HHsearch alignment for GI: 254780288 and conserved domain: KOG1294
>KOG1294 consensus.
Probab=97.86 E-value=2.1e-05 Score=49.68 Aligned_cols=150 Identities=21% Similarity=0.169 Sum_probs=87.7
Q ss_pred CCCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHH
Q ss_conf 43233010110002320799963104667854431012367777655332223201476000011014686742000012
Q gi|254780288|r 88 LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 (281)
Q Consensus 88 ~d~~~R~i~~~i~~~~~~i~v~n~y~P~g~~~~~~~~~~k~~~~~~l~~~l~~~~~~~~~vIi~GDFN~a~~~~D~~~~~ 167 (281)
T Consensus 9 ~~~~~~~~~~~k----~~~~~~~v~~~~~~~e~~~~---~~~~~~~l~~r~~~~~~~g~~~~~----~i~~~~i~--~~~ 75 (335)
T KOG1294 9 LDSEGRCVIVDK----EMFVLINVYCPRNSPEISKR---RLRFAKVLHYRVEKLLKQGNRKVL----NICPWDIA--GLE 75 (335)
T ss_pred HHCCCCEEEEEC----CCCCCCCEECCCCCCCCHHH---HHHHHHHHHHHHHHHHHHCCEEEE----ECCCHHHH--HHH
T ss_conf 221587042000----23321010042347743333---012466778878877770790476----22864565--456
Q ss_pred HCCCCCCC---CHHHHHHHHHCCCCCH-HHHCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEECHHHHHHHHCEEEEC
Q ss_conf 10487344---6345565321033100-0000133788872003578767525577713569994778983332028712
Q gi|254780288|r 168 IWENDACF---TLEVRQSFQKLQNMGF-TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 (281)
Q Consensus 168 ~~~~~~~~---~~~er~~~~~l~~~gl-~D~~r~~~~~~~~yT~~~~~~~~~~~n~G~RID~il~s~~l~~~v~~~~I~~ 243 (281)
T Consensus 76 ~~~~~~~~~~~~~~l~d-~~~~~~t~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~p~~v--------~~ 146 (335)
T KOG1294 76 ACEKFSGDPEISSELRD-LQCLLETKCTIDSGPCSHPTEKGYTHSLLSCASKKDGYSGEIDYSKFKPLKV--------HY 146 (335)
T ss_pred HHHCCCCCHHCCCCCHH-HHHHHHCCCEECCCCCEECCCCCCCCCEEECCCCCCCCCCEEEEEECCCCEE--------EE
T ss_conf 55334654100200123-5545322530046743012667734522524656678521033341122046--------54
Q ss_pred HHHCCCCCCCCCCEEEEE
Q ss_conf 220686767622199999
Q gi|254780288|r 244 KPRGWTKPSDHTPVIVSL 261 (281)
Q Consensus 244 ~~~~~~~~SDH~Pv~~~l 261 (281)
T Consensus 147 ~--~~~~~s~h~~~g~~i 162 (335)
T KOG1294 147 G--FGAMGSDHRPVGRVI 162 (335)
T ss_pred C--CCCCCCCCCCCCEEE
T ss_conf 3--666677668554178