RPSBLAST alignment of GI: 254780288 and SCOP domain: d1vyba_

Alignment
>d1vyba_ d.151.1.1 (A:) Endonuclease domain of LINE-1 reverse transcriptase homolog {Human (Homo sapiens) [TaxId: 9606]} Length = 236
 Score =  106 bits (265), Expect = 2e-24
 Identities = 56/262 (21%), Positives = 92/262 (35%), Gaps = 32/262 (12%)

Query: 2   SVVTVATWNVNSIRARI--HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T N+N + + I  H LA+WIK  +P + C+QET    ++     ++      + 
Sbjct: 4   SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 63

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 64  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K                         +  GD+N      D         D       
Sbjct: 121 RFIKQVLSDLQRDLDSHT-----------LIMGDFNTPLSTLDRSTRQKVNKD------T 163

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++S     +IDHI+ S    S     
Sbjct: 164 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYS-----KIDHIVGSKALLSKCKRT 218

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I          SDH+ + + L
Sbjct: 219 EII-----TNYLSDHSAIKLEL 235

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Endonuclease domain of LINE-1 reverse transcriptase homolog
species: Human (Homo sapiens) [TaxId: 9606]