Query gi|254780287|ref|YP_003064700.1| iron-sulfur cluster assembly accessory protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 109
No_of_seqs 119 out of 3041
Neff 7.2
Searched_HMMs 23785
Date Tue May 24 17:41:27 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780287.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2d2a_A SUFA protein; iron-sulf 100.0 3.2E-39 1.3E-43 249.2 11.1 107 3-109 39-145 (145)
2 1r94_A Protein YFHF; tetrameri 100.0 1.4E-37 6E-42 239.5 10.7 105 5-109 3-107 (118)
3 1nwb_A Hypothetical protein AQ 100.0 1.7E-37 7.1E-42 239.1 8.3 108 2-109 7-115 (124)
4 1x0g_A ISCA; [2Fe-2S], biosynt 100.0 1.7E-37 7.3E-42 239.0 5.9 106 4-109 1-109 (112)
5 2apn_A Protein HI1723; HI1723 100.0 1.5E-36 6.2E-41 233.6 7.7 109 1-109 5-114 (114)
6 2k4z_A DSRR; ISCA/SUFA/HESB li 99.9 2E-27 8.3E-32 180.3 10.2 97 2-99 20-118 (125)
7 2qgo_A Putative Fe-S biosynthe 98.2 7.6E-06 3.2E-10 54.2 8.8 87 3-96 4-103 (141)
8 2p2e_A Putative Fe-S biosynthe 97.9 9E-06 3.8E-10 53.7 4.7 82 1-84 1-96 (128)
9 3n57_C Atrial natriuretic fact 19.6 20 0.00082 16.7 0.1 15 28-42 13-28 (28)
10 1zfd_A SWI5; DNA binding motif 17.8 29 0.0012 15.7 0.7 7 102-108 10-16 (32)
No 1
>2d2a_A SUFA protein; iron-sulfur cluster, iron, ISCA, YADR, metal transport; 2.70A {Escherichia coli}
Probab=100.00 E-value=3.2e-39 Score=249.16 Aligned_cols=107 Identities=33% Similarity=0.735 Sum_probs=103.2
Q ss_pred CCEEECHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEHHHHCCCCCCCEECCCCEEEEECHHHHHHCCCCEEEEE
Q ss_conf 40331889999999999728988479999836887651465333210352113004687899984677654068799987
Q gi|254780287|r 3 PIIKITDAAATQIKTILESNSDKKALRITIEGGGCSGFSYKFDLESKQSEDDIVFEKNGAQIFIDKISLAYLTNSEIDFV 82 (109)
Q Consensus 3 ~mi~iT~~A~~~i~~l~~~~~~~~~lRi~v~~gGCsG~~y~l~~~~~~~~~D~v~~~~gi~v~vd~~s~~~L~g~~IDy~ 82 (109)
..|+||++|+++|+++++++++..+|||+|++||||||+|.|+++++++++|.+++.+|++|+||+.|++||+|++|||+
T Consensus 39 q~ItITd~A~~~ik~ll~~~~~~~~LRi~Vk~GGCsGf~Y~l~~~~~~~~dD~v~~~~g~~v~Vd~~S~~~L~Gs~IDy~ 118 (145)
T 2d2a_A 39 QGLTLTPAAAIHIRELVAKQPGMVGVRLGVKQTGCAGFGYVLDSVSEPDKDDLLFEHDGAKLFVPLQAMPFIDGTEVDFV 118 (145)
T ss_dssp CCCEECHHHHHHHHHHHHHSTTCCEEEEEEEEETTTEEEEEEEEESSCCTTEEEEEETTEEEEEEGGGHHHHTTCEEEEE
T ss_pred CEEEECHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCEEEECCCCEEEEEHHHHHHCCCCEEEEE
T ss_conf 60899999999999999739996179999937864885857353623567855897389899998688644589799885
Q ss_pred ECCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 278545238988888887788622469
Q gi|254780287|r 83 DNLLSKSFQIRNPNATSNCGCGTSFSI 109 (109)
Q Consensus 83 ~~~~g~gF~i~nPna~~~CgCG~SF~~ 109 (109)
+++++++|+|+||||+++||||+||+|
T Consensus 119 ~~~~gsgF~f~NPNa~~~CGCG~SFsV 145 (145)
T 2d2a_A 119 REGLNQIFKFHNPKAQNECGCGESFGV 145 (145)
T ss_dssp EETTEEEEEEECTTTCSCCCCBCEEEC
T ss_pred ECCCCCEEEEECCCCCCCCCCCCCCCC
T ss_conf 668867079989998952389877569
No 2
>1r94_A Protein YFHF; tetrameric, beta barrel, iron-sulfur cluster protein, pseudo-symmetric motifs, metal transport; 2.30A {Escherichia coli} SCOP: b.124.1.1 PDB: 1r95_A 1s98_A
Probab=100.00 E-value=1.4e-37 Score=239.54 Aligned_cols=105 Identities=35% Similarity=0.775 Sum_probs=102.0
Q ss_pred EEECHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEHHHHCCCCCCCEECCCCEEEEECHHHHHHCCCCEEEEEEC
Q ss_conf 33188999999999972898847999983688765146533321035211300468789998467765406879998727
Q gi|254780287|r 5 IKITDAAATQIKTILESNSDKKALRITIEGGGCSGFSYKFDLESKQSEDDIVFEKNGAQIFIDKISLAYLTNSEIDFVDN 84 (109)
Q Consensus 5 i~iT~~A~~~i~~l~~~~~~~~~lRi~v~~gGCsG~~y~l~~~~~~~~~D~v~~~~gi~v~vd~~s~~~L~g~~IDy~~~ 84 (109)
|+||++|+++|+++++++++..+|||+|++|||+||+|.|++++++.++|.+++.+|++|+||+.|++||+|++|||+++
T Consensus 3 ItIT~~A~~~i~~ll~~~~~~~~lRi~v~~gGC~G~~y~~~~~~~~~~~D~v~~~~g~~v~id~~s~~~L~G~~IDy~~~ 82 (118)
T 1r94_A 3 ITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKE 82 (118)
T ss_dssp CEECHHHHHHHHHHHHHHCCCSEEEEEEEECSSSCEEEEEEEESSCCTTEEEEEETTEEEEEEGGGHHHHTTCEEEEEEE
T ss_pred EEECHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCEEEECCCEEEEECHHHHHHHCCCEEEEEEC
T ss_conf 99899999999999974899728999994899786289887644589987999809979999779987637879987307
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 8545238988888887788622469
Q gi|254780287|r 85 LLSKSFQIRNPNATSNCGCGTSFSI 109 (109)
Q Consensus 85 ~~g~gF~i~nPna~~~CgCG~SF~~ 109 (109)
++++||+|+||||+++||||+||++
T Consensus 83 ~~~~gF~f~NPna~~~CgCG~SF~~ 107 (118)
T 1r94_A 83 GLNEGFKFTNPNVKDECGCGESFKL 107 (118)
T ss_dssp TTEEEEEEECTTCCC----------
T ss_pred CCCCCEEEECCCCCCCCCCCCCCCC
T ss_conf 8867479989998840589876233
No 3
>1nwb_A Hypothetical protein AQ_1857; QR6, structural genomics, protein structure initiative, NESG, reduced dimensionality PSI; NMR {Aquifex aeolicus} SCOP: b.124.1.1
Probab=100.00 E-value=1.7e-37 Score=239.11 Aligned_cols=108 Identities=43% Similarity=0.824 Sum_probs=103.5
Q ss_pred CCCEEECHHHHHHHHHHHHHCC-CCCEEEEEEECCCCCCEEEEEHHHHCCCCCCCEECCCCEEEEECHHHHHHCCCCEEE
Q ss_conf 8403318899999999997289-884799998368876514653332103521130046878999846776540687999
Q gi|254780287|r 2 VPIIKITDAAATQIKTILESNS-DKKALRITIEGGGCSGFSYKFDLESKQSEDDIVFEKNGAQIFIDKISLAYLTNSEID 80 (109)
Q Consensus 2 ~~mi~iT~~A~~~i~~l~~~~~-~~~~lRi~v~~gGCsG~~y~l~~~~~~~~~D~v~~~~gi~v~vd~~s~~~L~g~~ID 80 (109)
+.||+||++|+++|++++++++ +.++|||.|++|||+||+|.|.+++.++++|.+++.+|++|+||+.|++||+|++||
T Consensus 7 ~~mi~IT~~A~~~i~~l~~~~~~~~~~LRi~v~~gGC~G~~Y~l~~~~~~~~~D~~~~~~g~~v~id~~s~~~L~gs~ID 86 (124)
T 1nwb_A 7 QFIFKVTDKAVEEIKKVAQENNIENPILRIRVVPGGCSGFQYAMGFDDTVEEGDHVFEYDGVKVVIDPFSMPYVNGAELD 86 (124)
T ss_dssp CCCCEECHHHHHHHHHHHHTTTCSSCEEEECCCCCCTTCCCCCCCEECSCCSSCCCCCCSSSEEEECTTTGGGSTTCEEE
T ss_pred CCCEEECHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCEEEECCCEEEEECHHHHHHHCCCEEE
T ss_conf 86199889999999999985267886799998289977657731204552356526865985999854786452899999
Q ss_pred EEECCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 87278545238988888887788622469
Q gi|254780287|r 81 FVDNLLSKSFQIRNPNATSNCGCGTSFSI 109 (109)
Q Consensus 81 y~~~~~g~gF~i~nPna~~~CgCG~SF~~ 109 (109)
|++++++++|+|.||||+++||||+||++
T Consensus 87 y~~~~~~~~F~~~NPna~~~CgCG~SFs~ 115 (124)
T 1nwb_A 87 YVVDFMGGGFTIRNPNATGSCGCGSSFSC 115 (124)
T ss_dssp EEEETTEEEEEEECC--------------
T ss_pred EEECCCCCEEEEECCCCCCCCCCCCCCCC
T ss_conf 86268877179989898951588568751
No 4
>1x0g_A ISCA; [2Fe-2S], biosynthesis, cyanobacteria, domain swapping, Fe- S cluster, iron, iron-sulfur cluster protein, scaffold, sulfur; 2.50A {Thermosynechococcus elongatus}
Probab=100.00 E-value=1.7e-37 Score=239.04 Aligned_cols=106 Identities=25% Similarity=0.593 Sum_probs=100.5
Q ss_pred CEEECHHHHHHHHHHHHH---CCCCCEEEEEEECCCCCCEEEEEHHHHCCCCCCCEECCCCEEEEECHHHHHHCCCCEEE
Q ss_conf 033188999999999972---89884799998368876514653332103521130046878999846776540687999
Q gi|254780287|r 4 IIKITDAAATQIKTILES---NSDKKALRITIEGGGCSGFSYKFDLESKQSEDDIVFEKNGAQIFIDKISLAYLTNSEID 80 (109)
Q Consensus 4 mi~iT~~A~~~i~~l~~~---~~~~~~lRi~v~~gGCsG~~y~l~~~~~~~~~D~v~~~~gi~v~vd~~s~~~L~g~~ID 80 (109)
||+||++|+++|+++++. ++++.+|||.|++|||+||+|.|+++++++++|.+++.+|++|+||+.|++||+|++||
T Consensus 1 Mi~iT~~A~~~i~~l~~~~~~~~~~~~lRi~v~~gGCsG~~Y~~~~~~~~~~~D~v~~~~g~~v~id~~s~~~L~g~~ID 80 (112)
T 1x0g_A 1 MVELTPAAIQELERLQTHGVRRGQAAILRIQVQPSECGDWRYDLALVAEPKPTDLLTQSQGWTIAIAAEAAELLRGLRVD 80 (112)
T ss_dssp CCEECHHHHHHTCCCC----------CEEEEEEEBSSSSEEEEEEECSSCCTTCEEECSSSCCEEECGGGHHHHTTCEEE
T ss_pred CEEECHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCEEEECCCEEEEEECCHHHHCCCCEEE
T ss_conf 98979999999999997503258851899999689768868670262666767469962999999906065651998998
Q ss_pred EEECCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 87278545238988888887788622469
Q gi|254780287|r 81 FVDNLLSKSFQIRNPNATSNCGCGTSFSI 109 (109)
Q Consensus 81 y~~~~~g~gF~i~nPna~~~CgCG~SF~~ 109 (109)
|++++++++|+|+||||+++||||+||++
T Consensus 81 y~~~~~~~~F~~~NPna~~~CGCG~SF~~ 109 (112)
T 1x0g_A 81 YIEDLMGGAFRFHNPNASQTCGCGMAFRV 109 (112)
T ss_dssp EEEETTEEEEEEECTTCSEECSSSSEEEC
T ss_pred EECCCCCCCEEEECCCCCCCCCCCCCEEE
T ss_conf 83488757369989998830489987206
No 5
>2apn_A Protein HI1723; HI1723 solution structure, structural genomics, structure 2 function project, S2F, unknown function; NMR {Haemophilus influenzae}
Probab=100.00 E-value=1.5e-36 Score=233.61 Aligned_cols=109 Identities=44% Similarity=0.853 Sum_probs=102.6
Q ss_pred CCCCEEECHHHHHHHHHHHHHCC-CCCEEEEEEECCCCCCEEEEEHHHHCCCCCCCEECCCCEEEEECHHHHHHCCCCEE
Q ss_conf 98403318899999999997289-88479999836887651465333210352113004687899984677654068799
Q gi|254780287|r 1 MVPIIKITDAAATQIKTILESNS-DKKALRITIEGGGCSGFSYKFDLESKQSEDDIVFEKNGAQIFIDKISLAYLTNSEI 79 (109)
Q Consensus 1 M~~mi~iT~~A~~~i~~l~~~~~-~~~~lRi~v~~gGCsG~~y~l~~~~~~~~~D~v~~~~gi~v~vd~~s~~~L~g~~I 79 (109)
|...|+||++|+++|++++++++ +..+|||.|+++||+||+|.|++.++..++|++++.+|++|+||+.|++||+|++|
T Consensus 5 ~~~~i~iT~~A~~~i~~ll~~~~~~~~~lri~v~~gGC~G~~y~~~~~~~~~~~D~~~~~~g~~v~id~~s~~~L~G~~I 84 (114)
T 2apn_A 5 MAVPLTFTDAAANKVKSLISEEENTDLKLRVYITGGGCSGFQYGFTFDEKVNDGDLTIEKSGVQLVIDPMSLQYLIGGTV 84 (114)
T ss_dssp SCCSCEECSHHHHHHHHHHHHHTCSSCEEEECCCCSSSSCSCCCEEECCSCCSSCEEEECSSSEEEECHHHHHHHTTCEE
T ss_pred CCCCCEECHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCEEEEECCEEEEECHHHHHHCCCCEE
T ss_conf 67882889999999999998689995489999857998852888512577999979999399699998478510268799
Q ss_pred EEEECCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 987278545238988888887788622469
Q gi|254780287|r 80 DFVDNLLSKSFQIRNPNATSNCGCGTSFSI 109 (109)
Q Consensus 80 Dy~~~~~g~gF~i~nPna~~~CgCG~SF~~ 109 (109)
||++++++++|+|+||||+++||||+||+|
T Consensus 85 Dy~~~~~~~~F~~~NPna~~~CgCG~SF~v 114 (114)
T 2apn_A 85 DYTEGLEGSRFTVNNPNATSTCGCGSSFSI 114 (114)
T ss_dssp EEECSSSCCEEEEECHHHHCCCCCCCCSCC
T ss_pred EEEECCCCCCEEEECCCCCCCCCCCCCCCC
T ss_conf 886168766179979997953289757239
No 6
>2k4z_A DSRR; ISCA/SUFA/HESB like fold, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Allochromatium vinosum}
Probab=99.94 E-value=2e-27 Score=180.27 Aligned_cols=97 Identities=23% Similarity=0.361 Sum_probs=87.6
Q ss_pred CCCEEECHHHHHHHHHHHHHCC-CCCEEEEEEECCCCCCEEEEEHHHHCCCCCCCEECCCCEEEEECHHHHHHCCCCEEE
Q ss_conf 8403318899999999997289-884799998368876514653332103521130046878999846776540687999
Q gi|254780287|r 2 VPIIKITDAAATQIKTILESNS-DKKALRITIEGGGCSGFSYKFDLESKQSEDDIVFEKNGAQIFIDKISLAYLTNSEID 80 (109)
Q Consensus 2 ~~mi~iT~~A~~~i~~l~~~~~-~~~~lRi~v~~gGCsG~~y~l~~~~~~~~~D~v~~~~gi~v~vd~~s~~~L~g~~ID 80 (109)
..||+||++|+++|++++++++ +.++|||+|++|||+||+|.|+|++ +.++|.+++.+|++|+||+.|++||+|++||
T Consensus 20 ~~~i~iT~~A~~~i~~~~~~~~~~~~~LRl~V~~gGCsGf~Y~l~fd~-~~e~D~~~~~~gi~vvID~~S~~~L~GstID 98 (125)
T 2k4z_A 20 HMMFKLTPAAAEQVLKAAKQGGTEGMCLRLAAGRNPDGSIDYRMGFDD-LTEDDIRLTSEGVEIVIAPDYVSLLDQTTLD 98 (125)
T ss_dssp SSCEEECHHHHHHHHHHHHHSSSTTCEEEEEEEECTTSCEEEEEEEEC-CCSSSCEEECSSCEEECCTTTHHHHTTEEEE
T ss_pred CCEEEECHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEECC-CCCCCEEEEECCCEEEECHHHHHHCCCEEEE
T ss_conf 305998999999999999847998837999994688898485689787-7888589981795488562365141986998
Q ss_pred EEECCCC-CEEEEECCCCCC
Q ss_conf 8727854-523898888888
Q gi|254780287|r 81 FVDNLLS-KSFQIRNPNATS 99 (109)
Q Consensus 81 y~~~~~g-~gF~i~nPna~~ 99 (109)
|+++..+ ++|+|.|||+.+
T Consensus 99 yve~~~g~~gF~f~NPN~pn 118 (125)
T 2k4z_A 99 YVELEPGQFHFIFLNPRDPT 118 (125)
T ss_dssp EEEEETTEEEEEEECSSSCS
T ss_pred EECCCCCCCCEEEECCCCCC
T ss_conf 87278873787997959998
No 7
>2qgo_A Putative Fe-S biosynthesis protein; PSI-2, NYSGXRC, 10399G, Fe-S cluster protein, structural genomics; 2.04A {Lactobacillus acidophilus ncfm}
Probab=98.20 E-value=7.6e-06 Score=54.16 Aligned_cols=87 Identities=23% Similarity=0.330 Sum_probs=64.9
Q ss_pred CCEEECHHHHHHHHHHHHHCCCCCEEEEEE---------ECCCCC-CEEEEEHHHHCCCCC-CCEECCC-CEEEEECHHH
Q ss_conf 403318899999999997289884799998---------368876-514653332103521-1300468-7899984677
Q gi|254780287|r 3 PIIKITDAAATQIKTILESNSDKKALRITI---------EGGGCS-GFSYKFDLESKQSED-DIVFEKN-GAQIFIDKIS 70 (109)
Q Consensus 3 ~mi~iT~~A~~~i~~l~~~~~~~~~lRi~v---------~~gGCs-G~~y~l~~~~~~~~~-D~v~~~~-gi~v~vd~~s 70 (109)
.-|+||++|+++|++.+. +...|.+.. .+|+|+ |-.|.|-+.++..++ |..++.+ |+++++...+
T Consensus 4 M~It~T~~A~e~L~~k~~---~~~~llL~~dDG~g~Ys~~Gg~C~i~~~f~Li~vd~~d~dYd~~Iesn~G~~iy~~~~~ 80 (141)
T 2qgo_A 4 LNIKFTDNAVDYLKRREI---LDKILILITDDGGGKYSIQGGSCSMGAHFSIIWLDKVDPDYPVKIANEQNVKIYTSDFD 80 (141)
T ss_dssp CBEEECHHHHHHHHHTTC---TTSEEEEEECSSCSTTCC---------CEEEEEESSCCTTCCEECBCSSCCEEEECHHH
T ss_pred EEEEECHHHHHHHHHHHC---CCCEEEEEECCCCCCCCCCCCEEEECCEEEEEEECCCCCCCCEEEECCCCCEEEECCCC
T ss_conf 999989999999998528---99429999828988733458767609998999975788887637306999537866740
Q ss_pred HHHC-CCCEEEEEECCCCCEEEEECCC
Q ss_conf 6540-6879998727854523898888
Q gi|254780287|r 71 LAYL-TNSEIDFVDNLLSKSFQIRNPN 96 (109)
Q Consensus 71 ~~~L-~g~~IDy~~~~~g~gF~i~nPn 96 (109)
..|| ++.+|||.. +.|..++|.
T Consensus 81 ~~fld~~L~lD~~~----~tl~Lksds 103 (141)
T 2qgo_A 81 KTMLGPNMVMDYNA----GSLSLSSDE 103 (141)
T ss_dssp HTTSCSSEEEEEET----TEEEEEETT
T ss_pred HHHCCCCEEEECCC----CEEEECCCC
T ss_conf 64407981781688----979874854
No 8
>2p2e_A Putative Fe-S biosynthesis protein; hypothetical protein, beta-barrel, structural genomics, protein structure initiative, PSI-2; 2.48A {Lactobacillus salivarius UCC118} SCOP: b.124.1.1
Probab=97.92 E-value=9e-06 Score=53.75 Aligned_cols=82 Identities=23% Similarity=0.374 Sum_probs=60.0
Q ss_pred CCCCEEECHHHHHHHHHHHHHCCCCCEEEEEEE--------CCCCC-CEEEEEHHHHC----CCCCCCEECCCCEEEEEC
Q ss_conf 984033188999999999972898847999983--------68876-51465333210----352113004687899984
Q gi|254780287|r 1 MVPIIKITDAAATQIKTILESNSDKKALRITIE--------GGGCS-GFSYKFDLESK----QSEDDIVFEKNGAQIFID 67 (109)
Q Consensus 1 M~~mi~iT~~A~~~i~~l~~~~~~~~~lRi~v~--------~gGCs-G~~y~l~~~~~----~~~~D~v~~~~gi~v~vd 67 (109)
|.--|+||+.|+++|++++... ...|.+... ++||+ |-.|.|-+.++ ..+-|..++.+-.+|++.
T Consensus 1 ~~M~It~T~~A~e~L~~~~~~~--~~~L~L~~dDG~g~yS~g~~C~i~~~f~Liiv~~~~~~~~~yd~~iesn~g~i~~~ 78 (128)
T 2p2e_A 1 MSLKITVTDDAAKKLQRYTDDS--NAVLLLDFDDGVGALSKVGVCSLNSDFRILVVSKDMDYKKDYNEVIDSNIGKFYYK 78 (128)
T ss_dssp --CEEEECHHHHHHHHHHHTCT--TEEEEEEECSSCSGGGGSSCCCCSCCEEEEEEETTSSCTTTSCEEEEETTSCEEEC
T ss_pred CEEEEEECHHHHHHHHHHHCCC--CCEEEEEECCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCCEEECCCCCCEEEC
T ss_conf 9489998999999999862788--84799998289887777763560889899997377678985355611786158974
Q ss_pred HHHHHHCC-CCEEEEEEC
Q ss_conf 67765406-879998727
Q gi|254780287|r 68 KISLAYLT-NSEIDFVDN 84 (109)
Q Consensus 68 ~~s~~~L~-g~~IDy~~~ 84 (109)
+....|++ +.+|||.+.
T Consensus 79 ~~~~~ffd~~m~Ld~~~~ 96 (128)
T 2p2e_A 79 GYSKMYMDDNMKISLNTN 96 (128)
T ss_dssp GGGGGGSCSEEEEEECSS
T ss_pred CCCHHHHCCCCEEEECCC
T ss_conf 752323179738998388
No 9
>3n57_C Atrial natriuretic factor; insulysin, insulinase, A-beta degrading enzyme, cryptidase, hydrolase, hormone, disease mutation, diabetes mellitus; 3.03A {Homo sapiens} PDB: 1anp_A
Probab=19.62 E-value=20 Score=16.72 Aligned_cols=15 Identities=47% Similarity=1.010 Sum_probs=9.0
Q ss_pred EEEEEECC-CCCCEEE
Q ss_conf 99998368-8765146
Q gi|254780287|r 28 LRITIEGG-GCSGFSY 42 (109)
Q Consensus 28 lRi~v~~g-GCsG~~y 42 (109)
=||++++| ||+-|.|
T Consensus 13 drigaqsglgcns~r~ 28 (28)
T 3n57_C 13 DRIGAQSGLGCNSFRY 28 (28)
T ss_pred HHHCCCCCCCCCCCCC
T ss_conf 1110324667454549
No 10
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=17.81 E-value=29 Score=15.71 Aligned_cols=7 Identities=43% Similarity=1.208 Sum_probs=0.0
Q ss_pred CCCCCCC
Q ss_conf 8862246
Q gi|254780287|r 102 GCGTSFS 108 (109)
Q Consensus 102 gCG~SF~ 108 (109)
|||.+|+
T Consensus 10 gC~k~F~ 16 (32)
T 1zfd_A 10 GCDKAFV 16 (32)
T ss_dssp TCCCCBS
T ss_pred CCCCEEC
T ss_conf 9897738
Done!