HHsearch alignment for GI: 254780288 and conserved domain: PRK05421
>PRK05421 hypothetical protein; Provisional.
Probab=99.82 E-value=4.1e-20 Score=132.39 Aligned_cols=214 Identities=19% Similarity=0.298 Sum_probs=110.6
Q ss_pred CCCEEEEEEEC-CHHH-HHHHHHHHHHHHCCCEEEEEEEECCHHHCCHHHHHHCCCEE----EEEECCCCCCEEEEEEEC
Q ss_conf 70079987103-1888-89989999987289889998565794458977873289789----993047765148987403
Q gi|254780288|r 2 SVVTVATWNVN-SIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI----ETCGQKSYNGVAILSKYQ 75 (281)
Q Consensus 2 ~~lrI~TwNin-glr~-r~~~l~~~l~~~~pDIi~LQEvk~~~~~~~~~~~~~~gy~~----~~~~~k~~~GvaIlsk~~ 75 (281)
T Consensus 32 ~~~~llvWNI~Kq~~~~W~~~L~~l~--~~~dLvlLQEA~~~~~-l-~~~~~~~~~~~~~a~af~~~~~~~GVmtlS~~~ 107 (254)
T PRK05421 32 ERFRLLVWNIYKQQRAGWLSVLKNLG--KDADLVLLQEAQTTPE-L-VQFATANYLAADQAPAFVLPQHPSGVMTLSKAH 107 (254)
T ss_pred CCEEEEEEEEECCCCHHHHHHHHHHC--CCCCEEEEEECCCCHH-H-HHHHHCCCCHHHHHHHHHCCCCCCEEEECCCCC
T ss_conf 64069999942166530799999860--6687899961367765-7-998852551788612220479863478754111
Q ss_pred CEEEEECCCCCCCC-CCCCEECCCCCC-CCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 13786325556443-233010110002-3207999631046678544310123677776553322232014760000110
Q gi|254780288|r 76 PIEIVTHLPGDDLD-VQARFIEATFTI-NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 (281)
Q Consensus 76 ~~~v~~~~~~~~~d-~~~R~i~~~i~~-~~~~i~v~n~y~P~g~~~~~~~~~~k~~~~~~l~~~l~~~~~~~~~vIi~GD 153 (281)
T Consensus 108 p~~~c~~~~~EP~lr~pKs~Lit~YpL~~~q~LlVVNiHaINF-~~g~~~y---~~QL~~l~~~i~---~H~GPvI~AGD 180 (254)
T PRK05421 108 PVYCCPLREREPWLRLPKSALITEYPLPNGQTLLVVNIHAINF-SVGVDVY---SKQLEPIGDQIA---HHSGPIILAGD 180 (254)
T ss_pred HHHHCCCCCCCCCCCCCHHHHEEEECCCCCCEEEEEEEEEEEE-ECCHHHH---HHHHHHHHHHHH---HCCCCEEEECC
T ss_conf 2544235666722036312304772058997799999406766-5156999---999999999998---48998798445
Q ss_pred CCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHC-CCCCHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEECHHH
Q ss_conf 146867420000121048734463455653210-3310000001337888720035787675255777135699947789
Q gi|254780288|r 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL-QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 (281)
Q Consensus 154 FN~a~~~~D~~~~~~~~~~~~~~~~er~~~~~l-~~~gl~D~~r~~~~~~~~yT~~~~~~~~~~~n~G~RID~il~s~~l 232 (281)
T Consensus 181 FNt-------Ws~~R~-----------~~l~~~~~~~gL~ev~f--~~d~--------R~~~----~g~pLDhify-Rgl 227 (254)
T PRK05421 181 FNT-------WSRKRM-----------NALKRFARELGLKEVRF--TDDQ--------RRKA----FGRPLDHVFY-RGL 227 (254)
T ss_pred CCC-------CCHHHH-----------HHHHHHHHHCCCCEEEC--CCCC--------CEEC----CCCCCCEEEE-CCC
T ss_conf 330-------139999-----------99999999769808753--7677--------3452----5898656998-785
Q ss_pred HHHHHCEEEECHHHCCCCCCCCCCEEEEEECCCC
Q ss_conf 8333202871222068676762219999955887
Q gi|254780288|r 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 (281)
Q Consensus 233 ~~~v~~~~I~~~~~~~~~~SDH~Pv~~~l~lp~~ 266 (281)
T Consensus 228 --~~~~a~~~~-----t~~SDHnPl~~~f~L~~~ 254 (254)
T PRK05421 228 --NVEKASVLV-----TRASDHNPLLVEFSLKKP 254 (254)
T ss_pred --EEEEEECCC-----CCCCCCCCEEEEEEECCC
T ss_conf --233105565-----677877738899994289