HHSEARCH alignment of GI: 254780286 and SCOP domain: d3b57a1

Alignment

Probab=97.31  E-value=0.0003  Score=47.72  Aligned_cols=46  Identities=17%  Similarity=0.169  Sum_probs=41.3

Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHH
Q ss_conf             2088899999999999883999889999998886289988654789
Q gi|254780286|r   74 RLMHTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVGED  119 (410)
Q Consensus        74 RLtHslEVa~i~rsi~~~l~~~~dlvea~~L~HDiGhpPFGH~GE~  119 (410)
                      -+.|++-|.+.|+.|+...+.+..+|++|||.||||..|+.+.++.
T Consensus        26 d~~H~~rV~~~A~~Ia~~e~~d~~~v~~AAlLHDi~~~k~~~~~~~   71 (201)
T d3b57a1          26 DWSHIKRVWKLSKEIQSKEGGDLFTIELAALFHDYSDIKLTTDEQE   71 (201)
T ss_dssp             CHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHTTCCC-------CH
T ss_pred             CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf             9999999999999999877764999999999864022246672777

SCOP domain information

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: HD domain
domain: Uncharacterized protein Lin1889
species: Listeria innocua [TaxId: 1642]