RPSBLAST alignment of GI: 254780288 and SCOP domain: d1sr4b_

Alignment

 Score = 95.3 bits (235), Expect = 5e-21
 Identities = 37/291 (12%), Positives = 65/291 (22%), Gaps = 61/291 (20%)

Query: 1   MSVVTVATWNVNSIRA------RIHNLAAWIKENNPDIICLQETKTEDKNFPFE------ 48
           +S   VATWN+    A       I+       E   DI+ +QE  +   +          
Sbjct: 2   LSDFKVATWNLQGSSAVNESKWNINVRQLLSGEQGADILMVQEAGSLPSSAVRTSRVIQH 61

Query: 49  -----------------TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQ 91
                                  Y+       +   +AI+S+ Q  E         +   
Sbjct: 62  GGTPIEEYTWNLGTRSRPNMVYIYYSRLDVGANRVNLAIVSRRQADEAFIVHSDSSVLQS 121

Query: 92  ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
              +         T     ++        +      I     F   +S         +  
Sbjct: 122 RPAVGIRI----GTDVFFTVHALATGGSDAVSLIRNIFT--TFNSSSSPPERRVYSWMVV 175

Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211
           GD+N  P                            Q    ++       T    +     
Sbjct: 176 GDFNRAPA--------------------NLEVALRQEPAVSENTIIIAPTE--PTHRSGN 213

Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
              ++      +     + E       A +          SDH PV    D
Sbjct: 214 ILDYAILHDAHLPRREQARERI----GASLMLNQLRSQITSDHFPVSFVRD 260

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Cytolethal distending toxin subunit B
species: Haemophilus ducreyi [TaxId: 730]