RPSBLAST alignment of GI: 254780288 and protein with PDBid: 2jc4

>2jc4_A Exodeoxyribonuclease III; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: 1PE; 1.90A {Neisseria meningitidis} Length = 256

 Score =  166 bits (421), Expect = 4e-42
 Identities = 91/257 (35%), Positives = 133/257 (51%), Gaps = 4/257 (1%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65
           + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK+Y
Sbjct: 3   ITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQKTY 62

Query: 66  NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125
           NGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K+ 
Sbjct: 63  NGVAIVSRSVPQDVHFGLPALPDDPQRRVIAATV----SGVRVINVYCVNGEALDSPKFK 118

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185
            K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ FQ 
Sbjct: 119 YKEQWFAALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFQN 178

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245
           L ++G TD++R  H     Y+++DY    + +  G+RIDHI++SP   + L   R+D + 
Sbjct: 179 LLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDVRVDLET 238

Query: 246 RGWTKPSDHTPVIVSLD 262
           R   +PSDH PV    D
Sbjct: 239 RALERPSDHAPVTAEFD 255