HHsearch alignment for GI: 254780287 and conserved domain: TIGR01911
>TIGR01911 HesB_rel_seleno HesB-related (seleno)protein; InterPro: IPR010965 This entry represents a family of small proteins related to HesB and its close homologs, which are likely to be involved in iron-sulphur cluster assembly. Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain..
Probab=98.88 E-value=1e-08 Score=72.18 Aligned_cols=91 Identities=23% Similarity=0.365 Sum_probs=80.1
Q ss_pred CCCEEECHHHHHHHHHHHHHCCC-CCEEEEEEECCCCCCEEEEEHHHHCCCCCCCEECCCCEEEEECHHHHH-HCCCCEE
Q ss_conf 84033188999999999972898-847999983688765146533321035211300468789998467765-4068799
Q gi|254780287|r 2 VPIIKITDAAATQIKTILESNSD-KKALRITIEGGGCSGFSYKFDLESKQSEDDIVFEKNGAQIFIDKISLA-YLTNSEI 79 (109)
Q Consensus 2 ~~mi~iT~~A~~~i~~l~~~~~~-~~~lRi~v~~gGCsG~~y~l~~~~~~~~~D~v~~~~gi~v~vd~~s~~-~L~g~~I 79 (109)
T Consensus 1 MkkV~~SD~Ay~efldfLK~n~~d~~V~rI~f~G~g~~GP~F~~~i~-e~nenD~~~~i~d~~f~ID~~lid~flgef~I 79 (93)
T TIGR01911 1 MKKVVMSDEAYKEFLDFLKKNDVDKDVVRIYFEGFGPSGPVFGIAIA-EKNENDEVVVIKDLTFLIDKSLIDQFLGEFSI 79 (93)
T ss_pred CCEEEECHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEEC-CCCCCCEEEEECCEEEEECCHHHHHCCCEEEE
T ss_conf 95788517788889876200689875699951462589975578855-87999747885442798650245330880699
Q ss_pred EEEECCCCCEEEEE
Q ss_conf 98727854523898
Q gi|254780287|r 80 DFVDNLLSKSFQIR 93 (109)
Q Consensus 80 Dy~~~~~g~gF~i~ 93 (109)
T Consensus 80 ~~~ee~fg~gl~le 93 (93)
T TIGR01911 80 SLREENFGKGLKLE 93 (93)
T ss_pred EEECCCCCCCEEEC
T ss_conf 86113373520309