RPSBLAST alignment of GI: 254780288 and protein with PDBid: 1hd7
>1hd7_A DNA-(apurinic or apyrimidinic site) lyase; DNA repair, endonuclease, APE1, HAP1, REF-1; 1.95A {Homo sapiens} SCOP: d.151.1.1 PDB: 1e9n_A 2isi_A Length = 318
Score = 189 bits (481), Expect = 6e-49
Identities = 73/265 (27%), Positives = 122/265 (46%), Gaps = 17/265 (6%)
Query: 6 VATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSL----NYHIETC 60
+ +WNV+ +RA I W+KE PDI+CLQETK + P E + Y
Sbjct: 64 ICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPS 123
Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
++ Y+GV +LS+ P+++ + ++ D + R I A F + + Y+P+
Sbjct: 124 DKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF----DSFVLVTAYVPNAGRGL 179
Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
+ + L +PL+ GD N+ + D NP + +A FT + R
Sbjct: 180 VRLEYRQRWDEAFRKFL--KGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQER 237
Query: 181 QSFQKLQNM-GFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
Q F +L D+ R + +T + Y+FW Y ++ SKN G R+D+ +LS L
Sbjct: 238 QGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCD 297
Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
++I R SDH P+ + L +
Sbjct: 298 SKI----RSKALGSDHCPITLYLAL 318