HHSEARCH alignment of GI: 254780288 and SCOP domain: d1zwxa1

Alignment
>d1zwxa1 d.151.1.3 (A:41-333) Sphingomyelin phosphodiesterase C {Listeria ivanovii [TaxId: 1638]}
Probab=100.00  E-value=7.4e-33  Score=201.42  Aligned_cols=242  Identities=15%  Similarity=0.157  Sum_probs=130.5

Q ss_pred             CCCCEEEEEEEC----------CHHHHHHHHHHHHHHHCCCEEEEEEEECCHHH-CCHHHHHHCCCEEEEE---------
Q ss_conf             970079987103----------18888998999998728988999856579445-8977873289789993---------
Q gi|254780288|r    1 MSVVTVATWNVN----------SIRARIHNLAAWIKENNPDIICLQETKTEDKN-FPFETLQSLNYHIETC---------   60 (281)
Q Consensus         1 m~~lrI~TwNin----------glr~r~~~l~~~l~~~~pDIi~LQEvk~~~~~-~~~~~~~~~gy~~~~~---------   60 (281)
                      +.-|||+||||.          |.+.|.+.+.+.|...+|||||||||...... .....+.. .|.....         
T Consensus         2 ~~~lki~s~Nv~~~~~~~~~~~~~~~r~~~i~~~i~~~~~DVi~LQEv~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~   80 (293)
T d1zwxa1           2 PGNFKITSHNVYLFSRNIYPNWGQMHRADLIAQADYMKNNDVVILNEAFDTSASHRLLNNLRE-MYPHQTPVIGRSKHGW   80 (293)
T ss_dssp             CCSCEEEEEEEEECCTTTSTTSCHHHHHHHHHTSGGGSSCSEEEEEEECSHHHHHHHHHHTTT-TCCEECCCTTSCSTTC
T ss_pred             CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH-HCCCEEHHCCCCCCCC
T ss_conf             997789988468576555898278999999999997569988999846774258999987765-4140000011345432


Q ss_pred             -----E----CCCCCCEEEEEEECCEEEEECCCCCC--CC--CCCCEECCCCCCCCCEEEEEEEECCCCCCCCCC--CHH
Q ss_conf             -----0----47765148987403137863255564--43--233010110002320799963104667854431--012
Q gi|254780288|r   61 -----G----QKSYNGVAILSKYQPIEIVTHLPGDD--LD--VQARFIEATFTINTQTLRIGNLYLPHGNPITST--KYD  125 (281)
Q Consensus        61 -----~----~k~~~GvaIlsk~~~~~v~~~~~~~~--~d--~~~R~i~~~i~~~~~~i~v~n~y~P~g~~~~~~--~~~  125 (281)
                           .    ....+|++|+||+|+...........  .+  ....++.+.+...+..+.|+|+|++++.+....  ...
T Consensus        81 ~~~~~~~~~~~~~~~g~~ilsr~pi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Hl~~~~~~~~~~~~~~  160 (293)
T d1zwxa1          81 DKTEGNYSNFALEDGGVAVVSQWPIVEKSQHIFQRGGGADRLSNKGFAYVKIMKNGKPYHIIGTHTQADDSLISKDTSRA  160 (293)
T ss_dssp             SEEEC-----CCBCCCCEEEESSCEEEEEEEECSCCCGGGGGBCCEEEEEEEEETTEEEEEEEEECCCCCTTSCHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCCHHHHHH
T ss_conf             21114544320126626999646754421565202454200134148999996399347999844103677530357799


Q ss_pred             HHHHHHHHHHHHHHHH-HCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCC-CC
Q ss_conf             3677776553322232-014760000110146867420000121048734463455653210331000000133788-87
Q gi|254780288|r  126 DKISWIKRFLRFASQR-LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HH  203 (281)
Q Consensus       126 ~k~~~~~~l~~~l~~~-~~~~~~vIi~GDFN~a~~~~D~~~~~~~~~~~~~~~~er~~~~~l~~~gl~D~~r~~~~~-~~  203 (281)
                      .|..+++++..++.+. ...+.|+|||||||+.+.+....                ..++   ..++.++....... ..
T Consensus       161 ~r~~~~~~~~~~~~~~~~~~~~~vil~GDfN~~~~~~~~~----------------~~~~---~~~~~~~~~~~~~~~~~  221 (293)
T d1zwxa1         161 IRAEQMQEIQTFIAKKNIPKDEIIFIGGDLNVNYGTDEYH----------------DMLK---LLNVSSPANFNGQMATW  221 (293)
T ss_dssp             HHHHHHHHHHHHHHHHTCCTTSEEEEEEECCCCTTSHHHH----------------HHHH---HHTBCCCTTCCTTSCSB
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHH----------------HHHH---HCCCCCHHHCCCCCCCC
T ss_conf             9999898865455540368898489980669898855788----------------8875---33655532304677644


Q ss_pred             CEECCCCCCCCCCCCCCCEEEEEEECHHHHHHHHCE-EE----------ECHHH--CCCCCCCCCCEEEEEE
Q ss_conf             200357876752557771356999477898333202-87----------12220--6867676221999995
Q gi|254780288|r  204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-RI----------DTKPR--GWTKPSDHTPVIVSLD  262 (281)
Q Consensus       204 ~yT~~~~~~~~~~~n~G~RID~il~s~~l~~~v~~~-~I----------~~~~~--~~~~~SDH~Pv~~~l~  262 (281)
                      ..++..+....+..+.+.||||||+|+......... .+          .....  ....+|||+||+|+++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~iD~I~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~PV~A~~~  293 (293)
T d1zwxa1         222 DPTTNSMLKESYPKAAPEYLDYIFVENGHARPHSWHNKVLHTKSPQWSVKSWFKTYTYQDFSDHYPVVGFTD  293 (293)
T ss_dssp             CTTTCHHHHHHCTTSCCBCCEEEEEBTTSCCCSCEEEEECCCCCCCEEEEETTEEEEECCSSSSCCEEEEEC
T ss_pred             CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
T ss_conf             553244445455789886078999846303643222047752166301134335688899488178499959


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Sphingomyelin phosphodiesterase-like
domain: Sphingomyelin phosphodiesterase C
species: Listeria ivanovii [TaxId: 1638]