HHsearch alignment for GI: 254780288 and conserved domain: TIGR03395
>TIGR03395 sphingomy sphingomyelin phosphodiesterase. Members of this family are bacterial proteins that act as sphingomyelin phosphodiesterase (EC 3.1.4.12), also called sphingomyelinase. Some members of this family have been shown to act as hemolysins.
Probab=99.93 E-value=1.8e-25 Score=162.41 Aligned_cols=234 Identities=18% Similarity=0.249 Sum_probs=128.3
Q ss_pred CEEEEEEEC----------CHHHHHHHHHHHHHHHCCCEEEEEEEECCH-HHCCHHHH-HHCCCEEEEEEC--CCC----
Q ss_conf 079987103----------188889989999987289889998565794-45897787-328978999304--776----
Q gi|254780288|r 4 VTVATWNVN----------SIRARIHNLAAWIKENNPDIICLQETKTED-KNFPFETL-QSLNYHIETCGQ--KSY---- 65 (281)
Q Consensus 4 lrI~TwNin----------glr~r~~~l~~~l~~~~pDIi~LQEvk~~~-~~~~~~~~-~~~gy~~~~~~~--k~~---- 65 (281)
T Consensus 1 lKIlsyNv~~lp~~l~~n~~q~~Ra~~I~~~~~i~~~DVvvlqEvFd~~a~~~l~~~L~~~YpY~T~vvg~~~~gwd~t~ 80 (283)
T TIGR03395 1 IKILSHNVYMLSTNLYPNWGQMERADLIASADYIKNQDVVILNEAFDTSASKRLLDNLREEYPYQTDVIGRSKKGWDKTL 80 (283)
T ss_pred CEEEEEEEEECCHHHCCCCCHHHHHHHHCCHHHCCCCCEEEEEHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 92788770325710137877789998744142136898899961228689999999788638841542476666764566
Q ss_pred ----------CCEEEEEEECCEEEEECCCCC----CCCCCCCEECCCCCCCCCEEEEEEEECCCCCCC--CCCCHHHHHH
Q ss_conf ----------514898740313786325556----443233010110002320799963104667854--4310123677
Q gi|254780288|r 66 ----------NGVAILSKYQPIEIVTHLPGD----DLDVQARFIEATFTINTQTLRIGNLYLPHGNPI--TSTKYDDKIS 129 (281)
Q Consensus 66 ----------~GvaIlsk~~~~~v~~~~~~~----~~d~~~R~i~~~i~~~~~~i~v~n~y~P~g~~~--~~~~~~~k~~ 129 (281)
T Consensus 81 g~~~~~~~~~gGv~I~Sk~PI~~~~~~if~~~~g~D~~a~KG~~y~kI~k~gk~~hv~~THlqa~d~~~~~~~~~~~R~~ 160 (283)
T TIGR03395 81 GNYSSSALEDGGVAIVSKWPIEEKIQYIFNKGCGADNLSNKGFAYVKINKNGKKFHVIGTHLQAQDSMCSKLGPASIRAN 160 (283)
T ss_pred CCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCHHHHCCCEEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHH
T ss_conf 76556613177489996787103468986577473120115708999987997999998144657876554115899999
Q ss_pred HHHHHHHHHHHH-HCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCEECC
Q ss_conf 776553322232-0147600001101468674200001210487344634556532103310000001337888720035
Q gi|254780288|r 130 WIKRFLRFASQR-LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW 208 (281)
Q Consensus 130 ~~~~l~~~l~~~-~~~~~~vIi~GDFN~a~~~~D~~~~~~~~~~~~~~~~er~~~~~l~~~gl~D~~r~~~~~~~~yT~~ 208 (281)
T Consensus 161 Q~~ei~~fi~~~~ip~~e~vi~aGDfNV~k~----------------s~E---Y~~Ml~~Ln~~~p-~---~~g~~~T~- 216 (283)
T TIGR03395 161 QLNEIQDFIDSKNIPKDETVLIGGDLNVNKG----------------SNE---YHDMFKTLNVSEP-R---YVGVPATW- 216 (283)
T ss_pred HHHHHHHHHHHCCCCCCCEEEEECCCCCCCC----------------CHH---HHHHHHHCCCCCC-C---CCCCCCCC-
T ss_conf 9999999998559998971899401442689----------------878---9999997289997-6---47986530-
Q ss_pred CCCCCCCC-----CCCCCEEEEEEECHHHHH-HHHCEEEEC--HHHCCC------CCCCCCCEEEEE
Q ss_conf 78767525-----577713569994778983-332028712--220686------767622199999
Q gi|254780288|r 209 DYYADSWS-----KNKGIRIDHIMLSPEATS-LLHSARIDT--KPRGWT------KPSDHTPVIVSL 261 (281)
Q Consensus 209 ~~~~~~~~-----~n~G~RID~il~s~~l~~-~v~~~~I~~--~~~~~~------~~SDH~Pv~~~l 261 (281)
T Consensus 217 D~~~N~~a~~~y~~~~~e~LDYIl~s~~h~qp~~~~n~v~~p~s~~~w~~~~~~~dlSDHyPV~~~i 283 (283)
T TIGR03395 217 DATTNSIAKYYYPKEEPEYLDYIFVSKSHAQPPVWQNKVLDPKSVTSWFKKYTYDDFSDHYPVYGFI 283 (283)
T ss_pred CCCCCHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCEECCCCCCHHHCCCCCCCCCCCCCEEEEC
T ss_conf 8764334552369998530689999788668750303175121141221264567767778536449