PSIBLAST alignment of GI: 254780288 and protein with PDB id: 1bix

>gi|157830335|pdb|1BIX|A Chain A, The Crystal Structure Of The Human Dna Repair Endonuclease Hap1 Suggests The Recognition Of Extra-Helical Deoxyribose At Dna Abasic Sites Length = 287

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 29  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 88

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 89  SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 145

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 146 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 202

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 203 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 262

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 263 ALCDSKIRSKALG----SDHCPITLYLAL 287