RPSBLAST alignment of GI: 254780288 and protein with PDBid: 1hd7

>1hd7_A DNA-(apurinic or apyrimidinic site) lyase; DNA repair, endonuclease, APE1, HAP1, REF-1; 1.95A {Homo sapiens} SCOP: d.151.1.1 PDB: 1e9n_A 2isi_A Length = 318
 Score =  189 bits (481), Expect = 6e-49
 Identities = 73/265 (27%), Positives = 122/265 (46%), Gaps = 17/265 (6%)

Query: 6   VATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSL----NYHIETC 60
           + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y     
Sbjct: 64  ICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPS 123

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            ++ Y+GV +LS+  P+++   +  ++ D + R I A F     +  +   Y+P+     
Sbjct: 124 DKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF----DSFVLVTAYVPNAGRGL 179

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 +            + L   +PL+  GD N+  +  D  NP   + +A FT + R
Sbjct: 180 VRLEYRQRWDEAFRKFL--KGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQER 237

Query: 181 QSFQKLQNM-GFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           Q F +L       D+ R  + +T + Y+FW Y  ++ SKN G R+D+ +LS      L  
Sbjct: 238 QGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCD 297

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           ++I    R     SDH P+ + L +
Sbjct: 298 SKI----RSKALGSDHCPITLYLAL 318