RPSBLAST alignment for GI: 254780288 and conserved domain: TIGR00633
>gnl|CDD|161970 TIGR00633, xth, exodeoxyribonuclease III (xth). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Length = 255
Score = 221 bits (565), Expect = 2e-58
Identities = 89/261 (34%), Positives = 142/261 (54%), Gaps = 12/261 (4%)
Query: 6 VATWNVNSIRARIHNLA-AWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQ 62
+ +WNVN +RAR+H L W+KE PD++CLQETK D+ FP E + L YH
Sbjct: 3 IISWNVNGLRARLHKLFLDWLKEEQPDVLCLQETKVADEQFPAELFEELGYHVFFHGAKS 62
Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
K Y+GVAILSK +P+++ G++ D + R I A F + N+Y+P+G
Sbjct: 63 KGYSGVAILSKVEPLDVRYGFGGEEHDEEGRVITAEFDG----FTVVNVYVPNGGSRGLE 118
Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
+ + K+ + ++ + L+ +P+I GD N+ D NP + +A FT E R+
Sbjct: 119 RLEYKLQFWDALFQYYEKELDAGKPVIICGDMNVAHTEIDLGNPKENKGNAGFTPEEREW 178
Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
F +L G D R + DT Y++WDY + + +N+G RID+ ++S + + I
Sbjct: 179 FDELLEAGLVDTFRHFNPDTEGAYTWWDYRSGARDRNRGWRIDYFLVSEPLAERVVDSYI 238
Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
D++ RG SDH P+++ LD
Sbjct: 239 DSEIRG----SDHCPIVLELD 255