PSIBLAST alignment of GI: 254780288 and protein with PDB id: 1e9n

gi|13399540|pdb|1E9N|A Chain A, A Second Divalent Metal Ion In The Active Site Of A New Crystal Form Of Human ApurinicAPYRIMIDINIC ENDONUCLEASE, Ape1, And Its Implications For The Catalytic Mechanism Length = 318
>gi|13399541|pdb|1E9N|B Chain B, A Second Divalent Metal Ion In The Active Site Of A New Crystal Form Of Human ApurinicAPYRIMIDINIC ENDONUCLEASE, Ape1, And Its Implications For The Catalytic Mechanism Length = 318

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318