RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780286|ref|YP_003064699.1| deoxyguanosinetriphosphate triphosphohydrolase-like protein [Candidatus Liberibacter asiaticus str. psy62] (410 letters) >d2heka1 a.211.1.1 (A:1-369) Hypothetical protein aq_1910 {Aquifex aeolicus [TaxId: 63363]} Length = 369 Score = 89.2 bits (220), Expect = 6e-19 Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 3/158 (1%) Query: 39 EFQRDRDRMIHTTAFRRLKDKTQVFFHRQ--RDHYRTRLMHTIEVSQIARSLARALRIDE 96 R+I + F+RL+ Q+ TR H++ V I + +L++ E Sbjct: 14 RVGEAGLRLIDSFPFQRLRYVKQLGLAYLVFPSAQHTRFEHSLGVYHITERICESLKVKE 73 Query: 97 -DLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGGFDHNIQSFRIVTELECSYADFDGIN 155 +LV+ L HD GHPPF H E +L S + I+ I L+ Y+ D Sbjct: 74 KELVKLAGLLHDLGHPPFSHTTEVLLPRERSHEDFTERVIKETEIYEILKQDYSHEDIER 133 Query: 156 LTWETLEGLIGHNGPILPQDLDKPRIIPRIFSDYYHIH 193 L TL +L + + R+ + Sbjct: 134 LVRITLGKPEDEEEKLLSEIITGEFGSDRMDYLRRDAY 171 >d2o6ia1 a.211.1.1 (A:1-453) Hypothetical protein EF1143 {Enterococcus faecalis [TaxId: 1351]} Length = 453 Score = 46.3 bits (109), Expect = 5e-06 Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 29/124 (23%) Query: 46 RMIHTTAFRRLKDKTQV----FFHRQRDHYRTRLMHTIEVSQIARSLARALRI------- 94 +I++ +RL+ Q+ F +H +R H++ V +I R + + Sbjct: 33 DLINSAEVQRLRRIKQLGTSSFTFHGAEH--SRFSHSLGVYEITRRICEIFQRNYSVERL 90 Query: 95 --------DEDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGGFDHNIQSFRIVTELEC 146 + + AL HD GH P+ H +H + +I+T E Sbjct: 91 GENGWNDDERLITLCAALLHDVGHGPYSHT--------FEHIFDTNHEAITVQIITSPET 142 Query: 147 SYAD 150 Sbjct: 143 EVYQ 146 >d3dtoa1 a.211.1.1 (A:2-213) Uncharacterized protein BH2835 {Bacillus halodurans [TaxId: 86665]} Length = 212 Score = 40.1 bits (93), Expect = 3e-04 Identities = 16/89 (17%), Positives = 34/89 (38%) Query: 77 HTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGGFDHNIQ 136 H V+ +A+++ ++D +V+ AL HD E Q+L+ Q Sbjct: 28 HIRRVTLMAKAIGEQEKVDVFVVQIAALFHDLIDDKLVDDPETAKQQLIDWMEAAGVPSQ 87 Query: 137 SFRIVTELECSYADFDGINLTWETLEGLI 165 ++ + + G + T E ++ Sbjct: 88 KIDHTMDIINTISFKGGHGQSLATREAMV 116 >d2pq7a1 a.211.1.1 (A:1-217) Predicted hydrolase mes0020 {Uncultured thermotogales bacterium [TaxId: 221214]} Length = 217 Score = 37.8 bits (87), Expect = 0.002 Identities = 13/43 (30%), Positives = 16/43 (37%) Query: 77 HTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVGED 119 HT V + A +A + D AL HD P G D Sbjct: 36 HTFRVMENASEIASREKCDLQKAIIAALLHDIKRPHEALTGVD 78 >d3djba1 a.211.1.1 (A:2-214) Uncharacterized protein BT9727_1981 {Bacillus thuringiensis [TaxId: 1428]} Length = 213 Score = 33.1 bits (75), Expect = 0.044 Identities = 17/96 (17%), Positives = 36/96 (37%) Query: 77 HTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGGFDHNIQ 136 H V ++A SL+ + ++E AL HD E ++++ + Sbjct: 28 HIRRVHKMAISLSEQEGGNRFIIEMAALLHDVADEKLNESEEAGMKKVSDWLEELHVEEE 87 Query: 137 SFRIVTELECSYADFDGINLTWETLEGLIGHNGPIL 172 + V + + + G E++EG + + L Sbjct: 88 ESKHVLHIIANMSYKGGHGGKVESIEGKLVQDADRL 123 >d2pjqa1 a.211.1.1 (A:1-215) Uncharacterized protein LP2664 {Lactobacillus plantarum [TaxId: 1590]} Length = 215 Score = 31.9 bits (72), Expect = 0.10 Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 5/95 (5%) Query: 77 HTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPF---GHVGEDVLQELLSSYGGFDH 133 H V+++AR LA+ + +L A A HD L L++ Sbjct: 29 HLQRVNRLARRLAKDEGANLNLTLAAAWLHDVIDDKLMANPAKAHQDLIVQLNAQNVTAD 88 Query: 134 NIQSFRIVTELECSYADFDGINLTWETLEGLIGHN 168 + I ++ +LEG + + Sbjct: 89 DQT--AIFAIIDHMSFSKSFNGPQKLSLEGQVVQD 121 >d3b57a1 a.211.1.1 (A:1-201) Uncharacterized protein Lin1889 {Listeria innocua [TaxId: 1642]} Length = 201 Score = 30.8 bits (69), Expect = 0.22 Identities = 11/76 (14%), Positives = 25/76 (32%), Gaps = 5/76 (6%) Query: 59 KTQVFFHRQRDHYRT--RLMHTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHV 116 + + H ++ T H V ++++ + D +E AL HD+ Sbjct: 9 SAKNWMHSHFENETTGHDWSHIKRVWKLSKEIQSKEGGDLFTIELAALFHDYSDIKLTTD 68 Query: 117 GE---DVLQELLSSYG 129 + L + + Sbjct: 69 EQEATKTLINWMETKE 84 >d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 374 Score = 27.5 bits (60), Expect = 2.2 Identities = 11/47 (23%), Positives = 18/47 (38%) Query: 132 DHNIQSFRIVTELECSYADFDGINLTWETLEGLIGHNGPILPQDLDK 178 N+ +F + FDGI++ WE G G + D+ Sbjct: 156 KGNLPNFEGRGGAGAAAGIFDGIDIDWEWPGTNSGLAGNGVDTVNDR 202 >d1p1ja1 c.2.1.3 (A:9-322,A:438-533) Myo-inositol 1-phosphate synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 410 Score = 25.9 bits (57), Expect = 6.2 Identities = 6/34 (17%), Positives = 14/34 (41%), Gaps = 6/34 (17%) Query: 212 DDIAYDAHDIDDG------VRAGLLTVDMLKEIS 239 +D DI++ R+ +L D+ + + Sbjct: 132 NDFVVSGWDINNADLYEAMQRSQVLEYDLQQRLK 165 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.325 0.140 0.415 Gapped Lambda K H 0.267 0.0521 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 1,620,319 Number of extensions: 79219 Number of successful extensions: 284 Number of sequences better than 10.0: 1 Number of HSP's gapped: 280 Number of HSP's successfully gapped: 19 Length of query: 410 Length of database: 2,407,596 Length adjustment: 87 Effective length of query: 323 Effective length of database: 1,213,086 Effective search space: 391826778 Effective search space used: 391826778 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 54 (25.1 bits)