RPSBLAST alignment for GI: 254780288 and conserved domain: TIGR00633

>gnl|CDD|161970 TIGR00633, xth, exodeoxyribonuclease III (xth). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Length = 255
 Score =  221 bits (565), Expect = 2e-58
 Identities = 89/261 (34%), Positives = 142/261 (54%), Gaps = 12/261 (4%)

Query: 6   VATWNVNSIRARIHNLA-AWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQ 62
           + +WNVN +RAR+H L   W+KE  PD++CLQETK  D+ FP E  + L YH        
Sbjct: 3   IISWNVNGLRARLHKLFLDWLKEEQPDVLCLQETKVADEQFPAELFEELGYHVFFHGAKS 62

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GVAILSK +P+++     G++ D + R I A F        + N+Y+P+G      
Sbjct: 63  KGYSGVAILSKVEPLDVRYGFGGEEHDEEGRVITAEFDG----FTVVNVYVPNGGSRGLE 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + K+ +     ++  + L+  +P+I  GD N+     D  NP   + +A FT E R+ 
Sbjct: 119 RLEYKLQFWDALFQYYEKELDAGKPVIICGDMNVAHTEIDLGNPKENKGNAGFTPEEREW 178

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   G  D  R  + DT   Y++WDY + +  +N+G RID+ ++S      +  + I
Sbjct: 179 FDELLEAGLVDTFRHFNPDTEGAYTWWDYRSGARDRNRGWRIDYFLVSEPLAERVVDSYI 238

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
           D++ RG    SDH P+++ LD
Sbjct: 239 DSEIRG----SDHCPIVLELD 255