Probab=100.00 E-value=1.4e-45 Score=273.06 Aligned_cols=231 Identities=25% Similarity=0.349 Sum_probs=167.9
Q ss_pred CCCEEEEEEECCHHH--HHHHHHHHHHHHCCCEEEEEEEECCHHHCCHHHHHHCCCEEEEEECCCCCCEEEEEEECCEEE
Q ss_conf 700799871031888--899899999872898899985657944589778732897899930477651489874031378
Q gi|254780288|r 2 SVVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79 (281)
Q Consensus 2 ~~lrI~TwNinglr~--r~~~l~~~l~~~~pDIi~LQEvk~~~~~~~~~~~~~~gy~~~~~~~k~~~GvaIlsk~~~~~v 79 (281)
++|||+||||||++. +...+.++|++++|||||||||+.....+........+|.+.....++++|+||++|+++...
T Consensus 4 ~~~kv~s~Nv~g~~~~~~~~~i~~~i~~~~~DIi~LQE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~k~~~~~~ 83 (236)
T d1vyba_ 4 SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQANGKQKKAGVAILVSDKTDFK 83 (236)
T ss_dssp CCEEEEEEECSCCCSHHHHHHHHHHHHHHCCSEEEEECCCCCTTSGGGCCCTTCCEEEEECCSSSSCCEEEEECTTCCCE
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCC
T ss_conf 98699999928961245588999999877985999983547623263454225404897510112221146760365212
Q ss_pred EECCCCCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
Q ss_conf 63255564432330101100023207999631046678544310123677776553322232014760000110146867
Q gi|254780288|r 80 VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 (281)
Q Consensus 80 ~~~~~~~~~d~~~R~i~~~i~~~~~~i~v~n~y~P~g~~~~~~~~~~k~~~~~~l~~~l~~~~~~~~~vIi~GDFN~a~~ 159 (281)
..... .+.++++..+.+...+..++++|+|+|++.. . ++..++...+.. ..++|+|+|||||+++.
T Consensus 84 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~---~------~~~~~~~~~~~~--~~~~~~Il~GDfN~~~~ 149 (236)
T d1vyba_ 84 PTKIK---RDKEGHYIMVKGSIQQEELTILNIYAPNTGA---P------RFIKQVLSDLQR--DLDSHTLIMGDFNTPLS 149 (236)
T ss_dssp EEEEE---ECTTSSEEEEEEEETTEEEEEEEEECCSSSH---H------HHHHHHHHHTTT--TCCTTEEEEEECSSCSS
T ss_pred CCCCC---CCCCCCCEEEEEEECCCCCEEEEECCCCCCC---H------HHHHHHHHHHCC--CCCCEEEEEECCCCCCC
T ss_conf 35642---1113431001343136762467741321220---7------888766554113--44320699630255543
Q ss_pred CCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEECHHHHHHHHCE
Q ss_conf 42000012104873446345565321033100000013378887200357876752557771356999477898333202
Q gi|254780288|r 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 (281)
Q Consensus 160 ~~D~~~~~~~~~~~~~~~~er~~~~~l~~~gl~D~~r~~~~~~~~yT~~~~~~~~~~~n~G~RID~il~s~~l~~~v~~~ 239 (281)
+.|..+. .....+++.....+.+.|+.|+||..++.+..||||+...+ .++||||||+|+.+..++..+
T Consensus 150 ~~d~~~~------~~~~~~~~~~~~~~~~~~~~d~~r~~~~~~~~~~~~~~~~~-----~~~RiD~il~s~~~~~~~~~~ 218 (236)
T d1vyba_ 150 TLDRSTR------QKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPHH-----TYSKIDHIVGSKALLSKCKRT 218 (236)
T ss_dssp GGGBTTC------CCCCHHHHHHHHHHHHTTEEEHHHHHCTTCCCCSEEETTTT-----EEECCEEEEEEGGGGGGEEEE
T ss_pred HHHHCCC------CCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCC-----CCCEEEEEEECHHHHHHCEEE
T ss_conf 3441354------21103578899999864123321100147864333278899-----776367999871897224089
Q ss_pred EEECHHHCCCCCCCCCCEEEEEE
Q ss_conf 87122206867676221999995
Q gi|254780288|r 240 RIDTKPRGWTKPSDHTPVIVSLD 262 (281)
Q Consensus 240 ~I~~~~~~~~~~SDH~Pv~~~l~ 262 (281)
+|+.. .+|||+||+++|.
T Consensus 219 ~i~~~-----~~SDH~pv~~~lk 236 (236)
T d1vyba_ 219 EIITN-----YLSDHSAIKLELR 236 (236)
T ss_dssp EEECC-----SSSSSCEEEEEEC
T ss_pred EECCC-----CCCCCCCEEEEEC
T ss_conf 98999-----7998101899959
class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Endonuclease domain of LINE-1 reverse transcriptase homolog
species: Human (Homo sapiens) [TaxId: 9606]