HHsearch results for GI: 254780288 and protein with PDBid: 2a40_B
>2a40_B Deoxyribonuclease-1; WAVE, WH2, WAsp, actin, DNAse I, ARP2/3, structural protein; HET: HIC NAG ATP; 1.80A {Bos taurus} SCOP: d.151.1.1 PDB: 1dnk_A* 2a3z_B* 2a41_B* 2a42_B* 2d1k_B* 2dnj_A* 3cjc_D* 3dni_A* 1atn_D*
Probab=99.94 E-value=1.4e-26 Score=167.55 Aligned_cols=223 Identities=15% Similarity=0.083 Sum_probs=105.2
Q ss_pred CEEEEEEEC--CHH-HHHHHHHHHHHH--HCCCEEEEEEEECCHHHCCHHHHH------HCCCEEEEEECCCC----CCE
Q ss_conf 079987103--188-889989999987--289889998565794458977873------28978999304776----514
Q gi|254780288|r 4 VTVATWNVN--SIR-ARIHNLAAWIKE--NNPDIICLQETKTEDKNFPFETLQ------SLNYHIETCGQKSY----NGV 68 (281)
Q Consensus 4 lrI~TwNin--glr-~r~~~l~~~l~~--~~pDIi~LQEvk~~~~~~~~~~~~------~~gy~~~~~~~k~~----~Gv 68 (281)
|||+||||+ |.. .+...+.+.|.+ .+|||||||||+..+.......+. ...|.+...+..+. .++
T Consensus 1 lrI~swNi~~~g~~~~~~~~~~~~i~~~~~~~DIv~LQEv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (260)
T 2a40_B 1 LKIAAFNIRTFGETKMSNATLASYIVRIVRRYDIVLIQEVRDSHLVAVGKLLDYLNQDDPNTYHYVVSEPLGRNSYKERY 80 (260)
T ss_dssp CEEEEEEEEEESHHHHHSHHHHHHHHHHHTTCSEEEEEEECCTTSHHHHHHHHHHTSSSTTSCEEEECCCBCSSSCCBEE
T ss_pred CEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEE
T ss_conf 98999966834778666399999999972799989999422477718999998766325884168855777766557457
Q ss_pred EEEEEECCEEEEEC--CCCCCCC----CCCCE-ECC---CCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 89874031378632--5556443----23301-011---00023207999631046678544310123677776553322
Q gi|254780288|r 69 AILSKYQPIEIVTH--LPGDDLD----VQARF-IEA---TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 (281)
Q Consensus 69 aIlsk~~~~~v~~~--~~~~~~d----~~~R~-i~~---~i~~~~~~i~v~n~y~P~g~~~~~~~~~~k~~~~~~l~~~l 138 (281)
+++.+.....+... .+..... ...|. +.+ .....+..+.++++|+..+.. ..+..+...+.+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~h~~~~~~------~~~~~~~~~~~~~~ 154 (260)
T 2a40_B 81 LFLFRPNKVSVLDTYQYDDGCESCGNDSFSREPAVVKFSSHSTKVKEFAIVALHSAPSDA------VAEINSLYDVYLDV 154 (260)
T ss_dssp EEEECTTTCEEEEEEECCTTSTTTHHHHCSSCCEEEEEECTTSSSSEEEEEECCCCGGGH------HHHHHHHHHHHHHH
T ss_pred EEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCH------HHHHHHHHHHHHHH
T ss_conf 999605530466520124566677554333110278898526773589998504786324------89999999999999
Q ss_pred HHHHCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCH-HHHC-CCCCCCCCCEECCCCCCCCCC
Q ss_conf 23201476000011014686742000012104873446345565321033100-0000-133788872003578767525
Q gi|254780288|r 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF-TDAI-RATHDTHHLYSFWDYYADSWS 216 (281)
Q Consensus 139 ~~~~~~~~~vIi~GDFN~a~~~~D~~~~~~~~~~~~~~~~er~~~~~l~~~gl-~D~~-r~~~~~~~~yT~~~~~~~~~~ 216 (281)
.. ...+.|+|+|||||..+.... ++.+...++ .+.. ....+... ++ ..
T Consensus 155 ~~-~~~~~~~iv~GDfN~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~ 204 (260)
T 2a40_B 155 QQ-KWHLNDVMLMGDFNADCSYVT--------------------SSQWSSIRLRTSSTFQWLIPDSA--DT-------TA 204 (260)
T ss_dssp HH-HHCCCCEEEEEECCCSTTTSC--------------------GGGGGGCHHHHSTTEEESSCTTC--CC-------BS
T ss_pred HH-HCCCCCEEEECCCCCCCCCCH--------------------HHHHHHHCCCCCCCCCCCCCCCC--CC-------CC
T ss_conf 86-365888899466666777525--------------------78898613522222112478888--53-------34
Q ss_pred CCCCCEEEEEEECHHHHHHHH---CEEEECHHH-------CCCCCCCCCCEEEEEE
Q ss_conf 577713569994778983332---028712220-------6867676221999995
Q gi|254780288|r 217 KNKGIRIDHIMLSPEATSLLH---SARIDTKPR-------GWTKPSDHTPVIVSLD 262 (281)
Q Consensus 217 ~n~G~RID~il~s~~l~~~v~---~~~I~~~~~-------~~~~~SDH~Pv~~~l~ 262 (281)
.+.++||||||+|+.+..... .+.+..... ....+|||+||+++|.
T Consensus 205 ~~~~~~iD~i~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~SDH~PV~~~ls 260 (260)
T 2a40_B 205 TSTNCAYDRIVVAGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 260 (260)
T ss_dssp SSCCCCCEEEEEESHHHHHHBCTTCCEECCHHHHTTCCHHHHHHHCSBCCEEEEBC
T ss_pred CCCCCCEEEEEECHHHHCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEC
T ss_conf 79898604999761683662714702675131102566345897187558899979