RPSBLAST alignment for GI: 254780288 and conserved domain: TIGR00195

>gnl|CDD|161757 TIGR00195, exoDNase_III, exodeoxyribonuclease III. The model brings in reverse transcriptases at scores below 50, model also contains eukaryotic apurinic/apyrimidinic endonucleases which group in the same family. Length = 254

 Score =  226 bits (578), Expect = 5e-60
 Identities = 89/256 (34%), Positives = 135/256 (52%), Gaps = 4/256 (1%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65
           + +WNVN +RAR+H   AW+KEN PD++CLQETK +D+ FP E      YH+   GQK Y
Sbjct: 3   IISWNVNGLRARLHKGLAWLKENQPDVLCLQETKVQDEQFPLEPFHKEGYHVFFSGQKGY 62

Query: 66  NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125
           +GVAI SK +P+ +      ++ D + R I A F     +  + N Y P+G+   S K  
Sbjct: 63  SGVAIFSKEEPLSVRRGFGVEEEDAEGRIIMAEF----DSFLVINGYFPNGSRDDSEKLP 118

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185
            K+ W++    +  + ++ ++P++  GD NI P   D ++P    N   F  E R+   +
Sbjct: 119 YKLQWLEALQNYLEKLVDKDKPVLICGDMNIAPTEIDLHSPDENRNHTGFLPEEREWLDR 178

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245
           L   G  D  R  +     YS+WDY   +  +N+G RID+ ++S           ID   
Sbjct: 179 LLEAGLVDTFRKFNPDEGAYSWWDYRTKARDRNRGWRIDYFLVSEPLKERCVDCGIDYDI 238

Query: 246 RGWTKPSDHTPVIVSL 261
           RG  KPSDH PV++  
Sbjct: 239 RGSEKPSDHCPVVLEF 254