVLEGLFAAYTRYPELLPREVQAKI----PEEGLERAVCDYIAGMTDRFALEAYRRLS 375 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCGGGSCHHHHTTH----HHHCHHHHHHHHHHTCCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHC----CCCCHHHEEHHHHCCCHHHHHHHHHHHCC
T ss_conf 999999999999999999999859985999999646----66665623021021631779999999709
No 2
>3bg2_A DGTP triphosphohydrolase; structural genomics, NYSGXRC, target 10395N, PSI-2, protein structure initiative; 1.95A {Leeuwenhoekiella blandensis MED217}
Probab=100.00 E-value=0 Score=836.18 Aligned_cols=370 Identities=24% Similarity=0.317 Sum_probs=286.9
Q ss_pred CHHHCCCCCCCCCCCCCCCHHHCCCCEEECCHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC----
Q ss_conf 7033377347788899998434000011027346232757478716999870662088899999999999883999----
Q gi|254780286|r 20 DPTQSLGRMYPEKRSLTRSEFQRDRDRMIHTTAFRRLKDKTQVFFHRQRDHYRTRLMHTIEVSQIARSLARALRID---- 95 (410)
Q Consensus 20 ~~~~~~gR~~~e~~~~~R~~f~rD~dRIi~S~afRRL~~KTQVf~~~~~d~~rtRLtHslEVa~i~rsi~~~l~~~---- 95 (410)
+...+.+|..++ ++++||||||||||||||+||||||+||||||+.+||||||||||||||||||||||+.|+++
T Consensus 12 R~~~~~~~~~~~-~~~~R~~F~rDrdRIi~S~aFRRLq~KTQVf~~~~~D~~rtRLTHSlEVaqiaRsi~~~l~~~l~~~ 90 (444)
T 3bg2_A 12 RQGDTAKRLRIE-QDDTRLGFEVDYDRIIFSAPFRSLQDKTQVIPLSKTDFVHTRLTHSLEVSVVGRSLGRMVGKKLLEK 90 (444)
T ss_dssp CTTCSSCCCGGG-CCGGGCHHHHHHHHHHHSHHHHHGGGCBCSCC---CCCCCBHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCCCCCCCCC-CCCCCCCHHHCCCHHHCCHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 045655788888-8998980530301886689776255788250489998772830599999999999999999999874
Q ss_pred ---------------HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC-----------------CCCCCCCHHHHHHH
Q ss_conf ---------------8899999988862899886547899999973125-----------------54577657788754
Q gi|254780286|r 96 ---------------EDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYG-----------------GFDHNIQSFRIVTE 143 (410)
Q Consensus 96 ---------------~dlvea~~L~HDiGhpPFGH~GE~al~~~~~~~~-----------------gFegNaQ~~Rilt~ 143 (410)
+|||||||||||||||||||+||+||++||+++| |||||||||||||+
T Consensus 91 ~~~~~~~~~~~~~~~~~lvea~~LaHDiGhpPFGH~GE~aL~~~~~~~~~~~~~~~~~~~~~~d~~gFegNaQslRIlt~ 170 (444)
T 3bg2_A 91 YPHLEQVYGYKFNDFGAIVAAAALAHDIGNPPFGHSGEKAIGEFFKNGYGKRYKDSLTAKEYQDLIKFEGNANGFKVLSQ 170 (444)
T ss_dssp STHHHHTTCCCHHHHHHHHHHHHHHTTTTCCTTHHHHHHHHHHHHHTSGGGGGGGGSCHHHHHHHHTCCHHHHHHHHHHC
T ss_pred CCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 80033312344431588999863035458898630059999999984278411101019988763122551788899876
Q ss_pred HHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC------CCCCCH---HHHHHHHHHHCC-------CCCCCCCHHHHH
Q ss_conf 3211467010002478887763475778864445------521001---457766764022-------313366732179
Q gi|254780286|r 144 LECSYADFDGINLTWETLEGLIGHNGPILPQDLD------KPRIIP---RIFSDYYHIHGL-------SLANFASLEGQV 207 (410)
Q Consensus 144 LE~~~~~~~GLNLT~atL~~iiKyp~~~~~~~~~------~~~~~~---~~~~~~~~~~~~-------~~~~~~slEa~i 207 (410)
++ +..++||||||+||+||+||||++.+.... +++.+. ..+.+.....++ .....+++||||
T Consensus 171 l~--~~~~~GLNLT~~tL~gilKyp~~~~~~~~~~~~~~~k~g~~~~e~~~~~~i~~~~~l~~~~~~~~~~~~r~~eaqI 248 (444)
T 3bg2_A 171 SK--PGAQGGLRLSYATLGAFMKYPKESLPHKPSDHIADKKYGFFQSERALFEDVAQELGLLKRSTTDDVSWSRHPLAYL 248 (444)
T ss_dssp CB--TTBTTTTCCCHHHHHHHCSSCBCCC-----------CCSCCGGGHHHHHHHHHHHTCCBC----CCBBCCCTTHHH
T ss_pred HC--CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf 22--3777887578999999995575435677654445456563443789999998763132035311235578908999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 865655443212079899875306776300156688899988654889-9899999999999999999788867877875
Q gi|254780286|r 208 AAIADDIAYDAHDIDDGVRAGLLTVDMLKEISFLEKHIASLHDLYGHL-DDKRLVHELVRRQITAMVEDVITVSQKRIAH 286 (410)
Q Consensus 208 veaADDIAY~~hDlEDai~~gli~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~r~~I~~~i~d~i~~s~~~i~~ 286 (410)
|+|||||||++||||||+++|+|+++++.+..............+... ........+++..|+.+|.+++..+.++...
T Consensus 249 me~ADDIAY~~hDlEDai~~gli~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~I~~lI~~~i~~~~~~~~~ 328 (444)
T 3bg2_A 249 VEAADDICYTIIDFEDGINLGLIPEEYALEYMVKLVGQTIDRNKYNALQETSDRVSYLRALAIGTLINESVDTFMKYEEE 328 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSSCC-------------------CCSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSHHH
T ss_pred HHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99887766515039989753888799999999999866555666533246999999999999999999999999996788
Q ss_pred HCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHH---
Q ss_conf 15454676442685211147035799999999999985178999999999999999999999878884574106776---
Q gi|254780286|r 287 LKPHAIHDIRSAGYRIIDFSDEMTLVDKEIKSMLVKYVYRHPSIMTCCNQIANVIRNLFSAYMSDPRKMRGCNQLEY--- 363 (410)
Q Consensus 287 ~~~~~~~di~~~~~~li~fs~~~~~~~k~LK~~l~~~Vy~~~~v~~~e~~g~~iI~~Lf~~f~~~p~~l~~~~~~~~--- 363 (410)
.... ..+..++..+ +....++.||+|++++||++++|+.++.+|++||.+||+.|++.+...+..+....
T Consensus 329 i~~~------~~~~~Li~~~-~~~~~~~~Lk~f~~~~vy~~~~v~~~e~~g~~iI~~Lf~~~~~~~~~~~~~~~~~~~~~ 401 (444)
T 3bg2_A 329 ILAG------TFDQSLIDKS-NYQAQITDIINLSIERIYNSREVIEKEIAGYEILSTLLEARCRALDNNDTHYNQLIQQL 401 (444)
T ss_dssp HHHT------CCCSCTGGGC-TTHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHH
T ss_pred HHCC------CCCCCCCCCH-HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 7347------6555533674-89999999999999984388999999999999999999999987763726699999986
Q ss_pred -----HHCCCHHCCCEEEHHEECCCCHHHHHHHHHHHHCCC
Q ss_conf -----602580000103020006733699999999981889
Q gi|254780286|r 364 -----ERDMTDSIKARHVGDYLAGMTDSYAIREHHILFGYI 399 (410)
Q Consensus 364 -----~~~~~~~~r~R~V~DYIAGMTD~YAi~ly~kL~G~~ 399 (410)
....+.+.++|+||||||||||+||+++|++|+|+.
T Consensus 402 ~~~~~~~~~~~y~~~r~V~DYIAGMTD~yA~~~y~~L~Gi~ 442 (444)
T 3bg2_A 402 LAPNDHSEKSLYENLIQICAEVSTMTDGKALRNYKKIKGLD 442 (444)
T ss_dssp HC------CCHHHHHHHHHHHHHHSCHHHHHHHHHHHTTC-
T ss_pred CCCCCCCCCCHHHHHCCHHEECCCCHHHHHHHHHHHHHCCC
T ss_conf 06542000373653340110523764989999999816878
No 3
>2pgs_A Putative deoxyguanosinetriphosphate triphosphohydrolase; deoxyguanosinetriphosphate triphsphohydrolase; 2.35A {Pseudomonas syringae PV}
Probab=100.00 E-value=0 Score=831.48 Aligned_cols=378 Identities=25% Similarity=0.312 Sum_probs=286.9
Q ss_pred CCCCCCCCCHHHCCCCCCCCCCCCCCCHHHCCCCEEECCHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 46585438703337734778889999843400001102734623275747871699987066208889999999999988
Q gi|254780286|r 12 QKKVAYAADPTQSLGRMYPEKRSLTRSEFQRDRDRMIHTTAFRRLKDKTQVFFHRQRDHYRTRLMHTIEVSQIARSLARA 91 (410)
Q Consensus 12 ~~~~~~a~~~~~~~gR~~~e~~~~~R~~f~rD~dRIi~S~afRRL~~KTQVf~~~~~d~~rtRLtHslEVa~i~rsi~~~ 91 (410)
+|+-- .+.+..||.++++++++||||||||||||||+||||||+||||||+.+||||||||||||||||||||||+.
T Consensus 4 ~w~~l---l~~~r~~~~~~~~~~~~R~~f~rDr~RIi~S~afRRLq~KTQVf~~~~~d~~rtRLTHslEVaqi~rsia~~ 80 (451)
T 2pgs_A 4 DWQTL---LNRERLGKTLHSPEELGRSPFHKDHDRIIFSGAFRRLGRKTQVHPVSSNDHIHTRLTHSLEVSCVGRSLGMR 80 (451)
T ss_dssp CTTTT---TCCCBC-------------CHHHHHHHHHHSHHHHGGGGCCCCCC-------CCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHH---CCCCCCCCCCCCCCCCCCCCHHHCCCHHHCCHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 75546---283114888788779999806414008865898771446871541799987817067999999999999999
Q ss_pred CCCC--------------HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC-----------------CCCCCCCHHHH
Q ss_conf 3999--------------8899999988862899886547899999973125-----------------54577657788
Q gi|254780286|r 92 LRID--------------EDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYG-----------------GFDHNIQSFRI 140 (410)
Q Consensus 92 l~~~--------------~dlvea~~L~HDiGhpPFGH~GE~al~~~~~~~~-----------------gFegNaQ~~Ri 140 (410)
|+++ ++||||||||||||||||||+||+||++||+++| |||||||||||
T Consensus 81 l~~~~~~~~~~~~~~~~~~~lvea~~L~HDiGHpPFGH~GE~aL~~~~~~~g~~~~~~~~~~~~~~d~~gFe~N~QslRI 160 (451)
T 2pgs_A 81 VGETLRAALPDWCDPSDLGMVVQSACLAHDIGNPPFGHSGEDAIRNWFNQAAGRGWLDAMSETERNDFLNFEGNAQGFRV 160 (451)
T ss_dssp HHHHTGGGSCTTCCHHHHHHHHHHHHHHTTTTCCTTHHHHHHHHHHHHHHHHTTTTTTTSCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 99888762611135410778999999863279998662099999999885468114444216664023565743767688
Q ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC-----CCCCCCHHHHHHHHHH---HCC----CCCCCCCHHHHHH
Q ss_conf 754321146701000247888776347577886444-----5521001457766764---022----3133667321798
Q gi|254780286|r 141 VTELECSYADFDGINLTWETLEGLIGHNGPILPQDL-----DKPRIIPRIFSDYYHI---HGL----SLANFASLEGQVA 208 (410)
Q Consensus 141 lt~LE~~~~~~~GLNLT~atL~~iiKyp~~~~~~~~-----~~~~~~~~~~~~~~~~---~~~----~~~~~~slEa~iv 208 (410)
||+||+++.+ +|||||++||+||+||||+....+. .+++.+......+.+. ..+ .....+++|||||
T Consensus 161 vt~LE~~~~~-~GLNLT~~tL~gilKyp~~~~~~~~~~~~~~k~g~~~~e~~~~~~i~~~~~~~~~~~~~~~~~~ea~Im 239 (451)
T 2pgs_A 161 LTQLEYHQFD-GGTRLTYATLGTYLKYPWTARHADSLGYKKHKFGCYQSELPILEQIAGKLGLPQLEEQRWARHPLVYLM 239 (451)
T ss_dssp HHTTSSBTTT-TBTCCBHHHHHHHCSSCBBCC--------CCCCCBCTTTHHHHHHHHHHHTCCCCBTTBCCCCTTHHHH
T ss_pred HHHCCCCCCC-CCCCCCHHHHCCHHCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
T ss_conf 6612115777-754267998600230776555654210222035544103689999987607843000134378689999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH--HHHHHHH-HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 65655443212079899875306776300156--6888999-88654889989999999999999999978886787787
Q gi|254780286|r 209 AIADDIAYDAHDIDDGVRAGLLTVDMLKEISF--LEKHIAS-LHDLYGHLDDKRLVHELVRRQITAMVEDVITVSQKRIA 285 (410)
Q Consensus 209 eaADDIAY~~hDlEDai~~gli~~~~l~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~l~r~~I~~~i~d~i~~s~~~i~ 285 (410)
+|||||||++||||||+++|+|+++++.++.+ +...+.+ .....+..........+++..|+.+++.++..+.++.
T Consensus 240 d~ADDIAY~~HDlEDair~gli~~~~l~~~~~~~~~~~~~e~~~~l~~~~~~~~~~~~l~~~~I~~li~~~~~~~i~~~- 318 (451)
T 2pgs_A 240 EAADDICYALIDLEDGLEMDLLDYAEVESLLLGLVGDDLPETYRQLGPGDSRRRKLAILRGKAIEHLTNAAARAFVEQQ- 318 (451)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHTTCC----------------CHHHHHHHHHHHHHHHHHHHHHHTTTS-
T ss_pred HHHHHHCHHHHEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf 9866323102048768870778899999988999867679999862422567899999999999999999999999849-
Q ss_pred HHCHHHHHHHHH---CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHC-----CC
Q ss_conf 515454676442---6852111470357999999999999851789999999999999999999998788845-----74
Q gi|254780286|r 286 HLKPHAIHDIRS---AGYRIIDFSDEMTLVDKEIKSMLVKYVYRHPSIMTCCNQIANVIRNLFSAYMSDPRKM-----RG 357 (410)
Q Consensus 286 ~~~~~~~~di~~---~~~~li~fs~~~~~~~k~LK~~l~~~Vy~~~~v~~~e~~g~~iI~~Lf~~f~~~p~~l-----~~ 357 (410)
+.+.. ....+..+++++...+..+|+|++++||+++.|+.++.+|+++|..||+.|+..+... +.
T Consensus 319 -------~~i~~g~~~~~li~~~~~~~~~~~~~lk~~~~~~iy~~~~v~~~e~~~~~ii~~L~~~~~~~~~~~~~~~~~~ 391 (451)
T 2pgs_A 319 -------DALLAGTLPGDLVEHMHGPAKRCVLNAKDMARKKIFQDKRKTLHEIGAYTTLEILLNAFCGAAVEQFGGRTPS 391 (451)
T ss_dssp -------HHHHSSCCSSCGGGGSCHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCCC
T ss_pred -------HHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf -------9998312346511112789999999999999999418899999999999999999999998687642102730
Q ss_pred CHHHHHH---------HCCCHHCCCEEEHHEECCCCHHHHHHHHHHHHCCCCC
Q ss_conf 1067766---------0258000010302000673369999999998188988
Q gi|254780286|r 358 CNQLEYE---------RDMTDSIKARHVGDYLAGMTDSYAIREHHILFGYIPD 401 (410)
Q Consensus 358 ~~~~~~~---------~~~~~~~r~R~V~DYIAGMTD~YAi~ly~kL~G~~p~ 401 (410)
.+...+. ...+.+.+.|+||||||||||+||+++|++|+|.+||
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~r~V~DyIAGMTD~yA~~ly~~L~G~s~~ 444 (451)
T 2pgs_A 392 FKHRRILDLLGNSAPDPKAPLHASFLRMIDFIAGMTDSYASEMAREMTGRSGE 444 (451)
T ss_dssp TTHHHHHHTTTTSSCCTTSCHHHHHHHHHHHHHTSCHHHHHHHHHTC------
T ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
T ss_conf 78999998643205674357678888998520066388999999974295999
No 4
>2hek_A Hypothetical protein; predominantly alpha helical protein with GDP binding site and active site being FAR from EACH other, structural genomics; HET: GDP; 2.00A {Aquifex aeolicus} SCOP: a.211.1.1
Probab=100.00 E-value=3.1e-35 Score=278.58 Aligned_cols=108 Identities=28% Similarity=0.391 Sum_probs=95.7
Q ss_pred HHHCCCCEEECCHHHHHHCCCCEEEECCC--CCCCCCCHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHCCCCCCCC
Q ss_conf 43400001102734623275747871699--98706620888999999999998839998-8999999888628998865
Q gi|254780286|r 39 EFQRDRDRMIHTTAFRRLKDKTQVFFHRQ--RDHYRTRLMHTIEVSQIARSLARALRIDE-DLVEAIALAHDFGHPPFGH 115 (410)
Q Consensus 39 ~f~rD~dRIi~S~afRRL~~KTQVf~~~~--~d~~rtRLtHslEVa~i~rsi~~~l~~~~-dlvea~~L~HDiGhpPFGH 115 (410)
++..+..|||+|++|||||+||||+|+.. ++++||||||||||+++||++|+.|+.+. ++|++|||+||||||||||
T Consensus 14 ~~~~~~~riI~s~~fqRLr~~~Qlg~~~~v~p~a~htR~~HSLgV~~lar~~~~~L~~~~~~~v~~A~LlHDIGH~PFsH 93 (371)
T 2hek_A 14 RVGEAGLRLIDSFPFQRLRYVKQLGLAYLVFPSAQHTRFEHSLGVYHITERICESLKVKEKELVKLAGLLHDLGHPPFSH 93 (371)
T ss_dssp EEEHHHHHHHTSHHHHGGGGSBTTTTGGGTSTTCCCBHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHTTTTTCCSSSS
T ss_pred ECCHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC
T ss_conf 62889999819976714356612785533179981663019999999999999997543388999999987137785520
Q ss_pred CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 4789999997312554577657788754321
Q gi|254780286|r 116 VGEDVLQELLSSYGGFDHNIQSFRIVTELEC 146 (410)
Q Consensus 116 ~GE~al~~~~~~~~gFegNaQ~~Rilt~LE~ 146 (410)
+||++++.|+...++++++.+..++...++.
T Consensus 94 ~gE~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (371)
T 2hek_A 94 TTEVLLPRERSHEDFTERVIKETEIYEILKQ 124 (371)
T ss_dssp CHHHHSTTSSSCCCHHHHHHHHSHHHHHHHT
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 5767610014530468998753089999987
No 5
>3irh_A HD domain protein; phosphohydrolase, dntpase, structural genomics, PSI-2, protein structure initiative; HET: DGT DTP; 2.40A {Enterococcus faecalis V583} PDB: 2o6i_A*
Probab=99.80 E-value=8.8e-19 Score=156.93 Aligned_cols=101 Identities=23% Similarity=0.388 Sum_probs=80.8
Q ss_pred CCCCCHHHCC---CCEEECCHHHHHHCCCCE------EEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC-----------
Q ss_conf 9999843400---001102734623275747------87169998706620888999999999998839-----------
Q gi|254780286|r 34 SLTRSEFQRD---RDRMIHTTAFRRLKDKTQ------VFFHRQRDHYRTRLMHTIEVSQIARSLARALR----------- 93 (410)
Q Consensus 34 ~~~R~~f~rD---~dRIi~S~afRRL~~KTQ------Vf~~~~~d~~rtRLtHslEVa~i~rsi~~~l~----------- 93 (410)
|+.=...+-| --+||.|++|.||.+.+| |||-. .|||.+|||.|+++|+.+++.|.
T Consensus 42 Dpihg~I~~~~~~~~~iIdtp~fQRLR~IkQLG~~~lVfPgA----~HtRfeHSLGv~~la~~~~~~l~~~~~~~~~~~~ 117 (480)
T 3irh_A 42 DPVHNYIHVQHQVILDLINSAEVQRLRRIKQLGTSSFTFHGA----EHSRFSHSLGVYEITRRICEIFQRNYSVERLGEN 117 (480)
T ss_dssp ETTTEEEEEEEHHHHHHHTSHHHHGGGGSBSSTTGGGTSTTC----CCBHHHHHHHHHHHHHHHHHHHHHHSBHHHHGGG
T ss_pred CCCCCEEEECHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 698730896879999862997772225565478656378898----3072349999999999999999861541002445
Q ss_pred -CC---HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf -99---889999998886289988654789999997312554577657788754321
Q gi|254780286|r 94 -ID---EDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGGFDHNIQSFRIVTELEC 146 (410)
Q Consensus 94 -~~---~dlvea~~L~HDiGhpPFGH~GE~al~~~~~~~~gFegNaQ~~Rilt~LE~ 146 (410)
++ ..++.+|||.|||||+||+|++|... ++.|+.+|.+++..++.
T Consensus 118 ~~~~~~~~~~~~AaLlHDiGHgPFSH~~E~~~--------~~~He~~s~~ii~~~~~ 166 (480)
T 3irh_A 118 GWNDDERLITLCAALLHDVGHGPYSHTFEHIF--------DTNHEAITVQIITSPET 166 (480)
T ss_dssp SBCGGGHHHHHHHHHHTTTTCCTTHHHHHHHH--------CCCHHHHHHHHHHCTTS
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCC--------CCCHHHHHHHHHHHHHH
T ss_conf 66778899999999986148783211023002--------43357889999972456
No 6
>2q14_A Phosphohydrolase; BT4208, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE ADP; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.69 E-value=2.4e-16 Score=138.96 Aligned_cols=93 Identities=28% Similarity=0.427 Sum_probs=80.1
Q ss_pred CEEECCHHHHHHCCCCE------EEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC-----CCH---HHHHHHHHHHHCCC
Q ss_conf 01102734623275747------87169998706620888999999999998839-----998---89999998886289
Q gi|254780286|r 45 DRMIHTTAFRRLKDKTQ------VFFHRQRDHYRTRLMHTIEVSQIARSLARALR-----IDE---DLVEAIALAHDFGH 110 (410)
Q Consensus 45 dRIi~S~afRRL~~KTQ------Vf~~~~~d~~rtRLtHslEVa~i~rsi~~~l~-----~~~---dlvea~~L~HDiGh 110 (410)
-+||-|+.|.||.+.+| |||... |||.+|||.|+.+|+.+++.|. +.+ .+|++|||.|||||
T Consensus 25 ~~iidt~~fqRLr~ikQlg~~~~v~p~a~----HtRfeHSlGv~~la~~~~~~l~~~~~~~~~~~~~~~~~AaLlHDiGH 100 (410)
T 2q14_A 25 YDIVRHPLLQRLTRIKQVGLSSVVYPGAQ----HTRFQHSLGAFYLMSEAITQLTSKGNFIFDSEAEAVQAAILLHDIGH 100 (410)
T ss_dssp HHHHHSHHHHGGGGSBTTTTTTTTCTTCC----CBHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTTTC
T ss_pred HHHCCCHHHHCCCCCCCCCCCCCCCCCCC----CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 98629976720068653786767689983----37000999999999999999985288898789999999999872688
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
Q ss_conf 9886547899999973125545776577887543211
Q gi|254780286|r 111 PPFGHVGEDVLQELLSSYGGFDHNIQSFRIVTELECS 147 (410)
Q Consensus 111 pPFGH~GE~al~~~~~~~~gFegNaQ~~Rilt~LE~~ 147 (410)
+||+|++|+++. .+++|+..|.+++..+...
T Consensus 101 ~PfSH~~E~~~~------~~~~He~~~~~i~~~~~~~ 131 (410)
T 2q14_A 101 GPFSHVLEDTIV------QGVSHEEISLMLMERMNKE 131 (410)
T ss_dssp CTTHHHHHTTTS------TTCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHC------CCCCHHHHHHHHHHHHHHH
T ss_conf 843012435402------6875178899999988765
No 7
>2o08_A BH1327 protein; putative HD superfamily hydrolase, structural genomics, JOIN for structural genomics, JCSG; HET: UNL PG4 DGI; 1.90A {Bacillus halodurans}
Probab=98.87 E-value=2.9e-09 Score=86.58 Aligned_cols=122 Identities=21% Similarity=0.101 Sum_probs=80.3
Q ss_pred CCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC------
Q ss_conf 74787169998706620888999999999998839998899999988862899886547899999973125545------
Q gi|254780286|r 59 KTQVFFHRQRDHYRTRLMHTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGGFD------ 132 (410)
Q Consensus 59 KTQVf~~~~~d~~rtRLtHslEVa~i~rsi~~~l~~~~dlvea~~L~HDiGhpPFGH~GE~al~~~~~~~~gFe------ 132 (410)
.||++.+-++..--+|+.||+.||.+|+.||+.+|+|++++..|||.||||..++.+...........+...++
T Consensus 4 ~~~~~~~~~~~~~e~r~~Hs~~Va~~A~~lA~~~gld~~~~~~agLlHDIGk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (188)
T 2o08_A 4 RGKALQLVKPHLTEHRYQHTIGVMETAIDLAKLYGADQQKAELAAIFHDYAKFRDKNEMRTLIREKLSQQDILFYGDELL 83 (188)
T ss_dssp HHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTTTSCHHHHHHHHHHHCSCCGGGGSCGGGS
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCC
T ss_conf 99999999974887674999999999999999809399999999999872355787999999874355137888610124
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 77657788754321146701000247888776347577886444552100145776676402231336673217986565
Q gi|254780286|r 133 HNIQSFRIVTELECSYADFDGINLTWETLEGLIGHNGPILPQDLDKPRIIPRIFSDYYHIHGLSLANFASLEGQVAAIAD 212 (410)
Q Consensus 133 gNaQ~~Rilt~LE~~~~~~~GLNLT~atL~~iiKyp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slEa~iveaAD 212 (410)
|-.-|..++... -.++.-+++.+|.-|..+.. ..+.++.|+-.||
T Consensus 84 H~~~g~~~~~~~--------~~~~~~~v~~aI~~H~~g~~---------------------------~~~~~~~Iv~~AD 128 (188)
T 2o08_A 84 HAPCGAYYVREE--------VGIEDEDVLQAIRFHTTGRP---------------------------NMSLLEKIIFLAD 128 (188)
T ss_dssp HHHHHHHHHHHH--------HCCCCHHHHHHHHTTTTCCT---------------------------TCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--------CCCCHHHHHHHHHHHCCCCC---------------------------CCCHHHHHHHHHH
T ss_conf 799999999756--------48987999999998587989---------------------------9887999999999
Q ss_pred HHH
Q ss_conf 544
Q gi|254780286|r 213 DIA 215 (410)
Q Consensus 213 DIA 215 (410)
-|+
T Consensus 129 ~i~ 131 (188)
T 2o08_A 129 YIE 131 (188)
T ss_dssp HHS
T ss_pred HHC
T ss_conf 814
No 8
>2ogi_A Hypothetical protein SAG1661; NP_688652.1, conserved hypothetical protein TIGR00488, structural genomics; HET: GDP MES; 1.85A {Streptococcus agalactiae serogroup V}
Probab=98.31 E-value=5.5e-05 Score=54.93 Aligned_cols=105 Identities=20% Similarity=0.207 Sum_probs=65.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC----------CCCCCCHHHHH
Q ss_conf 66208889999999999988399988999999888628998865478999999731255----------45776577887
Q gi|254780286|r 72 RTRLMHTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGG----------FDHNIQSFRIV 141 (410)
Q Consensus 72 rtRLtHslEVa~i~rsi~~~l~~~~dlvea~~L~HDiGhpPFGH~GE~al~~~~~~~~g----------FegNaQ~~Ril 141 (410)
..|+.||+.||.+|+.||+.+|+|++.+..|||.||||-- +..|+.++..-+ ++. ..|-.-|-.++
T Consensus 25 ~~r~~Hs~~Va~lA~~lA~~~g~d~~~~~~AgLLHDIGK~---~~~~~~l~~~~~-~~~~~d~~~~~~~~~H~~~g~~~l 100 (196)
T 2ogi_A 25 DKRFNHVLGVERAAIELAERYGYDKEKAGLAALLHDYAKE---LSDDEFLRLIDK-YQPDPDLKKWGNNIWHGLVGIYKI 100 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTTT---CCHHHHHHHHHH-HCCCTGGGGSCHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC---CCHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 5474999999999999999909499999999999970465---685999998875-489855988600123899999999
Q ss_pred HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 54321146701000247888776347577886444552100145776676402231336673217986565544
Q gi|254780286|r 142 TELECSYADFDGINLTWETLEGLIGHNGPILPQDLDKPRIIPRIFSDYYHIHGLSLANFASLEGQVAAIADDIA 215 (410)
Q Consensus 142 t~LE~~~~~~~GLNLT~atL~~iiKyp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slEa~iveaADDIA 215 (410)
... .| ....+++++|..|.... ...+.++.|+-+||-|.
T Consensus 101 ~~~-------~~-~~~~~i~~aI~~H~~g~---------------------------~~~~~~~kIv~~AD~l~ 139 (196)
T 2ogi_A 101 QED-------LA-IKDQDILAAIAKHTVGS---------------------------AQMSTLDKIVYVADYIE 139 (196)
T ss_dssp HHH-------SC-CCCHHHHHHHHTTTTCC---------------------------SSCCHHHHHHHHHHHHC
T ss_pred HHH-------CC-CCHHHHHHHHHHHCCCC---------------------------CCCCHHHHHHHHHHHCC
T ss_conf 866-------28-98199999999748899---------------------------99898999999897527
No 9
>3ccg_A HD superfamily hydrolase; NP_347894.1, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Clostridium acetobutylicum atcc 824}
Probab=98.21 E-value=2.5e-05 Score=57.54 Aligned_cols=106 Identities=20% Similarity=0.142 Sum_probs=68.4
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH----------CCCCCCCCCHHHHHH
Q ss_conf 6208889999999999988399988999999888628998865478999999731----------255457765778875
Q gi|254780286|r 73 TRLMHTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVGEDVLQELLSS----------YGGFDHNIQSFRIVT 142 (410)
Q Consensus 73 tRLtHslEVa~i~rsi~~~l~~~~dlvea~~L~HDiGhpPFGH~GE~al~~~~~~----------~~gFegNaQ~~Rilt 142 (410)
.|..||+.||..++.||+.+|+|++.+..|||.||||-- +.-+..+...-+. ..++.|..=|-.++.
T Consensus 19 ~r~~Hs~~Va~la~~lA~~~g~d~~~~~~agLlHDIGK~---~~~~~~l~~~~~~~~~~~~~e~~~~~~~H~~~ga~il~ 95 (190)
T 3ccg_A 19 KRYKHSLGVMDTAVRLAGIYNEDTEKARIAGLVHDCAKK---LPGEKIIEICTNEGYELGDEDIRNSYLLHGLAGRILAK 95 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTTT---SCHHHHHHHHHHTTCCCCHHHHTTTTC-CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC---CCHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHH
T ss_conf 571799999999999999919599999999999861554---68799999987526774499986531126999999989
Q ss_pred HHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 43211467010002478887763475778864445521001457766764022313366732179865655443
Q gi|254780286|r 143 ELECSYADFDGINLTWETLEGLIGHNGPILPQDLDKPRIIPRIFSDYYHIHGLSLANFASLEGQVAAIADDIAY 216 (410)
Q Consensus 143 ~LE~~~~~~~GLNLT~atL~~iiKyp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slEa~iveaADDIAY 216 (410)
..- -.+.-+++.+|..|.... ...+++++|+-+||-|..
T Consensus 96 ~~~--------~~~~~~i~~aI~~H~~g~---------------------------~~~~~~~kIv~~AD~i~~ 134 (190)
T 3ccg_A 96 KVI--------GIDDEDVLNAIEFHTTGR---------------------------PNMSLLEKIIYIADYIEP 134 (190)
T ss_dssp HTT--------CCCCHHHHHHHHTTTTCC---------------------------SSCCHHHHHHHHHHHHST
T ss_pred HHC--------CCCHHHHHHHHHHHCCCC---------------------------CCCCHHHHHHHHHHHHCC
T ss_conf 774--------798699999998629899---------------------------998989999999988477
No 10
>2pq7_A Predicted HD superfamily hydrolase; 104161995, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.45A {Uncultured thermotogales bacterium} SCOP: a.211.1.1
Probab=97.68 E-value=9.5e-05 Score=53.19 Aligned_cols=99 Identities=23% Similarity=0.262 Sum_probs=62.2
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 20888999999999998839998899999988862899886547899999973125545776577887543211467010
Q gi|254780286|r 74 RLMHTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGGFDHNIQSFRIVTELECSYADFDG 153 (410)
Q Consensus 74 RLtHslEVa~i~rsi~~~l~~~~dlvea~~L~HDiGhpPFGH~GE~al~~~~~~~~gFegNaQ~~Rilt~LE~~~~~~~G 153 (410)
-+.|+.-|.+.|+.|++..+.|.++|++|||.||||.|- . ...+.+|...+-+++..+=.. -|
T Consensus 34 d~~H~~RV~~~A~~Ia~~e~~D~~vv~lAALLHDIg~~k-----------~--~~~~~~h~~~~a~~a~~~L~~----~~ 96 (220)
T 2pq7_A 34 DISHTFRVMENASEIASREKCDLQKAIIAALLHDIKRPH-----------E--ALTGVDHAESGAEYASGLLPT----MG 96 (220)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTHHH-----------H--HHHCCCHHHHHHHHHHHHGGG----GT
T ss_pred CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------H--CCCCCCHHHHHHHHHHHHHHH----CC
T ss_conf 889999999999999988599999999999985540386-----------4--267534899999999999987----79
Q ss_pred CCHHH--HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 00247--88877634757788644455210014577667640223133667321798656554
Q gi|254780286|r 154 INLTW--ETLEGLIGHNGPILPQDLDKPRIIPRIFSDYYHIHGLSLANFASLEGQVAAIADDI 214 (410)
Q Consensus 154 LNLT~--atL~~iiKyp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slEa~iveaADDI 214 (410)
+.-+. .+..+|.-|..+.. ....++|++||.-||-+
T Consensus 97 ~~~~~i~~I~~~I~~hs~~~~-------------------------~~~~sle~~Iv~DADrL 134 (220)
T 2pq7_A 97 FDISFVAEVSKAIRSHRYSGG-------------------------LTPTSLTGKILQDADRL 134 (220)
T ss_dssp CCHHHHHHHHHHHHHCC------------------------------CCCSHHHHHHHHHHHG
T ss_pred CCHHHHHHHHHHHHHCCCCCC-------------------------CCCCCHHHHHHHHHHHH
T ss_conf 999999999999998076557-------------------------77688599999999977
No 11
>3djb_A Hydrolase, HD family; all alpha-helical protein., structural genomics, PSI-2, protein structure initiative; 2.90A {Bacillus thuringiensis serovarkonkukian} SCOP: a.211.1.1
Probab=97.65 E-value=6.6e-05 Score=54.38 Aligned_cols=51 Identities=24% Similarity=0.253 Sum_probs=43.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHH
Q ss_conf 987066208889999999999988399988999999888628998865478
Q gi|254780286|r 68 RDHYRTRLMHTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVGE 118 (410)
Q Consensus 68 ~d~~rtRLtHslEVa~i~rsi~~~l~~~~dlvea~~L~HDiGhpPFGH~GE 118 (410)
++.--+-+.|++-|.+.|+.|++..+.|.++|++|||.||||.++..+.++
T Consensus 20 ~~~~~Hd~~Hi~RV~~~A~~Ia~~e~~D~~vv~~AAlLHDigd~k~~~~~~ 70 (223)
T 3djb_A 20 KDASGHDWYHIRRVHKMAISLSEQEGGNRFIIEMAALLHDVADEKLNESEE 70 (223)
T ss_dssp SSSCTTTHHHHHHHHHHHHHHHTTTCSCHHHHHHHHTTHHHHC--CCSSST
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHH
T ss_conf 699865889999999999999988599899999999996415412352456
No 12
>3dto_A BH2835 protein; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Bacillus halodurans} SCOP: a.211.1.1
Probab=97.65 E-value=0.00014 Score=51.98 Aligned_cols=46 Identities=22% Similarity=0.245 Sum_probs=40.9
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHH
Q ss_conf 6208889999999999988399988999999888628998865478
Q gi|254780286|r 73 TRLMHTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVGE 118 (410)
Q Consensus 73 tRLtHslEVa~i~rsi~~~l~~~~dlvea~~L~HDiGhpPFGH~GE 118 (410)
+-+.|++-|.+.|+.|++..+.|.++|++|||.||||.++.+...|
T Consensus 25 Hd~~H~~RV~~~A~~Ia~~e~~D~~vv~lAAlLHDig~~k~~~~~~ 70 (223)
T 3dto_A 25 HDWYHIRRVTLMAKAIGEQEKVDVFVVQIAALFHDLIDDKLVDDPE 70 (223)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSTTC-------C
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHH
T ss_conf 7889999999999999988488899999999973102244577567
No 13
>3gw7_A Uncharacterized protein YEDJ; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Escherichia coli k-12}
Probab=97.57 E-value=7.6e-05 Score=53.92 Aligned_cols=45 Identities=20% Similarity=0.113 Sum_probs=40.1
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCH
Q ss_conf 620888999999999998839998899999988862899886547
Q gi|254780286|r 73 TRLMHTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVG 117 (410)
Q Consensus 73 tRLtHslEVa~i~rsi~~~l~~~~dlvea~~L~HDiGhpPFGH~G 117 (410)
.-+.|++-|.+.|+.|+...+.|.++|++|||.||||-.+..|.+
T Consensus 25 Hd~~Hi~RV~~~A~~Ia~~e~~D~~vv~lAALLHDIg~~k~~~~~ 69 (239)
T 3gw7_A 25 HDVCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVSLAKNHPQ 69 (239)
T ss_dssp --CCHHHHHHHHHHHHTTTSCSCTTHHHHHHHHTTTTC-------
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHCCCCC
T ss_conf 888999999999999998749889999999997245510026883
No 14
>3b57_A LIN1889 protein; Q92AN1, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 3.00A {Listeria innocua CLIP11262} SCOP: a.211.1.1
Probab=97.31 E-value=0.00047 Score=48.06 Aligned_cols=46 Identities=17% Similarity=0.147 Sum_probs=40.4
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHH
Q ss_conf 6208889999999999988399988999999888628998865478
Q gi|254780286|r 73 TRLMHTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVGE 118 (410)
Q Consensus 73 tRLtHslEVa~i~rsi~~~l~~~~dlvea~~L~HDiGhpPFGH~GE 118 (410)
+-.-|++-|.+.|+.|++..+.|.++|++|||.||||.++..+..+
T Consensus 25 Hd~~H~~RV~~~A~~Ia~~e~~D~~vv~~AAlLHDig~~k~~~~~~ 70 (209)
T 3b57_A 25 HDWSHIKRVWKLSKEIQSKEGGDLFTIELAALFHDYSDIKLTTDEQ 70 (209)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHTTCCC-------C
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHCCCCCHH
T ss_conf 6889999999999999987599899999999983200001477265
No 15
>2qgs_A Protein Se1688; alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Staphylococcus epidermidis atcc 12228} SCOP: a.211.1.1
Probab=97.27 E-value=0.00067 Score=46.94 Aligned_cols=50 Identities=22% Similarity=0.140 Sum_probs=41.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHCCCCCCCCCHH
Q ss_conf 87066208889999999999988399-988999999888628998865478
Q gi|254780286|r 69 DHYRTRLMHTIEVSQIARSLARALRI-DEDLVEAIALAHDFGHPPFGHVGE 118 (410)
Q Consensus 69 d~~rtRLtHslEVa~i~rsi~~~l~~-~~dlvea~~L~HDiGhpPFGH~GE 118 (410)
|..-+-+.|++-|...|..|+...+. |..+|++|||.||||.++..|..+
T Consensus 21 ~~~~Hd~~H~~RV~~~A~~Ia~~e~~~D~~vv~~AAlLHDigd~k~~~~~~ 71 (225)
T 2qgs_A 21 DTTGHDIAHVERVYNNACYIAKRENITDTLVIELSSLLHDTVDSKLTDEIL 71 (225)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHHTTTTCCSSSCHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHH
T ss_conf 998668799999999999999884988599999999987313212345167
No 16
>2pjq_A Uncharacterized protein LP_2664; LPR71, NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactobacillus plantarum WCFS1} SCOP: a.211.1.1
Probab=97.04 E-value=0.0014 Score=44.58 Aligned_cols=46 Identities=28% Similarity=0.270 Sum_probs=39.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 9870662088899999999999883999889999998886289988
Q gi|254780286|r 68 RDHYRTRLMHTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPF 113 (410)
Q Consensus 68 ~d~~rtRLtHslEVa~i~rsi~~~l~~~~dlvea~~L~HDiGhpPF 113 (410)
+|.--+-+-|++-|...|+.|++..+.|.++|++|||.||||.++.
T Consensus 25 ~d~s~Hd~~Hv~RV~~~A~~Ia~~e~~D~~vv~~AAlLHDi~d~k~ 70 (231)
T 2pjq_A 25 HDHSGHGRDHLQRVNRLARRLAKDEGANLNLTLAAAWLHDVIDDKL 70 (231)
T ss_dssp TCCSSCSHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHC---
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 5888678799999999999999884999999999999971046446
No 17
>3m1t_A Putative phosphohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE GOL; 1.62A {Shewanella amazonensis}
Probab=96.67 E-value=0.00079 Score=46.41 Aligned_cols=131 Identities=16% Similarity=0.080 Sum_probs=76.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
Q ss_conf 98706620888999999999998839998899999988862899886547899999973125545776577887543211
Q gi|254780286|r 68 RDHYRTRLMHTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGGFDHNIQSFRIVTELECS 147 (410)
Q Consensus 68 ~d~~rtRLtHslEVa~i~rsi~~~l~~~~dlvea~~L~HDiGhpPFGH~GE~al~~~~~~~~gFegNaQ~~Rilt~LE~~ 147 (410)
+...+.=..||+.||.+++.|++.++.+++-+-.++|.||||-....+...+.-..+..... .+. .+ ..+|..
T Consensus 100 ~~~~~~~w~~s~~~A~~a~~la~~~~~~~~~a~~agLLhdiG~l~l~~~~~~~~~~i~~~~~---~~~-~~---~~~E~~ 172 (275)
T 3m1t_A 100 GFDLADFWGNTFEVAIICQELAKRLGTLPEEAFTCGILHSIGELLIVNGDPAVAATISAAVA---DGA-DR---NLMEKE 172 (275)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTHHHHHHHHHCHHHHHHHHHHHH---TTC-CH---HHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCC-CH---HHHHHH
T ss_conf 46899999999999999999998702369999998888778999998766789999999872---799-88---999999
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH-HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 4670100024788877634757788644455210014577667-6402231336673217986565544321207
Q gi|254780286|r 148 YADFDGINLTWETLEGLIGHNGPILPQDLDKPRIIPRIFSDYY-HIHGLSLANFASLEGQVAAIADDIAYDAHDI 221 (410)
Q Consensus 148 ~~~~~GLNLT~atL~~iiKyp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~slEa~iveaADDIAY~~hDl 221 (410)
=+..|++.+++.+--.|...+. +.+.. .-.........+..+.++.+||-||-.....
T Consensus 173 -----~~g~~h~~ig~~l~~~W~lp~~-----------i~~~I~~hh~p~~~~~~~~l~~iv~lA~~la~~~~~~ 231 (275)
T 3m1t_A 173 -----LLGYDNAEIGALLAQSWKFTPH-----------LVKGIQFQNHPKSAEPYSKLAGMLAMAKQIAADWDKI 231 (275)
T ss_dssp -----HHSSCHHHHHHHHHHHTTCCHH-----------HHHHHHTTTCGGGCSSCCHHHHHHHHHHHHHHHGGGS
T ss_pred -----HHCCCHHHHHHHHHHHCCCCHH-----------HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf -----9788899999999987089899-----------9999998659555788877999999999999857879
No 18
>3hc1_A Uncharacterized HDOD domain protein; HDOD domain protein with unknown function, structural genomics; 1.90A {Geobacter sulfurreducens}
Probab=96.43 E-value=0.0015 Score=44.45 Aligned_cols=135 Identities=15% Similarity=0.082 Sum_probs=70.1
Q ss_pred EECCCCCCCCCCH-HHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH
Q ss_conf 7169998706620-888999999999998839-99889999998886289988654789999997312554577657788
Q gi|254780286|r 63 FFHRQRDHYRTRL-MHTIEVSQIARSLARALR-IDEDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGGFDHNIQSFRI 140 (410)
Q Consensus 63 f~~~~~d~~rtRL-tHslEVa~i~rsi~~~l~-~~~dlvea~~L~HDiGhpPFGH~GE~al~~~~~~~~gFegNaQ~~Ri 140 (410)
|+...+.+-..++ .||+.||.+++.|++.++ .+++.+-+++|.||||-..+-+.-.+.-.++... -+.+..++.
T Consensus 107 ~~~~~~~~~~~~~w~hS~~~A~~a~~lA~~~~~~~~~~a~~aGLLhdiG~l~l~~~~~~~~~~i~~~---~~~~~~~~~- 182 (305)
T 3hc1_A 107 FKTGKGPLNRSTLWAHSLGVARIAKLIAERTGFLNPVNVYVAGLLHDVGEVFINFFRGKEFSQVVTL---VDEEKITFG- 182 (305)
T ss_dssp HHSCCCSSCHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHTTTHHHHHHHHHSHHHHHHHHHH---HHHHCCCHH-
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCCCCCHH-
T ss_conf 6467530268999999999999999999873789999999999998149999977657989999999---865799989-
Q ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 75432114670100024788877634757788644455210014577667640223133667321798656554432
Q gi|254780286|r 141 VTELECSYADFDGINLTWETLEGLIGHNGPILPQDLDKPRIIPRIFSDYYHIHGLSLANFASLEGQVAAIADDIAYD 217 (410)
Q Consensus 141 lt~LE~~~~~~~GLNLT~atL~~iiKyp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slEa~iveaADDIAY~ 217 (410)
..|.+ =+..|++.+++.+---|...+.- -......... ...... ....+++|-+||-||=.
T Consensus 183 --~~E~~-----~~g~~h~~ig~~l~~~W~lP~~i-------~~~i~~hh~p-~~~~~~-~~~l~~iv~lA~~l~~~ 243 (305)
T 3hc1_A 183 --QAEER-----LFGTSHCEVGFALAKRWSLNEFI-------CDTILYHHDI-EAVPYK-QAAIVAMVAFADEYCTL 243 (305)
T ss_dssp --HHHHH-----HHSSCHHHHHHHHHHHTTCCHHH-------HHHHHHTTCG-GGCSSS-CCHHHHHHHHHHHHHHH
T ss_pred --HHHHH-----HHCCCHHHHHHHHHHHCCCCHHH-------HHHHHHHCCC-CCCCCC-CHHHHHHHHHHHHHHHH
T ss_conf --99999-----96879999999999986989999-------9999986692-327856-11396999999999998
No 19
>3mem_A Putative signal transduction protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.25A {Marinobacter aquaeolei}
Probab=94.64 E-value=0.061 Score=32.46 Aligned_cols=68 Identities=13% Similarity=0.245 Sum_probs=34.4
Q ss_pred HHCCCCEEECCHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHCCC-CCCCCC
Q ss_conf 340000110273462327574787169998706620888999999999998839-99889999998886289-988654
Q gi|254780286|r 40 FQRDRDRMIHTTAFRRLKDKTQVFFHRQRDHYRTRLMHTIEVSQIARSLARALR-IDEDLVEAIALAHDFGH-PPFGHV 116 (410)
Q Consensus 40 f~rD~dRIi~S~afRRL~~KTQVf~~~~~d~~rtRLtHslEVa~i~rsi~~~l~-~~~dlvea~~L~HDiGh-pPFGH~ 116 (410)
.+.|-++|+-+--++-=.+.-+|. ++. +|.+-...+++-+|+.+. .++.=+....-++++|- |||||.
T Consensus 25 ~~i~~~~~~Ktvll~~~~g~v~~v-~p~--------~~~ldl~~l~~~~g~~~~~~~~~~~~~~~~~~~~G~vpp~g~~ 94 (457)
T 3mem_A 25 SQIDTGHLLRMVLLSDDQGNLQAI-CRR--------NDMLDLEALNKRLGRDLRMMQRREQVRVRQKAGLQELPALPSL 94 (457)
T ss_dssp CSSCGGGBEEEEEEEETTEEEEEE-EET--------TSEECHHHHHHHHTCCCEECCHHHHHHHHHHHTCSSCCSCGGG
T ss_pred CCCCHHHEEEEEEEEECCCEEEEE-EEC--------CCEECHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 298961573578998789679999-738--------8725799999996888455992999988269978785977777
No 20
>3dyn_A High affinity CGMP-specific 3',5'-cyclic phosphodiesterase 9A; crystallography, phophodiestrase, enzyme mechanism, alternative splicing, hydrolase; HET: PCG IBM; 2.10A {Homo sapiens} SCOP: a.211.1.2 PDB: 3dyl_A* 3dy8_A* 3dyq_A* 3dys_A* 3jsi_A* 3jsw_A* 2yy2_A* 2hd1_A* 3k3e_A* 3k3h_A*
Probab=94.21 E-value=0.028 Score=34.94 Aligned_cols=73 Identities=23% Similarity=0.433 Sum_probs=43.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCH-----HH--HHHHHHHHHCCCCCCCCCHHHHHHHHHH-HCCC---C--CCCCC
Q ss_conf 706620888999999999998839998-----89--9999988862899886547899999973-1255---4--57765
Q gi|254780286|r 70 HYRTRLMHTIEVSQIARSLARALRIDE-----DL--VEAIALAHDFGHPPFGHVGEDVLQELLS-SYGG---F--DHNIQ 136 (410)
Q Consensus 70 ~~rtRLtHslEVa~i~rsi~~~l~~~~-----dl--vea~~L~HDiGhpPFGH~GE~al~~~~~-~~~g---F--egNaQ 136 (410)
-+|| -+|+..|+|.+-.+-...++.. ++ +=.|||+||+|||=.--.-...-+.... -|++ - -|=+.
T Consensus 73 pYHN-~~HA~dV~q~~~~ll~~~~~~~~l~~~e~~alliAAl~HDv~HpG~~N~fli~t~~~la~~Ynd~SvLEn~H~~~ 151 (329)
T 3dyn_A 73 PFHN-FRHCFCVAQMMYSMVWLCSLQEKFSQTDILILMTAAICHDLDHPGYNNTYQINARTELAVRYNDISPLENHHCAV 151 (329)
T ss_dssp SSSS-HHHHHHHHHHHHHHHHHTTHHHHSCHHHHHHHHHHHHHTTTTCCSSCHHHHHHHTCHHHHHHTTSSHHHHHHHHH
T ss_pred CCCC-HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHCCCCCHHHHHHHHH
T ss_conf 9977-899998999999999854755568989999999999980489999996899862876888749986468889999
Q ss_pred HHHHHHH
Q ss_conf 7788754
Q gi|254780286|r 137 SFRIVTE 143 (410)
Q Consensus 137 ~~Rilt~ 143 (410)
+++||.+
T Consensus 152 ~~~lL~~ 158 (329)
T 3dyn_A 152 AFQILAE 158 (329)
T ss_dssp HHHHHTS
T ss_pred HHHHHHC
T ss_conf 9999817
No 21
>3ljx_A MMOQ response regulator; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Methylococcus capsulatus} PDB: 3ljv_A
Probab=93.97 E-value=0.036 Score=34.16 Aligned_cols=84 Identities=11% Similarity=0.097 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 0888999999999998839-998899999988862899886547899999973125545776577887543211467010
Q gi|254780286|r 75 LMHTIEVSQIARSLARALR-IDEDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGGFDHNIQSFRIVTELECSYADFDG 153 (410)
Q Consensus 75 LtHslEVa~i~rsi~~~l~-~~~dlvea~~L~HDiGhpPFGH~GE~al~~~~~~~~gFegNaQ~~Rilt~LE~~~~~~~G 153 (410)
..||+.+|.+++.|++.++ .+++.+-.+||.||||-..+-...-+...++.+.- .+-.. ...|+..
T Consensus 110 w~hs~~~A~~a~~la~~~~~~~~~~a~~aGLLhdiG~l~l~~~~p~~~~~~~~~~-------~~~~~-~~~E~~~----- 176 (288)
T 3ljx_A 110 WQKSLARAVALQSITAQASTVAPKEAFTLGLLADVGRLALATAWPEEYSECLRKA-------DGEAL-IALERER----- 176 (288)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSCHHHHHHHHHHTTHHHHHHHHHCHHHHHHHHHHC-------CHHHH-HHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC-------CCCCH-HHHHHHH-----
T ss_conf 9999999999999999848999999999899987279999786769999999874-------37774-8999999-----
Q ss_pred CCHHHHHHHHHHCCCCCC
Q ss_conf 002478887763475778
Q gi|254780286|r 154 INLTWETLEGLIGHNGPI 171 (410)
Q Consensus 154 LNLT~atL~~iiKyp~~~ 171 (410)
+..|++.+++.+.-.|..
T Consensus 177 ~G~~h~~ig~~l~~~W~l 194 (288)
T 3ljx_A 177 FATDHDELTRMLLTDWGF 194 (288)
T ss_dssp HSSCHHHHHHHHHHHTTC
T ss_pred HCCCHHHHHHHHHHHCCC
T ss_conf 888999999999998597
No 22
>3kq5_A Hypothetical cytosolic protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Coxiella burnetii}
Probab=93.72 E-value=0.0048 Score=40.61 Aligned_cols=71 Identities=8% Similarity=0.001 Sum_probs=52.8
Q ss_pred CCCHHHCCCCEEECCHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC-HH----HHHHHHHHHHCCC
Q ss_conf 998434000011027346232757478716999870662088899999999999883999-88----9999998886289
Q gi|254780286|r 36 TRSEFQRDRDRMIHTTAFRRLKDKTQVFFHRQRDHYRTRLMHTIEVSQIARSLARALRID-ED----LVEAIALAHDFGH 110 (410)
Q Consensus 36 ~R~~f~rD~dRIi~S~afRRL~~KTQVf~~~~~d~~rtRLtHslEVa~i~rsi~~~l~~~-~d----lvea~~L~HDiGh 110 (410)
-++.|++. +-.+.+|+..=.|.+|..++.|.--=|-|+|||+..+-.+...-.-. .+ -|=.|||.||||.
T Consensus 43 ~~~~f~~~-----yl~pl~~~a~~vQ~lPAse~~h~GGlldh~Lev~~~alr~~~ee~~~q~~~W~~Avf~AaLlhdigk 117 (393)
T 3kq5_A 43 PTEQYAQL-----YEALVYRFVEFVQVLPIRLDEPLCSLMNEGLLRGVNSLNHYIQNHPEATPLERYALFSAGLLLEVAH 117 (393)
T ss_dssp CHHHHHHH-----THHHHHHHHHHHTTCCSSTTSCTTHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHTTTTH
T ss_pred CHHHHHHH-----HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999-----9999999999997288876788875788899999999863876555457889999999999963241
Q ss_pred C
Q ss_conf 9
Q gi|254780286|r 111 P 111 (410)
Q Consensus 111 p 111 (410)
+
T Consensus 118 ~ 118 (393)
T 3kq5_A 118 A 118 (393)
T ss_dssp H
T ss_pred C
T ss_conf 1
No 23
>1tbf_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5A, hydrolase; HET: VIA; 1.30A {Homo sapiens} SCOP: a.211.1.2 PDB: 1t9s_A* 1xoz_A* 1xp0_A* 2chm_A* 3hc8_A* 3hdz_A* 1t9r_A* 3b2r_A* 2h44_A* 2h42_A* 2h40_A* 1rkp_A* 1udt_A* 1udu_A* 1uho_A* 3jwq_A* 3jwr_A*
Probab=92.76 E-value=0.087 Score=31.32 Aligned_cols=73 Identities=22% Similarity=0.263 Sum_probs=42.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCHH-----H--HHHHHHHHHCCCCCCCCCHHHHHHHHHHH-CCC-----CCCCCC
Q ss_conf 7066208889999999999988399988-----9--99999888628998865478999999731-255-----457765
Q gi|254780286|r 70 HYRTRLMHTIEVSQIARSLARALRIDED-----L--VEAIALAHDFGHPPFGHVGEDVLQELLSS-YGG-----FDHNIQ 136 (410)
Q Consensus 70 ~~rtRLtHslEVa~i~rsi~~~l~~~~d-----l--vea~~L~HDiGhpPFGH~GE~al~~~~~~-~~g-----FegNaQ 136 (410)
-+|| -+|...|+|..-.+-+..++..- + +=.|||+||+|||-.--.=...-+..... |+. =-|=++
T Consensus 99 pYHN-~~HA~dV~q~~~~ll~~~~~~~~ls~~E~~alliAal~HDv~HpG~nN~flv~~~s~La~lYnd~SvLE~hH~~~ 177 (347)
T 1tbf_A 99 AYHN-WRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHPGVSNQFLINTNSELALMYNDESVLEHHHFDQ 177 (347)
T ss_dssp SSSS-HHHHHHHHHHHHHHHHTTCCGGGSCHHHHHHHHHHHHHTTTTCCSSCHHHHHHTTCHHHHHTTTSSHHHHHHHHH
T ss_pred CCCC-HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHCCCCCCHHHHHHH
T ss_conf 9747-999999999999999724610239999999999999861579999997899852876889719987208999999
Q ss_pred HHHHHHH
Q ss_conf 7788754
Q gi|254780286|r 137 SFRIVTE 143 (410)
Q Consensus 137 ~~Rilt~ 143 (410)
+|+|+.+
T Consensus 178 ~~~ll~~ 184 (347)
T 1tbf_A 178 CLMILNS 184 (347)
T ss_dssp HHHHHHS
T ss_pred HHHHHHC
T ss_conf 9999826
No 24
>1f0j_A PDE4B, phosphodiesterase 4B; PDE phosphodiesterase, hydrolase; 1.77A {Homo sapiens} SCOP: a.211.1.2 PDB: 1ro6_A* 1ro9_A* 1ror_A* 3hmv_A* 1tb5_A* 1xm6_A* 1xlx_A* 1xm4_A* 1xlz_A* 1xmu_A* 1xmy_A* 1xn0_A* 1xos_A* 1xot_B* 1y2h_A* 1y2j_A* 3kkt_A* 3g4i_A* 3g4k_A* 3g4l_A* ...
Probab=92.04 E-value=0.07 Score=32.00 Aligned_cols=44 Identities=25% Similarity=0.413 Sum_probs=32.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCH-----HH--HHHHHHHHHCCCCCCC
Q ss_conf 706620888999999999998839998-----89--9999988862899886
Q gi|254780286|r 70 HYRTRLMHTIEVSQIARSLARALRIDE-----DL--VEAIALAHDFGHPPFG 114 (410)
Q Consensus 70 ~~rtRLtHslEVa~i~rsi~~~l~~~~-----dl--vea~~L~HDiGhpPFG 114 (410)
-+|| -+|...|.|..-.+-...++.. ++ +=.|||+||+|||-.-
T Consensus 81 pyHN-~~HA~dV~q~~~~lL~~~~~~~~l~~~e~~alliAal~HD~~HpG~~ 131 (377)
T 1f0j_A 81 AYHN-SLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 131 (377)
T ss_dssp SSSS-HHHHHHHHHHHHHHHTCGGGTTTSCHHHHHHHHHHHHHTTTTCCSSC
T ss_pred CCCC-HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 8743-99999899999999964370000898999999999998204899888
No 25
>3bjc_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5, erectIle dysfunction, inhibitor design, allosteric enzyme, alternative splicing, CGMP binding; HET: WAN; 2.00A {Homo sapiens} SCOP: a.211.1.2 PDB: 2k31_A*
Probab=91.82 E-value=0.15 Score=29.62 Aligned_cols=20 Identities=15% Similarity=0.044 Sum_probs=9.5
Q ss_pred CHHHHHHHHHHHHCCCCCCC
Q ss_conf 36999999999818898855
Q gi|254780286|r 384 TDSYAIREHHILFGYIPDFA 403 (410)
Q Consensus 384 TD~YAi~ly~kL~G~~p~~~ 403 (410)
-|..++-+|+.|....|++.
T Consensus 824 ~~~~~~Pl~~~l~~~~p~~~ 843 (878)
T 3bjc_A 824 IDAICLQLYEALTHVSEDCF 843 (878)
T ss_dssp HHHTHHHHHHHHHHHCGGGH
T ss_pred HHHHHHHHHHHHHHHCHHHH
T ss_conf 99999999999999786489
No 26
>3itu_A CGMP-dependent 3',5'-cyclic phosphodiesterase; Zn-binding, all-alpha-helical, alternative splicing, hydrolase, membrane, polymorphism; HET: IBM; 1.58A {Homo sapiens} PDB: 3itm_A* 1z1l_A
Probab=91.78 E-value=0.1 Score=30.87 Aligned_cols=44 Identities=23% Similarity=0.452 Sum_probs=32.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCC----CH-HH--HHHHHHHHHCCCCCCC
Q ss_conf 7066208889999999999988399----98-89--9999988862899886
Q gi|254780286|r 70 HYRTRLMHTIEVSQIARSLARALRI----DE-DL--VEAIALAHDFGHPPFG 114 (410)
Q Consensus 70 ~~rtRLtHslEVa~i~rsi~~~l~~----~~-dl--vea~~L~HDiGhpPFG 114 (410)
-+|| -+|+..|.|..-.+-+..++ ++ ++ +=.|||+||+|||-.-
T Consensus 80 pyHN-~~HA~dV~q~~~~ll~~~~~~~~l~~~e~~alliAal~HDv~HpG~~ 130 (345)
T 3itu_A 80 PYHN-WMHAFSVSHFCYLLYKNLELTNYLEDIEIFALFISCMCHDLDHRGTN 130 (345)
T ss_dssp SSSS-HHHHHHHHHHHHHHHHHHCGGGTSCHHHHHHHHHHHHHTTTTCCSCC
T ss_pred CCCC-HHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 8845-88899999999999972370012898999999999997256899999
No 27
>3ibj_A CGMP-dependent 3',5'-cyclic phosphodiesterase; PDE2A, GAF-domains, allosteric regulation hydrolase, membrane; 3.02A {Homo sapiens}
Probab=91.58 E-value=0.13 Score=29.98 Aligned_cols=24 Identities=17% Similarity=0.148 Sum_probs=16.1
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 733699999999981889885555
Q gi|254780286|r 382 GMTDSYAIREHHILFGYIPDFAVD 405 (410)
Q Consensus 382 GMTD~YAi~ly~kL~G~~p~~~~~ 405 (410)
|.-+..++-+|+.|....|++...
T Consensus 648 ~Fi~~~~~Pl~~~l~~~~p~~~~~ 671 (691)
T 3ibj_A 648 SFMEHIAMPIYKLLQDLFPKAAEL 671 (691)
T ss_dssp HHHHHTHHHHHHHHTTTCGGGHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 999999999999999978036999
No 28
>3hr1_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphodiesterase 10A; PDE 10A, PDE10 inhibitors, allosteric enzyme, alternative splicing; HET: PF9; 1.53A {Rattus norvegicus} PDB: 3hqy_A* 3hqz_A* 3hqw_A*
Probab=91.47 E-value=0.17 Score=29.11 Aligned_cols=47 Identities=17% Similarity=0.330 Sum_probs=31.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCC--CCH-HH--HHHHHHHHHCCCCCCCCCHH
Q ss_conf 8706620888999999999998839--998-89--99999888628998865478
Q gi|254780286|r 69 DHYRTRLMHTIEVSQIARSLARALR--IDE-DL--VEAIALAHDFGHPPFGHVGE 118 (410)
Q Consensus 69 d~~rtRLtHslEVa~i~rsi~~~l~--~~~-dl--vea~~L~HDiGhpPFGH~GE 118 (410)
-=+|| -.|...|+|..-.+-...+ +++ ++ +=.|||+||+||| |...-
T Consensus 108 nPYHN-~~HA~dV~q~~~~lL~~~~~~lt~lE~~alliAALcHDv~Hp--G~~N~ 159 (380)
T 3hr1_A 108 VPYHN-WKHAVTVAHCMYAILQNNNGLFTDLERKGLLIACLCHDLDHR--GFSNS 159 (380)
T ss_dssp CSSSS-HHHHHHHHHHHHHHHHTSTTTSCHHHHHHHHHHHHHTTTTCC--SCCHH
T ss_pred CCCCC-HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC--CCCCH
T ss_conf 99817-899999999999999437656898999999999996027999--98968
No 29
>2r8q_A Class I phosphodiesterase PDEB1; leishimaniasis, parasite inhibitor selectivity, CAMP phosphodiesterase, hydrolase; HET: IBM; 1.50A {Leishmania major}
Probab=91.26 E-value=0.13 Score=30.10 Aligned_cols=72 Identities=24% Similarity=0.339 Sum_probs=44.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCH-----HH--HHHHHHHHHCCCCCCCCCHHHHHH------HHHHHCCC---C-
Q ss_conf 8706620888999999999998839998-----89--999998886289988654789999------99731255---4-
Q gi|254780286|r 69 DHYRTRLMHTIEVSQIARSLARALRIDE-----DL--VEAIALAHDFGHPPFGHVGEDVLQ------ELLSSYGG---F- 131 (410)
Q Consensus 69 d~~rtRLtHslEVa~i~rsi~~~l~~~~-----dl--vea~~L~HDiGhpPFGH~GE~al~------~~~~~~~g---F- 131 (410)
--+|| -.|...|.|..-.+-...++.. ++ +=.|||+||+||| |....--++ .....++. -
T Consensus 97 nPYHN-~~HA~dV~q~~~~lL~~~~~~~~l~~~e~~alliAAl~HDv~Hp--G~nN~fli~~~~~LA~lY~~~nD~SvLE 173 (359)
T 2r8q_A 97 VPYHN-FYHVVDVCQTLHTYLYTGKASELLTELECYVLLVTALVHDLDHM--GVNNSFYLKTDSPLGILSSASGNNSVLE 173 (359)
T ss_dssp CSSSS-HHHHHHHHHHHHHHHHTSCGGGGSCHHHHHHHHHHHHHTTTTCC--SCCHHHHHHTTCHHHHHHHHHSCCCHHH
T ss_pred CCCCC-HHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCCCC--CCCHHHHHHCCCHHHHHHCCCCCCCHHH
T ss_conf 99827-89999999999999972653210898999999999997257999--9981899971889998740347886779
Q ss_pred -CCCCCHHHHHHH
Q ss_conf -577657788754
Q gi|254780286|r 132 -DHNIQSFRIVTE 143 (410)
Q Consensus 132 -egNaQ~~Rilt~ 143 (410)
-|-+.+|+||.+
T Consensus 174 nhH~~~~~~lL~~ 186 (359)
T 2r8q_A 174 VHHCSLAIEILSD 186 (359)
T ss_dssp HHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHCC
T ss_conf 9999999999847
No 30
>3ecm_A High affinity CAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A...; phosphodiesterase 8A PDE8A inhibitor selectivity; 1.90A {Homo sapiens} PDB: 3ecn_A*
Probab=91.16 E-value=0.047 Score=33.31 Aligned_cols=71 Identities=24% Similarity=0.341 Sum_probs=40.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCC----CCH-HH--HHHHHHHHHCCCCCCCCCHHHHHHH---HHHHCCC-----CCCC
Q ss_conf 706620888999999999998839----998-89--9999988862899886547899999---9731255-----4577
Q gi|254780286|r 70 HYRTRLMHTIEVSQIARSLARALR----IDE-DL--VEAIALAHDFGHPPFGHVGEDVLQE---LLSSYGG-----FDHN 134 (410)
Q Consensus 70 ~~rtRLtHslEVa~i~rsi~~~l~----~~~-dl--vea~~L~HDiGhpPFGH~GE~al~~---~~~~~~g-----FegN 134 (410)
=+|| .+|+..|.|..-.+-...+ +++ +. +=.|||+||+||| |....--++. ...-|++ =-|-
T Consensus 73 pYHN-~~HA~dV~q~~~~lL~~~~~~~~l~~~e~~alliAal~HDv~Hp--G~~N~fl~~~~~~la~~y~d~SvLE~~H~ 149 (338)
T 3ecm_A 73 PYHN-STHSADVLHATAYFLSKERIKETLDPIDEVAALIAATIHDVDHP--GRTNSFLCNAGSELAILYNDTAVLESHHA 149 (338)
T ss_dssp SSSS-HHHHHHHHHHHHHHHTSHHHHTTSCHHHHHHHHHHHHHTTTTCC--SSCHHHHHHTTCHHHHHTTTSSHHHHHHH
T ss_pred CCCC-HHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHCCCCCC--CCCCHHHHHCCCHHHHHCCCCCHHHHHHH
T ss_conf 8755-99999999999999970332001998999999999998147999--98768888808838988099975377899
Q ss_pred CCHHHHHHH
Q ss_conf 657788754
Q gi|254780286|r 135 IQSFRIVTE 143 (410)
Q Consensus 135 aQ~~Rilt~ 143 (410)
+.++++|.+
T Consensus 150 ~~~~~ll~~ 158 (338)
T 3ecm_A 150 ALAFQLTTG 158 (338)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHCC
T ss_conf 999999745
No 31
>1y2k_A DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodiesterase 4D; PDE4D, pyrazole, hydrolase; HET: 7DE; 1.36A {Homo sapiens} SCOP: a.211.1.2 PDB: 1xon_A* 1xoq_A* 1xom_A* 1xor_A* 1y2c_A* 1y2d_A* 1y2e_A* 1y2b_A* 3iak_A* 3k4s_A* 1tbb_A* 1tb7_A* 2fm0_A* 2fm5_A* 1oyn_A* 1ptw_A* 1q9m_A* 1zkn_A* 2qyn_A* 2pw3_A* ...
Probab=91.07 E-value=0.1 Score=30.75 Aligned_cols=45 Identities=20% Similarity=0.364 Sum_probs=32.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCH-----HH--HHHHHHHHHCCCCCCCC
Q ss_conf 706620888999999999998839998-----89--99999888628998865
Q gi|254780286|r 70 HYRTRLMHTIEVSQIARSLARALRIDE-----DL--VEAIALAHDFGHPPFGH 115 (410)
Q Consensus 70 ~~rtRLtHslEVa~i~rsi~~~l~~~~-----dl--vea~~L~HDiGhpPFGH 115 (410)
=+|| -+|...|.|..-.+-+..++.+ ++ +=.|||+||+|||..--
T Consensus 94 pYHN-~~HA~dV~q~~~~lL~~~~l~~~l~~~e~~alliAAl~HDv~HpG~~N 145 (349)
T 1y2k_A 94 AYHN-NIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVSN 145 (349)
T ss_dssp SSSS-HHHHHHHHHHHHHHHTCGGGTTTSCHHHHHHHHHHHHHTTTTCCSSCH
T ss_pred CCCC-HHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 8725-999999999999999753722108988999999999982269999995
No 32
>1zkl_A HCP1, TM22, high-affinity CAMP-specific 3',5'-cyclic phosphodiesterase 7A; PDE, hydrolase; HET: IBM; 1.67A {Homo sapiens} PDB: 3g3n_A*
Probab=90.78 E-value=0.051 Score=32.99 Aligned_cols=70 Identities=17% Similarity=0.289 Sum_probs=40.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCC----CCH-HH--HHHHHHHHHCCCCCCCCCHHHHHH--HH-HHHCCC-----CCCC
Q ss_conf 706620888999999999998839----998-89--999998886289988654789999--99-731255-----4577
Q gi|254780286|r 70 HYRTRLMHTIEVSQIARSLARALR----IDE-DL--VEAIALAHDFGHPPFGHVGEDVLQ--EL-LSSYGG-----FDHN 134 (410)
Q Consensus 70 ~~rtRLtHslEVa~i~rsi~~~l~----~~~-dl--vea~~L~HDiGhpPFGH~GE~al~--~~-~~~~~g-----FegN 134 (410)
-+|| -+|...|+|..-.+-+..+ +++ ++ +=.|||+||+|||- ....--++ .. ..-|++ =-|-
T Consensus 81 PYHN-~~HA~dV~q~~~~ll~~~~l~~~l~~~e~~alliAal~HDv~HpG--~~N~fl~~t~s~lA~~Ynd~SvLEn~H~ 157 (353)
T 1zkl_A 81 PYHN-AVHAADVTQAMHCYLKEPKLANSVTPWDILLSLIAAATHDLDHPG--VNQPFLIKTNHYLATLYKNTSVLENHHW 157 (353)
T ss_dssp SSSS-HHHHHHHHHHHHHHHTSHHHHTTCCHHHHHHHHHHHHHTTTTCCS--SCHHHHHHTTCHHHHHTTTSSHHHHHHH
T ss_pred CCCC-HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC--CCCHHHHHCCCHHHHHCCCCCHHHHHHH
T ss_conf 8752-999999999999999501143108999999999999973268999--9858998728878887199638789999
Q ss_pred CCHHHHHH
Q ss_conf 65778875
Q gi|254780286|r 135 IQSFRIVT 142 (410)
Q Consensus 135 aQ~~Rilt 142 (410)
+.+|+||.
T Consensus 158 ~~~~~lL~ 165 (353)
T 1zkl_A 158 RSAVGLLR 165 (353)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999986
No 33
>1taz_A Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B; PDE1B, hydrolase; HET: CME; 1.77A {Homo sapiens} SCOP: a.211.1.2
Probab=90.43 E-value=0.19 Score=28.73 Aligned_cols=151 Identities=18% Similarity=0.111 Sum_probs=69.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCC----H-HH--HHHHHHHHHCCCCCCCCCHHHHHHHHHH-HCCC-----CCCCCC
Q ss_conf 70662088899999999999883999----8-89--9999988862899886547899999973-1255-----457765
Q gi|254780286|r 70 HYRTRLMHTIEVSQIARSLARALRID----E-DL--VEAIALAHDFGHPPFGHVGEDVLQELLS-SYGG-----FDHNIQ 136 (410)
Q Consensus 70 ~~rtRLtHslEVa~i~rsi~~~l~~~----~-dl--vea~~L~HDiGhpPFGH~GE~al~~~~~-~~~g-----FegNaQ 136 (410)
=+|| -+|...|.|-.-.+-...++. + ++ +=.|||+||+|||-+--.-.-.-+.... -|+. =-|=+.
T Consensus 80 PYHN-~~HA~dV~q~~~~~l~~~~~~~~l~~~e~~alliAAl~HD~~HpG~~N~fli~t~~~LA~~Ynd~SvLEnhH~~~ 158 (365)
T 1taz_A 80 PYHN-QIHAADVTQTVHCFLLRTGMVHCLSEIELLAIIFAAAIHDYEHTGTTNSFHIQTKSECAIVYNDRSVLENHHISS 158 (365)
T ss_dssp SSSS-HHHHHHHHHHHHHHHHHHSGGGGSCHHHHHHHHHHHHHTTTTCCSSCHHHHHHHTCHHHHHHTTSSHHHHHHHHH
T ss_pred CCCC-HHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHCCCCCHHHHHHHHH
T ss_conf 7535-999999999999999713332018999999999999981358999985588636877888649987778999999
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC-CCCCCCCCCCCCCHHHHHHHHHHHCC-CCCCCCCHHHHHHHHHHHH
Q ss_conf 778875432114670100024788877634757-78864445521001457766764022-3133667321798656554
Q gi|254780286|r 137 SFRIVTELECSYADFDGINLTWETLEGLIGHNG-PILPQDLDKPRIIPRIFSDYYHIHGL-SLANFASLEGQVAAIADDI 214 (410)
Q Consensus 137 ~~Rilt~LE~~~~~~~GLNLT~atL~~iiKyp~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~slEa~iveaADDI 214 (410)
+|+|+.+-+. .-+ .||+.+...-+.|.=. .+.+.+..+. .+....+...... .......+-.-+|-+| ||
T Consensus 159 ~~~lL~~~~~--ni~--~~l~~~~~~~~r~~ii~~ILaTDms~H---~~~~~~~~~~~~~~~~~~~~~ll~~li~~A-Di 230 (365)
T 1taz_A 159 VFRLMQDDEM--NIF--INLTKDEFVELRALVIEMVLATDMSCH---FQQVKTMKTALQQLERIDKPKALSLLLHAA-DI 230 (365)
T ss_dssp HHHHTTSGGG--CTT--TTSCHHHHHHHHHHHHHHHHTTCGGGH---HHHHHHHHHHHHC--CCCHHHHHHHHHHHH-HT
T ss_pred HHHHHHCCCC--CCC--CCCCHHHHHHHHHHHHHHHHCCCHHHH---HHHHHHHHHHHHHCCCCCHHHHHHHHHHHH-CC
T ss_conf 9999816133--411--289999999999999999732657879---999999999987421024999999999861-04
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 432120798998753
Q gi|254780286|r 215 AYDAHDIDDGVRAGL 229 (410)
Q Consensus 215 AY~~hDlEDai~~gl 229 (410)
+..+...+-+.+-..
T Consensus 231 s~~~rp~~~~~~W~~ 245 (365)
T 1taz_A 231 SHPTKQWLVHSRWTK 245 (365)
T ss_dssp CGGGSCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH
T ss_conf 442377799999999
No 34
>3g4g_A DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodiesterase 4D; PDE4D, UCR2, alternative splicing, cytoplasm, cytoskeleton, hydrolase, membrane; HET: D71; 2.30A {Homo sapiens} PDB: 3g45_A*
Probab=90.20 E-value=0.15 Score=29.47 Aligned_cols=42 Identities=21% Similarity=0.409 Sum_probs=18.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCH-----HH--HHHHHHHHHCCCCCC
Q ss_conf 06620888999999999998839998-----89--999998886289988
Q gi|254780286|r 71 YRTRLMHTIEVSQIARSLARALRIDE-----DL--VEAIALAHDFGHPPF 113 (410)
Q Consensus 71 ~rtRLtHslEVa~i~rsi~~~l~~~~-----dl--vea~~L~HDiGhpPF 113 (410)
+||- +|...|.|..-.+-...++.. ++ +=.|||.||+|||..
T Consensus 161 YHN~-~HA~DV~q~~~~lL~~~~l~~~lt~lE~~alliAAl~HDv~HpG~ 209 (421)
T 3g4g_A 161 YHNN-IHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGV 209 (421)
T ss_dssp SSSH-HHHHHHHHHHHHHHTCGGGTTTSCHHHHHHHHHHHHHTTTTCCSS
T ss_pred CCCH-HHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 7559-999999999999996526332189899999999999813799998
No 35
>2cqz_A 177AA long hypothetical protein; hypothetical proteins, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.60A {Pyrococcus horikoshii OT3}
Probab=90.05 E-value=0.36 Score=26.72 Aligned_cols=37 Identities=32% Similarity=0.416 Sum_probs=30.9
Q ss_pred CCHHHHHHHHHHHHHHHHHC-----CCCHHHHHHHHHHHHCC
Q ss_conf 62088899999999999883-----99988999999888628
Q gi|254780286|r 73 TRLMHTIEVSQIARSLARAL-----RIDEDLVEAIALAHDFG 109 (410)
Q Consensus 73 tRLtHslEVa~i~rsi~~~l-----~~~~dlvea~~L~HDiG 109 (410)
|=-.||..||-||--+|..+ ++|.+=|-..||.||++
T Consensus 32 sVAeHs~~vA~ia~~la~~~~~~~~~vd~~k~~~maL~HDl~ 73 (177)
T 2cqz_A 32 SIADHSFGVAFITLVLADVLEKRGKRIDVEKALKMAIVHDLA 73 (177)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTTTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 499999999999999998987735676999999999983489
No 36
>1xx7_A Oxetanocin-like protein; PSI, secsg, protein structure initiative, southeast collaboratory for structural genomics; 2.26A {Pyrococcus furiosus} SCOP: a.211.1.1
Probab=89.68 E-value=0.4 Score=26.37 Aligned_cols=37 Identities=35% Similarity=0.433 Sum_probs=31.6
Q ss_pred CCHHHHHHHHHHHHHHHHHC-----CCCHHHHHHHHHHHHCC
Q ss_conf 62088899999999999883-----99988999999888628
Q gi|254780286|r 73 TRLMHTIEVSQIARSLARAL-----RIDEDLVEAIALAHDFG 109 (410)
Q Consensus 73 tRLtHslEVa~i~rsi~~~l-----~~~~dlvea~~L~HDiG 109 (410)
|=-.||..||-+|--|+..+ ++|.+-|-..||.||++
T Consensus 37 sVAeHs~~vA~ia~~la~~~~~~g~~vd~~k~~~maL~HDl~ 78 (184)
T 1xx7_A 37 SVADHSYRVAFITLLLAEELKKKGVEIDVEKALKIAIIHDLG 78 (184)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTTTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 599999999999999999986545576999999999998649
No 37
>2our_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphodiesterase 10A; PDE10, substrate specificity, hydrolase; HET: CMP; 1.45A {Homo sapiens} PDB: 2ous_A 2ouu_A* 2wey_A* 2oun_A* 2oup_A 2ouq_A* 2ouv_A 2ouy_A* 2o8h_A* 2ovv_A* 2ovy_A* 3lxg_A*
Probab=89.41 E-value=0.19 Score=28.72 Aligned_cols=51 Identities=18% Similarity=0.298 Sum_probs=32.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCC--CCH-HH--HHHHHHHHHCCCCCCCCCHHH
Q ss_conf 98706620888999999999998839--998-89--999998886289988654789
Q gi|254780286|r 68 RDHYRTRLMHTIEVSQIARSLARALR--IDE-DL--VEAIALAHDFGHPPFGHVGED 119 (410)
Q Consensus 68 ~d~~rtRLtHslEVa~i~rsi~~~l~--~~~-dl--vea~~L~HDiGhpPFGH~GE~ 119 (410)
+--+|| -.|...|+|..-.+-...+ +++ ++ +=.|||+||+|||=+--.-..
T Consensus 76 ~~pYHN-~~HA~dV~q~~~~~L~~~~~~l~~~e~~alliAal~HDv~H~G~~N~fl~ 131 (331)
T 2our_A 76 RVPYHN-WKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHDLDHRGFSNSYLQ 131 (331)
T ss_dssp SCSSSS-HHHHHHHHHHHHHHHHTTGGGSCHHHHHHHHHHHHHTTTTCCSCCHHHHH
T ss_pred CCCCCC-HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH
T ss_conf 999807-89999999999999837775799899999999999843699999988888
No 38
>3mzo_A LIN2634 protein; HD-domain phosphohydrolase, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.98A {Listeria innocua}
Probab=89.20 E-value=0.53 Score=25.49 Aligned_cols=42 Identities=19% Similarity=0.253 Sum_probs=32.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHH-----CCCCHHHHHHHHHHHHCC
Q ss_conf 987066208889999999999988-----399988999999888628
Q gi|254780286|r 68 RDHYRTRLMHTIEVSQIARSLARA-----LRIDEDLVEAIALAHDFG 109 (410)
Q Consensus 68 ~d~~rtRLtHslEVa~i~rsi~~~-----l~~~~dlvea~~L~HDiG 109 (410)
|-.-.|=..||+.||.||-.||.. -++|.+=+-..||-||++
T Consensus 25 ~~~~EsVAeHS~~VA~iA~~La~i~~~~~~~vd~~k~~~~AL~HD~~ 71 (216)
T 3mzo_A 25 KYQEHSVAEHSYKVTSIAQFFGAVEEDAGNEVNWRALYEKALNHDYS 71 (216)
T ss_dssp CSSCCBHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTTGG
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 99966299999999999999998887526788999999999973028
No 39
>3i7a_A Putative metal-dependent phosphohydrolase; YP_926882.1, structural genomics, joint center for structural genomics, JCSG; 2.06A {Shewanella amazonensis SB2B}
Probab=88.22 E-value=1.3 Score=22.65 Aligned_cols=114 Identities=12% Similarity=0.055 Sum_probs=61.4
Q ss_pred CHHHHHHHHHHHHHHHHHC-------CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 2088899999999999883-------999889999998886289988654789999997312554577657788754321
Q gi|254780286|r 74 RLMHTIEVSQIARSLARAL-------RIDEDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGGFDHNIQSFRIVTELEC 146 (410)
Q Consensus 74 RLtHslEVa~i~rsi~~~l-------~~~~dlvea~~L~HDiGhpPFGH~GE~al~~~~~~~~gFegNaQ~~Rilt~LE~ 146 (410)
-..||+.||.+++.+++.+ +.+.|.+-.+||.||||-.+ +...+.++. +.+.-... |.
T Consensus 118 ~w~~s~~~a~~a~~la~~~~~~~~~~~~~~~~a~~aGLlhdiG~l~--------l~~~~~~~~------~~~~~~~~-e~ 182 (281)
T 3i7a_A 118 VWRTSIDVTAAACSLLQIYNKKHPGSGLNYDTLTLAGLVHNIGALP--------VLTEAEAHP------EMFTTIEH-LR 182 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTCCCCHHHHHHHHHHTTTTHHH--------HHHHHHHCG------GGCCCHHH-HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH--------HHHHHHHHH------HHCCHHHH-HH
T ss_conf 9999999999999999997220454323289999988775301888--------988868777------65454899-99
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH-HHCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 146701000247888776347577886444552100145776676-402231336673217986565544321
Q gi|254780286|r 147 SYADFDGINLTWETLEGLIGHNGPILPQDLDKPRIIPRIFSDYYH-IHGLSLANFASLEGQVAAIADDIAYDA 218 (410)
Q Consensus 147 ~~~~~~GLNLT~atL~~iiKyp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~slEa~iveaADDIAY~~ 218 (410)
.-+.-+.+.+++.+.-.|...+. +.+... -............+.++.+|+.+|-..
T Consensus 183 -----~~~g~~h~~ig~~l~~~W~lp~~-----------i~~~i~~hh~~~~~~~~~~l~~iv~lA~~~~~~~ 239 (281)
T 3i7a_A 183 -----SLVRKMQGPIGRAVLKSWDFAPE-----------VMEVVERWADLPYLGDHVSYLDFIRAAAFYTGEL 239 (281)
T ss_dssp -----HHHHHHHHHHHHHHHHHTTCCHH-----------HHHHHHHTTCTTCCCSSCCHHHHHHHHHHHHTSS
T ss_pred -----HHHCCCHHHHHHHHHHHCCCCHH-----------HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf -----99743478899999997598999-----------9999998748443676425999999999998662
No 40
>2paq_A 5'-deoxynucleotidase YFBR; HD domain phosphohydrolase, structural genomics, PSI, protein structure initiative; 2.10A {Escherichia coli K12} SCOP: a.211.1.1 PDB: 2par_A* 2pau_A*
Probab=87.95 E-value=0.51 Score=25.61 Aligned_cols=38 Identities=21% Similarity=0.358 Sum_probs=31.6
Q ss_pred CCCHHHHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHCC
Q ss_conf 66208889999999999988------399988999999888628
Q gi|254780286|r 72 RTRLMHTIEVSQIARSLARA------LRIDEDLVEAIALAHDFG 109 (410)
Q Consensus 72 rtRLtHslEVa~i~rsi~~~------l~~~~dlvea~~L~HDiG 109 (410)
-|=-.||..||.+|--|+.. .++|.+-|-..||.||++
T Consensus 30 EsVAeHs~~va~ia~~la~~~~~~~~~~vd~~k~~~maL~HDl~ 73 (201)
T 2paq_A 30 ENVSEHSLQVAMVAHALAAIKNRKFGGNVNAERIALLAMYHDAS 73 (201)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHTTTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 66999999999999999988887536788999999999971169
No 41
>3kh1_A Predicted metal-dependent phosphohydrolase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.37A {Magnetospirillum magnetotacticum ms-1}
Probab=86.67 E-value=0.53 Score=25.53 Aligned_cols=37 Identities=22% Similarity=0.223 Sum_probs=32.0
Q ss_pred CCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHCC
Q ss_conf 62088899999999999883--99988999999888628
Q gi|254780286|r 73 TRLMHTIEVSQIARSLARAL--RIDEDLVEAIALAHDFG 109 (410)
Q Consensus 73 tRLtHslEVa~i~rsi~~~l--~~~~dlvea~~L~HDiG 109 (410)
|=-.||..||-+|-.++... ++|.+=|-..||.||++
T Consensus 40 svAeHS~~~a~~a~~la~~~~~~vd~~k~~~maL~HDl~ 78 (200)
T 3kh1_A 40 NDAEHSWHIATMAFLLAEYADEAVQIGRVARMLLIHDIV 78 (200)
T ss_dssp EHHHHHHHHHHHHHHTGGGSCTTCCHHHHHHHHHHTTTT
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 699999999999999887726778999999999996799
No 42
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=84.93 E-value=0.6 Score=25.12 Aligned_cols=22 Identities=32% Similarity=0.483 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 6554432120798998753067
Q gi|254780286|r 211 ADDIAYDAHDIDDGVRAGLLTV 232 (410)
Q Consensus 211 ADDIAY~~hDlEDai~~gli~~ 232 (410)
++.|-.+...|=||+-..++.-
T Consensus 289 ~~~i~vs~~gLReGll~~~l~~ 310 (508)
T 3hi0_A 289 PAKIAFSAQGVREGYLYSLLTE 310 (508)
T ss_dssp CSEEEECSCCHHHHHHHTTSCH
T ss_pred CCEEEECCCCHHHHHHHHHHHH
T ss_conf 9989988985889999998644
No 43
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, actin) superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=82.61 E-value=1.4 Score=22.38 Aligned_cols=20 Identities=10% Similarity=0.207 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHHHHC
Q ss_conf 65544321207989987530
Q gi|254780286|r 211 ADDIAYDAHDIDDGVRAGLL 230 (410)
Q Consensus 211 ADDIAY~~hDlEDai~~gli 230 (410)
++.|-.+...|=||+-..++
T Consensus 287 ~~~i~vs~~glREGll~~~~ 306 (513)
T 1u6z_A 287 IRELRLSDGALREGVLYEME 306 (513)
T ss_dssp CSCBEECSCCHHHHHHHHHH
T ss_pred CCEEEECCCCHHHHHHHHHH
T ss_conf 99899899827899999977
No 44
>1ynb_A Hypothetical protein AF1432; structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 1.76A {Archaeoglobus fulgidus dsm 4304} SCOP: a.211.1.1 PDB: 1yoy_A
Probab=81.33 E-value=2.1 Score=21.10 Aligned_cols=38 Identities=24% Similarity=0.147 Sum_probs=29.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCH-HH--HHHHHHHHHCC
Q ss_conf 6620888999999999998839998-89--99999888628
Q gi|254780286|r 72 RTRLMHTIEVSQIARSLARALRIDE-DL--VEAIALAHDFG 109 (410)
Q Consensus 72 rtRLtHslEVa~i~rsi~~~l~~~~-dl--vea~~L~HDiG 109 (410)
-|=-.||.-||-+|-.|+...+.+. |+ |=..||.||++
T Consensus 37 EsVAeHs~r~A~ia~~la~~~~~~~~d~~k~~~maL~HDl~ 77 (173)
T 1ynb_A 37 ESVAEHNFRAAIIAFILALKSGESVEKACKAATAALFHDLH 77 (173)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTTT
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 76899999999999998877388500299999999998989
No 45
>1so2_A CGMP-inhibited 3',5'-cyclic phosphodiesterase B; PDE3B phosphodiesterase, hydrolase; HET: HG9 666; 2.40A {Homo sapiens} SCOP: a.211.1.2 PDB: 1soj_A*
Probab=80.82 E-value=0.39 Score=26.47 Aligned_cols=21 Identities=19% Similarity=0.251 Sum_probs=16.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8706620888999999999998
Q gi|254780286|r 69 DHYRTRLMHTIEVSQIARSLAR 90 (410)
Q Consensus 69 d~~rtRLtHslEVa~i~rsi~~ 90 (410)
--+|| -.|...|.|-.-.|-.
T Consensus 81 nPYHN-~~HA~dV~q~~~~lL~ 101 (420)
T 1so2_A 81 IPYHN-RIHATDVLHAVWYLTT 101 (420)
T ss_dssp CSSSS-HHHHHHHHHHHHHHTT
T ss_pred CCCCC-HHHHHHHHHHHHHHHH
T ss_conf 99817-8899999999999995
No 46
>1vj7_A Bifunctional RELA/SPOT; HD domain, alpha beta 2-layer sandwich, helix bundle, manganese, GDP, PPG2':3'P, (P)PPGPP, PPGPP; HET: GDP GPX; 2.10A {Streptococcus dysgalactiae subsp} SCOP: a.211.1.1 d.218.1.8
Probab=79.66 E-value=1.6 Score=22.02 Aligned_cols=57 Identities=25% Similarity=0.240 Sum_probs=38.5
Q ss_pred CCCEEECCHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
Q ss_conf 0001102734623275747871699987066208889999999999988399988999999888628
Q gi|254780286|r 43 DRDRMIHTTAFRRLKDKTQVFFHRQRDHYRTRLMHTIEVSQIARSLARALRIDEDLVEAIALAHDFG 109 (410)
Q Consensus 43 D~dRIi~S~afRRL~~KTQVf~~~~~d~~rtRLtHslEVa~i~rsi~~~l~~~~dlvea~~L~HDiG 109 (410)
|.+.|--.-.|-+-.+.-|+-..++ .+ .+|.++||.+= + .++++++.+ +|||.||.=
T Consensus 24 d~~~i~kA~~fA~~~H~gQ~RksGe-py----i~Hp~~VA~iL---a-~l~~D~~ti-~AaLLHDvv 80 (393)
T 1vj7_A 24 DAAFVKKALDYATAAHFYQVRKSGE-PY----IVHPIQVAGIL---A-DLHLDAVTV-ACGFLHDVV 80 (393)
T ss_dssp HHHHHHHHHHHHHHHTTTCBCTTSC-BT----THHHHHHHHHH---H-HTTCCHHHH-HHHHHTTHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCC-CH----HHHHHHHHHHH---H-HHCCCHHHH-HHHHHHCHH
T ss_conf 8999999999999996789489998-38----99999999999---8-849999999-999822438
No 47
>3m5f_A Metal dependent phosphohydrolase; CAS3, prokaryotic immune system, HD-motif, structural genomics, PSI-2; 2.30A {Methanocaldococcus jannaschii}
Probab=77.11 E-value=3 Score=19.92 Aligned_cols=90 Identities=16% Similarity=0.269 Sum_probs=44.2
Q ss_pred CCHHHHHHHHHHHHHHHHH-------------CCCCH----HHHHHHHHHHHCCC--CCCCCCHHHHHHHHHHH---CCC
Q ss_conf 6208889999999999988-------------39998----89999998886289--98865478999999731---255
Q gi|254780286|r 73 TRLMHTIEVSQIARSLARA-------------LRIDE----DLVEAIALAHDFGH--PPFGHVGEDVLQELLSS---YGG 130 (410)
Q Consensus 73 tRLtHslEVa~i~rsi~~~-------------l~~~~----dlvea~~L~HDiGh--pPFGH~GE~al~~~~~~---~~g 130 (410)
|=..|+..|+.+...|... ++++. +++.-+|+-||||= |-|- +....+ ...
T Consensus 16 tL~eH~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~HD~GK~~~~FQ-------~~~~~~~~~~~~ 88 (244)
T 3m5f_A 16 SLIDHVNDMVKYWERIKYRYLKTIKRALEALNIKLDIEKVDEFMKILIKLHDIGKASKIYQ-------RAIINDQEKLMG 88 (244)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCCCHHHHHHHHHHHHHHTTGGGGBHHHH-------HHHHCTTSCCSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHH-------HHHHCCCCCCCC
T ss_conf 5999999999999999998769999999986026888999999999999811100249999-------988526777878
Q ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 45776577887543211467010002478887763475778
Q gi|254780286|r 131 FDHNIQSFRIVTELECSYADFDGINLTWETLEGLIGHNGPI 171 (410)
Q Consensus 131 FegNaQ~~Rilt~LE~~~~~~~GLNLT~atL~~iiKyp~~~ 171 (410)
..|+.-|--++..+-.+..... .+-..+.-+|+.|-++.
T Consensus 89 ~~H~~~s~~~~~~~~~~~~~~~--~~~~~~~~~v~~HH~~l 127 (244)
T 3m5f_A 89 FRHELVSAYYTYHILLKKFGDK--NLAFIGALTVMLHHEPI 127 (244)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCH--HHHHHHHHHHHTTTSCC
T ss_pred CCHHHHHHHHHHHHHHHCCCCH--HHHHHHHHHHHHCCCCC
T ss_conf 9869999999999988622257--89999999998668762
No 48
>1vqr_A Hypothetical protein CJ0248; 6967725, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.25A {Campylobacter jejuni subsp} SCOP: a.211.1.3
Probab=70.83 E-value=1.9 Score=21.36 Aligned_cols=42 Identities=12% Similarity=-0.009 Sum_probs=29.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHCCCCC
Q ss_conf 0662088899999999999883-99988999999888628998
Q gi|254780286|r 71 YRTRLMHTIEVSQIARSLARAL-RIDEDLVEAIALAHDFGHPP 112 (410)
Q Consensus 71 ~rtRLtHslEVa~i~rsi~~~l-~~~~dlvea~~L~HDiGhpP 112 (410)
...-..||..+|..++.++... +.+++.+-++||.||||-..
T Consensus 122 ~~~~w~~s~~~a~~~~~~~~~~~~~~~~~a~~aGLLhdiG~l~ 164 (297)
T 1vqr_A 122 TQNFLKTCNEEATFIANWLNDEDKKLSHLLVPCAMLLRLGIVI 164 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHH
T ss_conf 9999999999999999998761554799999978887504999
No 49
>3nr1_A HD domain-containing protein 3; stringent response, pyrophosphohydrolase, HD (histidine and acid) family, PPGPP hydrolase, hydrolase; 1.90A {Homo sapiens}
Probab=68.34 E-value=3.6 Score=19.35 Aligned_cols=56 Identities=25% Similarity=0.248 Sum_probs=30.6
Q ss_pred CEEECCHHHHHHCCCCEEEEC-CCCCCCCCCHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHC
Q ss_conf 011027346232757478716-99987066208889999999999988399-98899999988862
Q gi|254780286|r 45 DRMIHTTAFRRLKDKTQVFFH-RQRDHYRTRLMHTIEVSQIARSLARALRI-DEDLVEAIALAHDF 108 (410)
Q Consensus 45 dRIi~S~afRRL~~KTQVf~~-~~~d~~rtRLtHslEVa~i~rsi~~~l~~-~~dlvea~~L~HDi 108 (410)
.+|.-.-.|-.-.+.-|.-.- ...-+ ++|-++||.+-.. ..+. +++ +-+|||.||+
T Consensus 5 ~~l~~A~~~A~~~H~gQ~Rk~~~g~PY----i~H~~~VA~il~~---~~~~~d~~-~i~AalLHD~ 62 (178)
T 3nr1_A 5 AQLLEAADFAARKHRQQRRKDPEGTPY----INHPIGVARILTH---EAGITDIV-VLQAALLHDT 62 (178)
T ss_dssp HHHHHHHHHHHHHTTTCBCSSTTCCBT----THHHHHHHHHHHH---TSCCCCHH-HHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCH----HHHHHHHHHHHHH---HCCCCCHH-HHHHHHHHHH
T ss_conf 999999999999974897889999959----9999999999998---54888799-9999998678
No 50
>3nqw_A CG11900; stringent response, pyrophosphohydrolase, HD (histidine and acid) family ,PPGPP hydrolase, hydrolase; 2.90A {Drosophila melanogaster}
Probab=66.97 E-value=2.9 Score=20.03 Aligned_cols=56 Identities=29% Similarity=0.281 Sum_probs=31.4
Q ss_pred EEECCHHHHHHCCCCEEEECCC-CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
Q ss_conf 1102734623275747871699-98706620888999999999998839998899999988862
Q gi|254780286|r 46 RMIHTTAFRRLKDKTQVFFHRQ-RDHYRTRLMHTIEVSQIARSLARALRIDEDLVEAIALAHDF 108 (410)
Q Consensus 46 RIi~S~afRRL~~KTQVf~~~~-~d~~rtRLtHslEVa~i~rsi~~~l~~~~dlvea~~L~HDi 108 (410)
|++---.|-.-.++-|.--.++ .-+ .+|.++||.+-... ....+++ +-+|||.||+
T Consensus 8 k~~~A~~~A~~~H~gq~rk~g~~~PY----i~Hp~~Va~il~~~--~~~~d~~-~i~AalLHDv 64 (179)
T 3nqw_A 8 KFMECLQYAAFKHRQQRRKDPQETPY----VNHVINVSTILSVE--ACITDEG-VLMAALLHDV 64 (179)
T ss_dssp HHHHHHHHHHHHSTTCBCSSSSCCBT----HHHHHHHHHHHHTT--TCCCCHH-HHHHHHTTTH
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCH----HHHHHHHHHHHHHH--CCCCCHH-HHHHHHHCCH
T ss_conf 99999999999875881778999848----98999999999984--0369899-9999993351
No 51
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45
Probab=47.58 E-value=3.8 Score=19.21 Aligned_cols=13 Identities=15% Similarity=0.258 Sum_probs=5.4
Q ss_pred CCCCCCCCCHHHH
Q ss_conf 2554577657788
Q gi|254780286|r 128 YGGFDHNIQSFRI 140 (410)
Q Consensus 128 ~~gFegNaQ~~Ri 140 (410)
+.|.|-|..+.++
T Consensus 214 ~~G~E~~~~~~~l 226 (541)
T 2ar0_A 214 FIGLELVPGTRRL 226 (541)
T ss_dssp EEEEESCHHHHHH
T ss_pred HHHHHCCHHHHHH
T ss_conf 6302066999999
No 52
>2zxq_A Endo-alpha-N-acetylgalactosaminidase; broken TIM barrel, glycosidase, hydrolase; 2.00A {Bifidobacterium longum}
Probab=43.97 E-value=3.4 Score=19.50 Aligned_cols=22 Identities=32% Similarity=0.940 Sum_probs=17.5
Q ss_pred HHHCCCCCCCCCHHHH-----HHHHHH
Q ss_conf 8862899886547899-----999973
Q gi|254780286|r 105 AHDFGHPPFGHVGEDV-----LQELLS 126 (410)
Q Consensus 105 ~HDiGhpPFGH~GE~a-----l~~~~~ 126 (410)
+||=|||-|||.|+|+ ++.+++
T Consensus 362 ghd~~~~~~~~~~~~~gg~~~~~~l~~ 388 (1376)
T 2zxq_A 362 GHDSGHPDYGDIGQRLGGADDMNTMME 388 (1376)
T ss_dssp STTSSTTCTTCBCGGGTHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 866688750001434641899999998
No 53
>2gz4_A Hypothetical protein ATU1052; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.50A {Agrobacterium tumefaciens str} SCOP: a.211.1.1
Probab=43.93 E-value=13 Score=15.27 Aligned_cols=76 Identities=24% Similarity=0.296 Sum_probs=41.3
Q ss_pred HHHCCCCEEECCHHH-HHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCH
Q ss_conf 434000011027346-2327574787169998706620888999999999998839998899999988862899886547
Q gi|254780286|r 39 EFQRDRDRMIHTTAF-RRLKDKTQVFFHRQRDHYRTRLMHTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVG 117 (410)
Q Consensus 39 ~f~rD~dRIi~S~af-RRL~~KTQVf~~~~~d~~rtRLtHslEVa~i~rsi~~~l~~~~dlvea~~L~HDiGhpPFGH~G 117 (410)
|..-+..=|=|+-|. -|-.+-| .+++.=+=--||+-|+++.+.+.. +.++... -+||.|| +-
T Consensus 26 p~di~IeDIAh~Ls~~~R~~G~t------~~~~fySVAqHsvlv~~~~~~~~~--~~~~~~~-L~aLLHD--------A~ 88 (207)
T 2gz4_A 26 PLDVEIADIAHGLARVARWNGQT------RGDHAFTVAQHCLIVETIFCRMCP--GATPDEM-QMALLHD--------AP 88 (207)
T ss_dssp GGGCCHHHHHHHHTTCBSGGGCC------SSSSCCBHHHHHHHHHHHHHHHCT--TCCHHHH-HHHHTTT--------TT
T ss_pred HHHCCHHHHHHHHHHHHHCCCCC------CCCCCCCHHHHHHHHHHHHHHHCC--CCCHHHH-HHHHHCC--------CH
T ss_conf 44486999999999874107866------898651199999999999998679--9998999-9998658--------78
Q ss_pred HHHHHHHHHHCCCC
Q ss_conf 89999997312554
Q gi|254780286|r 118 EDVLQELLSSYGGF 131 (410)
Q Consensus 118 E~al~~~~~~~~gF 131 (410)
|.+++++-+-+..+
T Consensus 89 E~~~GD~~tP~K~~ 102 (207)
T 2gz4_A 89 EYVIGDMISPFKSV 102 (207)
T ss_dssp HHHHCCCCGGGGGT
T ss_pred HHHHCCCCCHHHHH
T ss_conf 98864667178998
No 54
>2rhk_A NS1, NS1A, non-structural protein 1; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Influenza a virus} PDB: 2kkz_A 3ee9_A 3ee8_A 2gx9_A 3m5r_A
Probab=42.59 E-value=3.1 Score=19.85 Aligned_cols=33 Identities=30% Similarity=0.432 Sum_probs=25.6
Q ss_pred CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 654789999997312554577657788754321
Q gi|254780286|r 114 GHVGEDVLQELLSSYGGFDHNIQSFRIVTELEC 146 (410)
Q Consensus 114 GH~GE~al~~~~~~~~gFegNaQ~~Rilt~LE~ 146 (410)
||.+|++-+..=--.||+|-|-++.|+-..|+.
T Consensus 85 GHt~eDvknAigvLIgGlEWndntvrvse~lQR 117 (140)
T 2rhk_A 85 GHTIEDVKNAIGVLIGGLEWNDNTVRVSKTLQR 117 (140)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCEEEECHHHHH
T ss_pred CCCCHHHHHHHHHEECCEEECCCEEEHHHHHHH
T ss_conf 986078887687644111566966764577888
No 55
>3l4q_A NS1, NS1A, non-structural protein 1; PI3K, phosphoinositide-3-kinase, influenza virus, NS1; 2.30A {Influenza a virus}
Probab=40.66 E-value=4.2 Score=18.84 Aligned_cols=32 Identities=31% Similarity=0.508 Sum_probs=19.3
Q ss_pred CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 65478999999731255457765778875432
Q gi|254780286|r 114 GHVGEDVLQELLSSYGGFDHNIQSFRIVTELE 145 (410)
Q Consensus 114 GH~GE~al~~~~~~~~gFegNaQ~~Rilt~LE 145 (410)
||.+|++-+..=--.||+|-|-++.|+-..|+
T Consensus 102 GHt~eDVknAigvLIgGlEWndNtvrvse~lQ 133 (164)
T 3l4q_A 102 GHTAEDVKNAVGVLIGGLEWNDNTVRVSETLQ 133 (164)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTCEEEECHHHH
T ss_pred CCCHHHHHHHHHHEECCEEECCCEEEHHHHHH
T ss_conf 98617887768754411156696675457788
No 56
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=40.18 E-value=5.7 Score=17.85 Aligned_cols=13 Identities=15% Similarity=0.330 Sum_probs=6.7
Q ss_pred CCCCCCCCHHHHH
Q ss_conf 5545776577887
Q gi|254780286|r 129 GGFDHNIQSFRIV 141 (410)
Q Consensus 129 ~gFegNaQ~~Ril 141 (410)
.|.|=|..+.++.
T Consensus 252 ~G~e~~~~~~~la 264 (542)
T 3lkd_A 252 FGQELNTSTYNLA 264 (542)
T ss_dssp EEEESCHHHHHHH
T ss_pred EEEECCHHHHHHH
T ss_conf 7442667999999
No 57
>3d6r_B NS1, NS1A, non-structural protein 1; effector domain, alternative splicing, cytoplasm, HOST-virus interaction; 2.00A {Influenza a virus} PDB: 3kwi_A 3kwg_A
Probab=38.70 E-value=4.7 Score=18.48 Aligned_cols=32 Identities=31% Similarity=0.457 Sum_probs=25.3
Q ss_pred CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 65478999999731255457765778875432
Q gi|254780286|r 114 GHVGEDVLQELLSSYGGFDHNIQSFRIVTELE 145 (410)
Q Consensus 114 GH~GE~al~~~~~~~~gFegNaQ~~Rilt~LE 145 (410)
||..|++-+..=--.||+|-|-++.|+-..|+
T Consensus 96 GHt~edvknAigvLIgGleWNdNtvrvse~lQ 127 (158)
T 3d6r_B 96 GHSTEDVKNAIGILIGGLEWNDNSIRASENIQ 127 (158)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTCEEEECHHHH
T ss_pred CCCCHHHHHHHHHEECCEEECCCEEEHHHHHH
T ss_conf 98707877668754410156596675667788
No 58
>1ufb_A TT1696 protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.90A {Thermus thermophilus} SCOP: a.24.16.3
Probab=37.04 E-value=12 Score=15.57 Aligned_cols=24 Identities=25% Similarity=0.368 Sum_probs=14.9
Q ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf 99999888628998865478999999
Q gi|254780286|r 99 VEAIALAHDFGHPPFGHVGEDVLQEL 124 (410)
Q Consensus 99 vea~~L~HDiGhpPFGH~GE~al~~~ 124 (410)
+.| .|.+ .|.||.+|..-..+..+
T Consensus 42 lKA-ll~~-~g~~pk~H~l~~l~~~l 65 (127)
T 1ufb_A 42 LKG-LHLA-RGQVAWGHSILDLLADL 65 (127)
T ss_dssp HHH-HHHH-TTCCCCSSCHHHHHHTS
T ss_pred HHH-HHHH-CCCCCCCCCHHHHHHHH
T ss_conf 999-9998-59999873599999989
No 59
>3ecq_A Protein SPR0328, endo-alpha-N-acetylgalactosaminidase; distorted (beta/alpha)8 (TIM) barrel glycoside hydrolase domain, cell WALL; 2.90A {Streptococcus pneumoniae}
Probab=36.78 E-value=5.2 Score=18.18 Aligned_cols=16 Identities=31% Similarity=0.781 Sum_probs=14.0
Q ss_pred HHHCCCCCCCCCHHHH
Q ss_conf 8862899886547899
Q gi|254780286|r 105 AHDFGHPPFGHVGEDV 120 (410)
Q Consensus 105 ~HDiGhpPFGH~GE~a 120 (410)
+||=|||-+||.|+++
T Consensus 620 GHDSahpdY~~~~~Ra 635 (1531)
T 3ecq_A 620 GHDSGHLNYADIGKRI 635 (1531)
T ss_dssp STTSSTTCTTCBCGGG
T ss_pred CCCCCCCCHHHCCCCC
T ss_conf 8666896410014446
No 60
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5- methylpyrimidin-2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=34.45 E-value=8.1 Score=16.76 Aligned_cols=21 Identities=0% Similarity=-0.282 Sum_probs=15.6
Q ss_pred CHHHHHHCCCCEEEECCCCCC
Q ss_conf 734623275747871699987
Q gi|254780286|r 50 TTAFRRLKDKTQVFFHRQRDH 70 (410)
Q Consensus 50 S~afRRL~~KTQVf~~~~~d~ 70 (410)
..+++|+..+.+++..+-+..
T Consensus 55 ~~~~~~~~~~~~i~G~did~~ 75 (421)
T 2ih2_A 55 RAFREAHGTAYRFVGVEIDPK 75 (421)
T ss_dssp HHHHHHHCSCSEEEEEESCTT
T ss_pred HHHHHHCCCCCEEEEEECCHH
T ss_conf 999986776786999979899
No 61
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=30.96 E-value=17 Score=14.38 Aligned_cols=23 Identities=30% Similarity=0.626 Sum_probs=20.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 28998865478999999731255
Q gi|254780286|r 108 FGHPPFGHVGEDVLQELLSSYGG 130 (410)
Q Consensus 108 iGhpPFGH~GE~al~~~~~~~~g 130 (410)
|||-|+-..-|+-|.+.|..+|.
T Consensus 15 V~nlp~~~~te~~l~~~F~~~G~ 37 (96)
T 2kvi_A 15 IGNLPLKNVSKEDLFRIFSPYGH 37 (96)
T ss_dssp EESSTTSCCCHHHHHHHHTTTCC
T ss_pred EECCCCCCCCHHHHHHHHHHCCC
T ss_conf 93599687899999999987098
No 62
>1lgh_B LH II, B800/850, light harvesting complex II; bacteriochlorophyll, dexter energy transfer, foerster exciton transfer mechanism; HET: BCL LYC DET HTO; 2.40A {Phaeospirillum molischianum} SCOP: f.3.1.1
Probab=27.67 E-value=23 Score=13.46 Aligned_cols=16 Identities=38% Similarity=0.576 Sum_probs=9.8
Q ss_pred ECCCCHHHHHHHHHHH
Q ss_conf 0673369999999998
Q gi|254780286|r 380 LAGMTDSYAIREHHIL 395 (410)
Q Consensus 380 IAGMTD~YAi~ly~kL 395 (410)
.+|+||..|.+.|...
T Consensus 5 ~sGLT~~EA~EfH~~f 20 (45)
T 1lgh_B 5 LSGLTEEEAIAVHDQF 20 (45)
T ss_dssp SSSCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH
T ss_conf 6889999999999999
No 63
>2huo_A Inositol oxygenase; protein-substrate complex, HD domain fold, oxidoreductase; HET: INS; 2.00A {Mus musculus} SCOP: a.211.1.4 PDB: 3bxd_A*
Probab=24.91 E-value=25 Score=13.19 Aligned_cols=21 Identities=29% Similarity=0.417 Sum_probs=16.2
Q ss_pred CCCHHHHHHHHHHHHCCCCCC
Q ss_conf 999889999998886289988
Q gi|254780286|r 93 RIDEDLVEAIALAHDFGHPPF 113 (410)
Q Consensus 93 ~~~~dlvea~~L~HDiGhpPF 113 (410)
+.++|=.+-+||.||+|--.+
T Consensus 114 ~p~~dW~qL~GLiHDLGKvl~ 134 (289)
T 2huo_A 114 HPDKDWFHLVGLLHDLGKIMA 134 (289)
T ss_dssp CTTCHHHHHHHHHTTGGGGGG
T ss_pred CCCCCHHHHHHHHHHHHHHHH
T ss_conf 899106775657755324642
No 64
>3eu6_A NS1, nonstructural protein 1; H5N1, cytoplasm, HOST-virus interaction, interferon antiviral system evasion, nucleus, RNA-binding; 2.70A {Influenza virus} PDB: 3f5t_A
Probab=24.21 E-value=9.6 Score=16.22 Aligned_cols=11 Identities=27% Similarity=0.537 Sum_probs=8.9
Q ss_pred CCCHHHHHHHH
Q ss_conf 00024788877
Q gi|254780286|r 153 GINLTWETLEG 163 (410)
Q Consensus 153 GLNLT~atL~~ 163 (410)
||+.--||+.|
T Consensus 51 gldie~at~~g 61 (215)
T 3eu6_A 51 GLDIETATRAG 61 (215)
T ss_dssp TCCHHHHHHHH
T ss_pred CCCHHHHHHHH
T ss_conf 52405877777
No 65
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=22.29 E-value=28 Score=12.76 Aligned_cols=11 Identities=36% Similarity=0.277 Sum_probs=4.6
Q ss_pred HHHHHHHCCHH
Q ss_conf 89987530677
Q gi|254780286|r 223 DGVRAGLLTVD 233 (410)
Q Consensus 223 Dai~~gli~~~ 233 (410)
|-..+|++=++
T Consensus 203 DiwSlGvilye 213 (327)
T 3a62_A 203 DWWSLGALMYD 213 (327)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 72326899999
No 66
>1o3u_A Conserved hypothetical protein TM0613; structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.75A {Thermotoga maritima} SCOP: a.24.16.3
Probab=21.75 E-value=29 Score=12.69 Aligned_cols=21 Identities=29% Similarity=0.382 Sum_probs=11.5
Q ss_pred HHHHHCCCCCCCCCHHHHHHHH
Q ss_conf 9888628998865478999999
Q gi|254780286|r 103 ALAHDFGHPPFGHVGEDVLQEL 124 (410)
Q Consensus 103 ~L~HDiGhpPFGH~GE~al~~~ 124 (410)
.|... |-||.+|.-..-++.+
T Consensus 50 ll~~~-g~~pktH~l~~L~~~l 70 (135)
T 1o3u_A 50 VFQRM-GAQAWGYSVPDFLGEL 70 (135)
T ss_dssp HHHHH-TCCCCCSSHHHHHHHH
T ss_pred HHHHC-CCCCCCCCHHHHHHHH
T ss_conf 99985-9999777799999999
No 67
>1wf1_A RNA-binding protein RALY; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wf2_A
Probab=21.15 E-value=29 Score=12.60 Aligned_cols=23 Identities=22% Similarity=0.393 Sum_probs=19.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 28998865478999999731255
Q gi|254780286|r 108 FGHPPFGHVGEDVLQELLSSYGG 130 (410)
Q Consensus 108 iGhpPFGH~GE~al~~~~~~~~g 130 (410)
|||-|++..=|+.|.++|..+|.
T Consensus 32 V~nL~~~~~te~~l~~~F~~~G~ 54 (110)
T 1wf1_A 32 IGNLNTALVKKSDVETIFSKYGR 54 (110)
T ss_dssp ECSCCCSSCCHHHHHHHHGGGSC
T ss_pred EECCCCCCCCHHHHHHHHHHCCC
T ss_conf 97999464999999999870598
No 68
>1dw9_A Cyanate lyase; cyanate degradation, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: SO4; 1.65A {Escherichia coli} SCOP: a.35.1.4 d.72.1.1 PDB: 1dwk_A* 2ivq_A 2ivb_A 2iu7_A 2iv1_A 2iuo_A 2ivg_A
Probab=21.10 E-value=23 Score=13.46 Aligned_cols=35 Identities=26% Similarity=0.348 Sum_probs=14.9
Q ss_pred CCCHHHHHHHHHHHHH-----HHHHCCCCHHHHHHHHHHH
Q ss_conf 6620888999999999-----9988399988999999888
Q gi|254780286|r 72 RTRLMHTIEVSQIARS-----LARALRIDEDLVEAIALAH 106 (410)
Q Consensus 72 rtRLtHslEVa~i~rs-----i~~~l~~~~dlvea~~L~H 106 (410)
|.-||--+.-|-..++ ||..+|+++.-|-++||+.
T Consensus 11 r~elte~Il~AK~~KGlTwe~IAe~vG~S~v~vaaa~lGQ 50 (156)
T 1dw9_A 11 RLDLADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQ 50 (156)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHTTSSSCHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCC
T ss_conf 8999999999999849999999999797999999998457
Done!